RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 LRRD1A4D1F6 860 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 MROH6A6NGR9 719 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 PRR5-ARHGAP8B1AHC4 643 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 NDC80O14777 642 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 DAB1O75553 588 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 GRAP2O75791 330 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 DGKIO75912 1065 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 BEST1O76090 585 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 ZBED1O96006 694 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 F9P00740 461 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 ITGB1P05556 798 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 SP9P0CG40 484 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 RALAP11233 206 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 NME1P15531 152 aaKnown RBP5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 BDNFP23560 247 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 TNFRSF8P28908 595 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 TKTP29401 623 aaKnown RBP5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 FLT3P36888 993 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 SLC11A1P49279 550 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 TKTL1P51854 596 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 AIF1P55008 147 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 DRG2P55039 364 aaKnown RBP5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 DAOAP59103 153 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 VSNL1P62760 191 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 ARHGAP8P85298 464 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 DR1Q01658 176 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 ADIGQ0VDE8 80 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 GPS2Q13227 327 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 MRPL58Q14197 206 aaKnown RBP5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 KRT81Q14533 505 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 TAF5Q15542 800 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 CCNG2Q16589 344 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 CDO1Q16878 200 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 SLC25A52Q3SY17 297 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 CCDC14Q49A88 953 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 CTXN3Q4LDR2 81 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 ATP13A4Q4VNC1 1196 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 TFDP3Q5H9I0 405 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 RAB41Q5JT25 222 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 ERMARDQ5T6L9 678 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 AADACL2Q6P093 401 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 SCYL2Q6P3W7 929 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 FUT10Q6P4F1 479 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 EMBQ6PCB8 327 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 FBXL19Q6PCT2 694 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 VSTM1Q6UX27 236 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 MFSD7Q6UXD7 560 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 ANKS3Q6ZW76 656 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 RBM23Q86U06 439 aaKnown RBP5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 VSIG1Q86XK7 387 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 CEP57Q86XR8 500 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 PSTKQ8IV42 348 aaKnown RBP5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 DEFB106AQ8N104 65 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 EFHBQ8N7U6 833 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 PRELID2Q8N945 189 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 CMASQ8NFW8 434 aaPredicted RBP5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 VN1R2Q8NFZ6 395 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 SPPL2BQ8TCT7 592 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 GIPC2Q8TF65 315 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 C2orf15Q8WU43 125 aaKnown RBP5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 FAM172AQ8WUF8 416 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 IFT81Q8WYA0 676 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 CENPIQ92674 756 aaPredicted RBP5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 TOP1MTQ969P6 601 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 FAM149B1Q96BN6 582 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 MRRFQ96E11 262 aaKnown RBP5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 PEX11GQ96HA9 241 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 CFAP57Q96MR6 1250 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 SLITRK1Q96PX8 696 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 RTP3Q9BQQ7 232 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 ERP44Q9BS26 406 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 HEMGNQ9BXL5 484 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 ULBP1Q9BZM6 244 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 KLC2Q9H0B6 622 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 ZCWPW1Q9H0M4 648 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 PRDM16Q9HAZ2 1276 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 POPDC2Q9HBU9 364 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 NGRNQ9NPE2 291 aaKnown RBP5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 GDF3Q9NR23 364 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 PCSK1NQ9UHG2 260 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 AMACRQ9UHK6 382 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 CDH22Q9UJ99 828 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 NUDT5Q9UKK9 219 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 DRG1Q9Y295 367 aaKnown RBP5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 HS3ST3A1Q9Y663 406 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 TANC1Q9C0D5 1861 aa5.47□□□□□ -1.53
HMGXB4-208ENST00000498325 ATG2AQ2TAZ0 1938 aa5.46□□□□□ -1.53
HMGXB4-208ENST00000498325 hCG_1818297A0A087WSY0 165 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 SRRM3A6NNA2 597 aaPredicted RBP5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 ZNF487B1APH4 448 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 NT5C1B-RDH14C9J2C7 533 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 HHLA1C9JL84 531 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 C5orf67F2Z3F1 127 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 M0QYT0 321 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 TNFRSF10CO14798 259 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 MDM4O15151 490 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 TTI1O43156 1089 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 B4GALT3O60512 393 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 ENDOD1O94919 500 aa5.46□□□□□ -1.54
HMGXB4-208ENST00000498325 GAS8O95995 478 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms