RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 A0A1W2PQJ5 194 aa8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 C16orf96A6NNT2 1141 aa8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 A6NNZ2 444 aa8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 GOLGA6L19H0YKK7 550 aa8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 EEF2KO00418 725 aaKnown RBP8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 NEMP1O14524 444 aa8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 ENC1O14682 589 aa8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 TSPAN6O43657 245 aa8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 PRPSAP2O60256 369 aa8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 PAK4O96013 591 aaPredicted RBP8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 MYBL1P10243 752 aa8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 PTMSP20962 102 aa8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 NDST2P52849 883 aa8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 CLDN2P57739 230 aa8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 FGL2Q14314 439 aa8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 MYLK3Q32MK0 819 aa8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 CCDC157Q569K6 752 aa8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 TDRD12Q587J7 1177 aaKnown RBP8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 ATXN7L2Q5T6C5 722 aaPredicted RBP8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 GDPD4Q6W3E5 623 aa8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 CCNI2Q6ZMN8 369 aaPredicted RBP8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 GCNT7Q6ZNI0 430 aa8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 TMPRSS7Q7RTY8 843 aa8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 ABI3BPQ7Z7G0 1075 aa8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 GALNT15Q8N3T1 639 aa8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 ARFGAP1Q8N6T3 406 aa8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 OR13H1Q8NG92 308 aa8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 FAM174AQ8TBP5 190 aa8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 ARHGEF26Q96DR7 871 aa8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 KLHL32Q96NJ5 620 aa8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 PEBP4Q96S96 227 aa8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 TRIM7Q9C029 511 aa8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 ISCUQ9H1K1 167 aa8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 LRRC19Q9H756 370 aa8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 MRPL47Q9HD33 250 aaKnown RBP8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 MYO1AQ9UBC5 1043 aa8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 UBA2Q9UBT2 640 aaPredicted RBP8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 BZW2Q9Y6E2 419 aaKnown RBP8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 KMT2BQ9UMN6 2715 aaPredicted RBP8.6□□□□□ -1.03
HMGXB4-207ENST00000498212 ACACBO00763 2458 aa8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 ARHGAP42A6NI28 874 aa8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 DAPK3O43293 454 aa8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 SDC3O75056 442 aa8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 LRCH4O75427 683 aa8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 RFPL3O75679 317 aa8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 HOXB1P14653 301 aaPredicted RBP8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 MIPP30301 263 aa8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 PBX1P40424 430 aa8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 ABL2P42684 1182 aa8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 SGCGQ13326 291 aa8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 ACAP1Q15027 740 aa8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 CA9Q16790 459 aa8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 PPP6R3Q5H9R7 873 aaPredicted RBP8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 DHRS13Q6UX07 377 aa8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 KYAT3Q6YP21 454 aaKnown RBP8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 Q6ZSR6 202 aa8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 KANSL1Q7Z3B3 1105 aa8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 PTAR1Q7Z6K3 402 aaPredicted RBP8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 TTC7BQ86TV6 843 aa8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 VPS36Q86VN1 386 aa8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 DCP2Q8IU60 420 aaKnown RBP8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 PSTKQ8IV42 348 aaKnown RBP8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 NETO2Q8NC67 525 aa8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 SYN2Q92777 582 aaPredicted RBP8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 VOPP1Q96AW1 172 aa8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 IQCDQ96DY2 449 aa8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 CELF6Q96J87 481 aaKnown RBP8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 EXOC2Q96KP1 924 aa8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 LENG8Q96PV6 779 aaPredicted RBP8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 KCTD15Q96SI1 283 aaPredicted RBP8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 NCAPGQ9BPX3 1015 aa8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 C1QTNF2Q9BXJ5 285 aa8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 CPEB1Q9BZB8 566 aaKnown RBP8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 SLC39A8Q9C0K1 460 aa8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 PDFQ9HBH1 243 aa8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 LHX3Q9UBR4 397 aa8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 GGT7Q9UJ14 662 aa8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 ITM2BQ9Y287 266 aa8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 MFHAS1Q9Y4C4 1052 aa8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 PCDHGA1Q9Y5H4 931 aa8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 HS3ST3A1Q9Y663 406 aa8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 TPRP12270 2363 aaKnown RBP8.59□□□□□ -1.03
HMGXB4-207ENST00000498212 SPEGQ15772 3267 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 POM121BA6NF01 834 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 IGLON5A6NGN9 336 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 J3KR12 359 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 FPGTO14772 594 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 AREL1O15033 823 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 RAD51BO15315 384 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 PRAMEF11O60813 436 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 PIAS2O75928 621 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 SERPING1P05155 500 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 C1SP09871 688 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 CDK4P11802 303 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 CKMT2P17540 419 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 ERCC2P18074 760 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 DGKAP23743 735 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 PCK1P35558 622 aa8.58□□□□□ -1.04
HMGXB4-207ENST00000498212 RABIFP47224 123 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms