RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 TCAF1Q9Y4C2 921 aa13.21□□□□□ -0.3
GAPVD1-220ENST00000497580 GPR25O00155 361 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 RSL1D1O76021 490 aaKnown RBP13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 ALBP02768 609 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 MTHFD1P11586 935 aaKnown RBP13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 PSMA4P25789 261 aaKnown RBP13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 CHRNA5P30532 468 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 OXTRP30559 389 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 CYP51A1Q16850 503 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 INSCQ1MX18 579 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 ADCK1Q86TW2 530 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 ANKRD13BQ86YJ7 626 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 SAMD3Q8N6K7 520 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 GMCL1P1Q8NEA9 526 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 GLMNQ92990 594 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 CEP295NLQ96MC4 621 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 ZNF518BQ9C0D4 1074 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 CNGB3Q9NQW8 809 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 TBC1D14Q9P2M4 693 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 TLL2Q9Y6L7 1015 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 NEMP2A6NFY4 417 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 M0R3G1 203 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 NR5A2O00482 541 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 JRKO75564 520 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 POLBP06746 335 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 ATXN1P54253 815 aaKnown RBP13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 POU5F1BQ06416 359 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 GALNT2Q10471 571 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 USP10Q14694 798 aaKnown RBP13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 FAM209AQ5JX71 171 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 SAMD4BQ5PRF9 694 aaKnown RBP13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 RSBN1Q5VWQ0 802 aaPredicted RBP13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 LRCH3Q96II8 777 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 FEM1CQ96JP0 617 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 C9orf16Q9BUW7 83 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 SNRNP25Q9BV90 132 aaKnown RBP13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 ZNF341Q9BYN7 854 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 MRPL40Q9NQ50 206 aaKnown RBP13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 IARS2Q9NSE4 1012 aaKnown RBP13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 GDAP2Q9NXN4 497 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 CDK5RAP2Q96SN8 1893 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 AGRPO00253 132 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 DLGAP1O14490 977 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 UBDO15205 165 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 MSI1O43347 362 aaKnown RBP13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 IL18RAPO95256 599 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 ASS1P00966 412 aaKnown RBP13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 NCK1P16333 377 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 PGAM1P18669 254 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 PSMB4P28070 264 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 ZNF132P52740 706 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 INPP5AQ14642 412 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 OR52K1Q8NGK4 314 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 HDAC10Q969S8 669 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 HEXIM2Q96MH2 286 aaKnown RBP13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 TAAR1Q96RJ0 339 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 HMGXB4Q9UGU5 601 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 CARD8Q9Y2G2 431 aa13.2□□□□□ -0.3
GAPVD1-220ENST00000497580 CCDC162PA2VCL2 907 aa13.19□□□□□ -0.3
GAPVD1-220ENST00000497580 NADKO95544 446 aaPredicted RBP13.19□□□□□ -0.3
GAPVD1-220ENST00000497580 CAPGP40121 348 aa13.19□□□□□ -0.3
GAPVD1-220ENST00000497580 ACTR2P61160 394 aa13.19□□□□□ -0.3
GAPVD1-220ENST00000497580 KCNC4Q03721 635 aa13.19□□□□□ -0.3
GAPVD1-220ENST00000497580 TAZQ16635 292 aa13.19□□□□□ -0.3
GAPVD1-220ENST00000497580 C6orf10Q5SRN2 563 aa13.19□□□□□ -0.3
GAPVD1-220ENST00000497580 TMEM236Q5W0B7 351 aa13.19□□□□□ -0.3
GAPVD1-220ENST00000497580 CMTR2Q8IYT2 770 aaKnown RBP13.19□□□□□ -0.3
GAPVD1-220ENST00000497580 ANKFN1Q8N957 763 aa13.19□□□□□ -0.3
GAPVD1-220ENST00000497580 RAB2BQ8WUD1 216 aa13.19□□□□□ -0.3
GAPVD1-220ENST00000497580 DACH2Q96NX9 599 aa13.19□□□□□ -0.3
GAPVD1-220ENST00000497580 MUS81Q96NY9 551 aa13.19□□□□□ -0.3
GAPVD1-220ENST00000497580 OXSMQ9NWU1 459 aa13.19□□□□□ -0.3
GAPVD1-220ENST00000497580 SMPD3Q9NY59 655 aaPredicted RBP13.19□□□□□ -0.3
GAPVD1-220ENST00000497580 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.19□□□□□ -0.3
GAPVD1-220ENST00000497580 GPSM3Q9Y4H4 160 aa13.19□□□□□ -0.3
GAPVD1-220ENST00000497580 TCRBV3S1A0A5B6 114 aa13.19□□□□□ -0.3
GAPVD1-220ENST00000497580 SNPHO15079 494 aa13.19□□□□□ -0.3
GAPVD1-220ENST00000497580 ASNA1O43681 348 aa13.19□□□□□ -0.3
GAPVD1-220ENST00000497580 TPH1P17752 444 aa13.19□□□□□ -0.3
GAPVD1-220ENST00000497580 TRPC1P48995 793 aa13.19□□□□□ -0.3
GAPVD1-220ENST00000497580 AQP6Q13520 282 aa13.19□□□□□ -0.3
GAPVD1-220ENST00000497580 NDUFA5Q16718 116 aa13.19□□□□□ -0.3
GAPVD1-220ENST00000497580 GEN1Q17RS7 908 aa13.19□□□□□ -0.3
GAPVD1-220ENST00000497580 SLC36A3Q495N2 470 aa13.19□□□□□ -0.3
GAPVD1-220ENST00000497580 FUT11Q495W5 492 aa13.19□□□□□ -0.3
GAPVD1-220ENST00000497580 LIPMQ5VYY2 423 aa13.19□□□□□ -0.3
GAPVD1-220ENST00000497580 CHURC1Q8WUH1 139 aa13.19□□□□□ -0.3
GAPVD1-220ENST00000497580 SLC45A3Q96JT2 553 aa13.19□□□□□ -0.3
GAPVD1-220ENST00000497580 MTMR10Q9NXD2 777 aa13.19□□□□□ -0.3
GAPVD1-220ENST00000497580 XPR1Q9UBH6 696 aa13.19□□□□□ -0.3
GAPVD1-220ENST00000497580 DEAF1O75398 565 aaPredicted RBP13.18□□□□□ -0.3
GAPVD1-220ENST00000497580 PLA2G16P53816 162 aa13.18□□□□□ -0.3
GAPVD1-220ENST00000497580 MRPS15P82914 257 aaKnown RBP13.18□□□□□ -0.3
GAPVD1-220ENST00000497580 KRT76Q01546 638 aa13.18□□□□□ -0.3
GAPVD1-220ENST00000497580 ARHGEF16Q5VV41 709 aa13.18□□□□□ -0.3
GAPVD1-220ENST00000497580 BROXQ5VW32 411 aa13.18□□□□□ -0.3
GAPVD1-220ENST00000497580 SFRP1Q8N474 314 aa13.18□□□□□ -0.3
GAPVD1-220ENST00000497580 OR13F1Q8NGS4 319 aa13.18□□□□□ -0.3
GAPVD1-220ENST00000497580 ELMO1Q92556 727 aa13.18□□□□□ -0.3
GAPVD1-220ENST00000497580 MFSD3Q96ES6 412 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms