RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 CR2P20023 1033 aa14.38□□□□□ -0.11
VPS26A-209ENST00000497564 CES1P23141 567 aa14.38□□□□□ -0.11
VPS26A-209ENST00000497564 MAGEA4P43358 317 aa14.38□□□□□ -0.11
VPS26A-209ENST00000497564 PTPN5P54829 565 aa14.38□□□□□ -0.11
VPS26A-209ENST00000497564 SULT2A1Q06520 285 aa14.38□□□□□ -0.11
VPS26A-209ENST00000497564 PDIA2Q13087 525 aaKnown RBP14.38□□□□□ -0.11
VPS26A-209ENST00000497564 FZD5Q13467 585 aa14.38□□□□□ -0.11
VPS26A-209ENST00000497564 CYTH1Q15438 398 aa14.38□□□□□ -0.11
VPS26A-209ENST00000497564 PITRM1Q5JRX3 1037 aa14.38□□□□□ -0.11
VPS26A-209ENST00000497564 RALGPS1Q5JS13 557 aa14.38□□□□□ -0.11
VPS26A-209ENST00000497564 ALS2CLQ60I27 953 aa14.38□□□□□ -0.11
VPS26A-209ENST00000497564 NAPEPLDQ6IQ20 393 aa14.38□□□□□ -0.11
VPS26A-209ENST00000497564 LINC00523Q86TU6 105 aa14.38□□□□□ -0.11
VPS26A-209ENST00000497564 PRPF39Q86UA1 669 aaKnown RBP14.38□□□□□ -0.11
VPS26A-209ENST00000497564 YAF2Q8IY57 180 aa14.38□□□□□ -0.11
VPS26A-209ENST00000497564 IQCKQ8N0W5 287 aa14.38□□□□□ -0.11
VPS26A-209ENST00000497564 ZNF687Q8N1G0 1237 aa14.38□□□□□ -0.11
VPS26A-209ENST00000497564 ARRDC2Q8TBH0 407 aa14.38□□□□□ -0.11
VPS26A-209ENST00000497564 SHDQ96IW2 340 aa14.38□□□□□ -0.11
VPS26A-209ENST00000497564 TTC25Q96NG3 672 aa14.38□□□□□ -0.11
VPS26A-209ENST00000497564 XPO6Q96QU8 1125 aaKnown RBP14.38□□□□□ -0.11
VPS26A-209ENST00000497564 CINPQ9BW66 212 aaPredicted RBP14.38□□□□□ -0.11
VPS26A-209ENST00000497564 EPB41L4BQ9H329 900 aa14.38□□□□□ -0.11
VPS26A-209ENST00000497564 CDC42EP4Q9H3Q1 356 aaKnown RBP14.38□□□□□ -0.11
VPS26A-209ENST00000497564 SEMA4AQ9H3S1 761 aa14.38□□□□□ -0.11
VPS26A-209ENST00000497564 SAYSD1Q9NPB0 183 aa14.38□□□□□ -0.11
VPS26A-209ENST00000497564 CASS4Q9NQ75 786 aa14.38□□□□□ -0.11
VPS26A-209ENST00000497564 ABCB8Q9NUT2 735 aa14.38□□□□□ -0.11
VPS26A-209ENST00000497564 GTSE1Q9NYZ3 720 aa14.38□□□□□ -0.11
VPS26A-209ENST00000497564 GGA2Q9UJY4 613 aa14.38□□□□□ -0.11
VPS26A-209ENST00000497564 SLC27A6Q9Y2P4 619 aa14.38□□□□□ -0.11
VPS26A-209ENST00000497564 PIAS3Q9Y6X2 628 aa14.38□□□□□ -0.11
VPS26A-209ENST00000497564 CFAP54Q96N23 3096 aa14.38□□□□□ -0.11
VPS26A-209ENST00000497564 OTOL1A6NHN0 477 aaPredicted RBP14.37□□□□□ -0.11
VPS26A-209ENST00000497564 MUSKO15146 869 aa14.37□□□□□ -0.11
VPS26A-209ENST00000497564 RIPK2O43353 540 aa14.37□□□□□ -0.11
VPS26A-209ENST00000497564 SASH3O75995 380 aa14.37□□□□□ -0.11
VPS26A-209ENST00000497564 TMCC1O94876 653 aa14.37□□□□□ -0.11
VPS26A-209ENST00000497564 TTC4O95801 387 aa14.37□□□□□ -0.11
VPS26A-209ENST00000497564 MMP2P08253 660 aa14.37□□□□□ -0.11
VPS26A-209ENST00000497564 NUDT17P0C025 328 aa14.37□□□□□ -0.11
VPS26A-209ENST00000497564 ARSAP15289 507 aa14.37□□□□□ -0.11
VPS26A-209ENST00000497564 ADRA1AP35348 466 aa14.37□□□□□ -0.11
VPS26A-209ENST00000497564 SERPINH1P50454 418 aaKnown RBP14.37□□□□□ -0.11
VPS26A-209ENST00000497564 VASPP50552 380 aaPredicted RBP14.37□□□□□ -0.11
VPS26A-209ENST00000497564 NSUN2Q08J23 767 aaKnown RBP eCLIP14.37□□□□□ -0.11
VPS26A-209ENST00000497564 NIPAL4Q0D2K0 466 aa14.37□□□□□ -0.11
VPS26A-209ENST00000497564 GAB4Q2WGN9 574 aa14.37□□□□□ -0.11
VPS26A-209ENST00000497564 MSS51Q4VC12 460 aa14.37□□□□□ -0.11
VPS26A-209ENST00000497564 DNAJC21Q5F1R6 531 aaKnown RBP14.37□□□□□ -0.11
VPS26A-209ENST00000497564 CFAP58Q5T655 872 aa14.37□□□□□ -0.11
VPS26A-209ENST00000497564 TRIM68Q6AZZ1 485 aa14.37□□□□□ -0.11
VPS26A-209ENST00000497564 TXNDC11Q6PKC3 985 aa14.37□□□□□ -0.11
VPS26A-209ENST00000497564 KDELC1Q6UW63 502 aa14.37□□□□□ -0.11
VPS26A-209ENST00000497564 ETFBKMTQ8IXQ9 262 aa14.37□□□□□ -0.11
VPS26A-209ENST00000497564 AHI1Q8N157 1196 aa14.37□□□□□ -0.11
VPS26A-209ENST00000497564 WFIKKN2Q8TEU8 576 aa14.37□□□□□ -0.11
VPS26A-209ENST00000497564 ECT2Q9H8V3 914 aa14.37□□□□□ -0.11
VPS26A-209ENST00000497564 TRPV5Q9NQA5 729 aa14.37□□□□□ -0.11
VPS26A-209ENST00000497564 HPS4Q9NQG7 708 aa14.37□□□□□ -0.11
VPS26A-209ENST00000497564 NINJ2Q9NZG7 142 aa14.37□□□□□ -0.11
VPS26A-209ENST00000497564 NDRG2Q9UN36 371 aaKnown RBP14.37□□□□□ -0.11
VPS26A-209ENST00000497564 HS3ST2Q9Y278 367 aa14.37□□□□□ -0.11
VPS26A-209ENST00000497564 TTLL3Q9Y4R7 772 aa14.37□□□□□ -0.11
VPS26A-209ENST00000497564 TEX264Q9Y6I9 313 aa14.37□□□□□ -0.11
VPS26A-209ENST00000497564 RIF1Q5UIP0 2472 aaKnown RBP14.36□□□□□ -0.11
VPS26A-209ENST00000497564 F5H423 210 aaPredicted RBP14.36□□□□□ -0.11
VPS26A-209ENST00000497564 MT-CYBP00156 380 aaPredicted RBP14.36□□□□□ -0.11
VPS26A-209ENST00000497564 ABHD2P08910 425 aa14.36□□□□□ -0.11
VPS26A-209ENST00000497564 CISD3P0C7P0 127 aa14.36□□□□□ -0.11
VPS26A-209ENST00000497564 SKOR1P84550 965 aa14.36□□□□□ -0.11
VPS26A-209ENST00000497564 DSC2Q02487 901 aa14.36□□□□□ -0.11
VPS26A-209ENST00000497564 NR1H3Q13133 447 aa14.36□□□□□ -0.11
VPS26A-209ENST00000497564 FUT11Q495W5 492 aa14.36□□□□□ -0.11
VPS26A-209ENST00000497564 CCDC38Q502W7 563 aa14.36□□□□□ -0.11
VPS26A-209ENST00000497564 SYCP2LQ5T4T6 812 aa14.36□□□□□ -0.11
VPS26A-209ENST00000497564 ARMC3Q5W041 872 aa14.36□□□□□ -0.11
VPS26A-209ENST00000497564 LRIG3Q6UXM1 1119 aa14.36□□□□□ -0.11
VPS26A-209ENST00000497564 LEKR1Q6ZMV7 388 aa14.36□□□□□ -0.11
VPS26A-209ENST00000497564 ADIPOR2Q86V24 386 aa14.36□□□□□ -0.11
VPS26A-209ENST00000497564 ZBED8Q8IZ13 594 aa14.36□□□□□ -0.11
VPS26A-209ENST00000497564 CPA6Q8N4T0 437 aa14.36□□□□□ -0.11
VPS26A-209ENST00000497564 SPATA22Q8NHS9 363 aa14.36□□□□□ -0.11
VPS26A-209ENST00000497564 UBLCP1Q8WVY7 318 aaPredicted RBP14.36□□□□□ -0.11
VPS26A-209ENST00000497564 TTC17Q96AE7 1141 aa14.36□□□□□ -0.11
VPS26A-209ENST00000497564 ISG20Q96AZ6 181 aaKnown RBP14.36□□□□□ -0.11
VPS26A-209ENST00000497564 CHFRQ96EP1 664 aa14.36□□□□□ -0.11
VPS26A-209ENST00000497564 MRGPRX2Q96LB1 330 aa14.36□□□□□ -0.11
VPS26A-209ENST00000497564 SIGLEC10Q96LC7 697 aa14.36□□□□□ -0.11
VPS26A-209ENST00000497564 NUDCD1Q96RS6 583 aa14.36□□□□□ -0.11
VPS26A-209ENST00000497564 PRRX2Q99811 253 aa14.36□□□□□ -0.11
VPS26A-209ENST00000497564 SEMA3CQ99985 751 aa14.36□□□□□ -0.11
VPS26A-209ENST00000497564 TBL1YQ9BQ87 522 aa14.36□□□□□ -0.11
VPS26A-209ENST00000497564 EBF3Q9H4W6 596 aa14.36□□□□□ -0.11
VPS26A-209ENST00000497564 DNAJC17Q9NVM6 304 aaKnown RBP14.36□□□□□ -0.11
VPS26A-209ENST00000497564 LHX3Q9UBR4 397 aa14.36□□□□□ -0.11
VPS26A-209ENST00000497564 ACTL7AQ9Y615 435 aa14.36□□□□□ -0.11
VPS26A-209ENST00000497564 SCN8AQ9UQD0 1980 aa14.36□□□□□ -0.11
VPS26A-209ENST00000497564 EPOP01588 193 aa14.35□□□□□ -0.11
VPS26A-209ENST00000497564 CD86P42081 329 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms