RNA–Protein interactions for RNA: ENST00000497390.5

PCBP4-216, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-216ENST00000497390 PSMD13Q9UNM6 376 aa16.51■□□□□ 0.23
PCBP4-216ENST00000497390 CDYLQ9Y232 598 aa16.51■□□□□ 0.23
PCBP4-216ENST00000497390 SDHDO14521 159 aa16.51■□□□□ 0.23
PCBP4-216ENST00000497390 DNAJA2O60884 412 aa16.51■□□□□ 0.23
PCBP4-216ENST00000497390 THP07101 528 aa16.51■□□□□ 0.23
PCBP4-216ENST00000497390 ATPAF2Q8N5M1 289 aa16.51■□□□□ 0.23
PCBP4-216ENST00000497390 SMARCD1Q96GM5 515 aa16.51■□□□□ 0.23
PCBP4-216ENST00000497390 SLC45A3Q96JT2 553 aa16.51■□□□□ 0.23
PCBP4-216ENST00000497390 RIMS3Q9UJD0 308 aa16.51■□□□□ 0.23
PCBP4-216ENST00000497390 MAGEB16A2A368 324 aa16.5■□□□□ 0.23
PCBP4-216ENST00000497390 C17orf102A2RUQ5 167 aa16.5■□□□□ 0.23
PCBP4-216ENST00000497390 PAGE1O75459 146 aa16.5■□□□□ 0.23
PCBP4-216ENST00000497390 OR4Q2P0C623 313 aa16.5■□□□□ 0.23
PCBP4-216ENST00000497390 CHRM1P11229 460 aaPredicted RBP16.5■□□□□ 0.23
PCBP4-216ENST00000497390 STMN1P16949 149 aa16.5■□□□□ 0.23
PCBP4-216ENST00000497390 PMLP29590 882 aa16.5■□□□□ 0.23
PCBP4-216ENST00000497390 CACNB2Q08289 660 aaPredicted RBP16.5■□□□□ 0.23
PCBP4-216ENST00000497390 RALGDSQ12967 914 aa16.5■□□□□ 0.23
PCBP4-216ENST00000497390 PRKAA1Q13131 559 aa16.5■□□□□ 0.23
PCBP4-216ENST00000497390 FRG1Q14331 258 aaKnown RBP16.5■□□□□ 0.23
PCBP4-216ENST00000497390 PCID2Q5JVF3 399 aa16.5■□□□□ 0.23
PCBP4-216ENST00000497390 C6orf52Q5T4I8 152 aa16.5■□□□□ 0.23
PCBP4-216ENST00000497390 SDHAF4Q5VUM1 108 aa16.5■□□□□ 0.23
PCBP4-216ENST00000497390 DCLRE1AQ6PJP8 1040 aa16.5■□□□□ 0.23
PCBP4-216ENST00000497390 TRIM67Q6ZTA4 783 aa16.5■□□□□ 0.23
PCBP4-216ENST00000497390 ICA1LQ8NDH6 482 aa16.5■□□□□ 0.23
PCBP4-216ENST00000497390 OR9I1Q8NGQ6 314 aa16.5■□□□□ 0.23
PCBP4-216ENST00000497390 CASP10Q92851 521 aa16.5■□□□□ 0.23
PCBP4-216ENST00000497390 PHF21BQ96EK2 531 aa16.5■□□□□ 0.23
PCBP4-216ENST00000497390 MRGPRX2Q96LB1 330 aa16.5■□□□□ 0.23
PCBP4-216ENST00000497390 GLOD4Q9HC38 313 aa16.5■□□□□ 0.23
PCBP4-216ENST00000497390 CLIC5Q9NZA1 410 aa16.5■□□□□ 0.23
PCBP4-216ENST00000497390 APPL1Q9UKG1 709 aa16.5■□□□□ 0.23
PCBP4-216ENST00000497390 CACNG3O60359 315 aa16.5■□□□□ 0.23
PCBP4-216ENST00000497390 KCNC1P48547 511 aa16.5■□□□□ 0.23
PCBP4-216ENST00000497390 RAB27AP51159 221 aa16.5■□□□□ 0.23
PCBP4-216ENST00000497390 AIF1P55008 147 aa16.5■□□□□ 0.23
PCBP4-216ENST00000497390 CDC42EP1Q00587 391 aa16.5■□□□□ 0.23
PCBP4-216ENST00000497390 PAXIP1Q6ZW49 1069 aaPredicted RBP16.5■□□□□ 0.23
PCBP4-216ENST00000497390 RP9Q8TA86 221 aaKnown RBP16.5■□□□□ 0.23
PCBP4-216ENST00000497390 ANKRD49Q8WVL7 239 aa16.5■□□□□ 0.23
PCBP4-216ENST00000497390 CNBD2Q96M20 576 aa16.5■□□□□ 0.23
PCBP4-216ENST00000497390 SEMA6AQ9H2E6 1030 aa16.5■□□□□ 0.23
PCBP4-216ENST00000497390 OCEL1Q9H607 264 aa16.5■□□□□ 0.23
PCBP4-216ENST00000497390 AGO3Q9H9G7 860 aaKnown RBP16.5■□□□□ 0.23
PCBP4-216ENST00000497390 ATP6AP2A0A1C7CYW4 349 aa16.49■□□□□ 0.23
PCBP4-216ENST00000497390 OR51F1A6NGY5 319 aa16.49■□□□□ 0.23
PCBP4-216ENST00000497390 ATP6AP2O75787 350 aa16.49■□□□□ 0.23
PCBP4-216ENST00000497390 CRTAMO95727 393 aa16.49■□□□□ 0.23
PCBP4-216ENST00000497390 ADRA1AP35348 466 aa16.49■□□□□ 0.23
PCBP4-216ENST00000497390 LHX1P48742 406 aa16.49■□□□□ 0.23
PCBP4-216ENST00000497390 SULT2A1Q06520 285 aa16.49■□□□□ 0.23
PCBP4-216ENST00000497390 GRM2Q14416 872 aa16.49■□□□□ 0.23
PCBP4-216ENST00000497390 PRPSAP1Q14558 356 aa16.49■□□□□ 0.23
PCBP4-216ENST00000497390 USP50Q70EL3 339 aaPredicted RBP16.49■□□□□ 0.23
PCBP4-216ENST00000497390 FCRL2Q96LA5 508 aaPredicted RBP16.49■□□□□ 0.23
PCBP4-216ENST00000497390 KLHL5Q96PQ7 755 aa16.49■□□□□ 0.23
PCBP4-216ENST00000497390 SLC39A3Q9BRY0 314 aa16.49■□□□□ 0.23
PCBP4-216ENST00000497390 IGSF5Q9NSI5 407 aa16.49■□□□□ 0.23
PCBP4-216ENST00000497390 RBM22Q9NW64 420 aaKnown RBP eCLIP16.49■□□□□ 0.23
PCBP4-216ENST00000497390 TCAF1Q9Y4C2 921 aa16.49■□□□□ 0.23
PCBP4-216ENST00000497390 TRPM7Q96QT4 1865 aa16.49■□□□□ 0.23
PCBP4-216ENST00000497390 RNASEH2AO75792 299 aaKnown RBP16.49■□□□□ 0.23
PCBP4-216ENST00000497390 B3GAT3O94766 335 aa16.49■□□□□ 0.23
PCBP4-216ENST00000497390 CSPG5O95196 566 aa16.49■□□□□ 0.23
PCBP4-216ENST00000497390 FGFR3P22607 806 aa16.49■□□□□ 0.23
PCBP4-216ENST00000497390 UPP1Q16831 310 aa16.49■□□□□ 0.23
PCBP4-216ENST00000497390 CLEC6AQ6EIG7 209 aa16.49■□□□□ 0.23
PCBP4-216ENST00000497390 LAYNQ6UX15 382 aa16.49■□□□□ 0.23
PCBP4-216ENST00000497390 TFAP2DQ7Z6R9 452 aa16.49■□□□□ 0.23
PCBP4-216ENST00000497390 CPSF7Q8N684 471 aaKnown RBP16.49■□□□□ 0.23
PCBP4-216ENST00000497390 METTL25Q8N6Q8 603 aa16.49■□□□□ 0.23
PCBP4-216ENST00000497390 ATP6V1E2Q96A05 226 aa16.49■□□□□ 0.23
PCBP4-216ENST00000497390 NMUR1Q9HB89 426 aa16.49■□□□□ 0.23
PCBP4-216ENST00000497390 OSER1Q9NX31 292 aa16.49■□□□□ 0.23
PCBP4-216ENST00000497390 ACOT8O14734 319 aa16.48■□□□□ 0.23
PCBP4-216ENST00000497390 MTSS1O43312 755 aa16.48■□□□□ 0.23
PCBP4-216ENST00000497390 MGEA5O60502 916 aa16.48■□□□□ 0.23
PCBP4-216ENST00000497390 NELFEP18615 380 aaKnown RBP16.48■□□□□ 0.23
PCBP4-216ENST00000497390 YWHAQP27348 245 aa16.48■□□□□ 0.23
PCBP4-216ENST00000497390 CHN2P52757 468 aa16.48■□□□□ 0.23
PCBP4-216ENST00000497390 YBX1P67809 324 aaKnown RBP16.48■□□□□ 0.23
PCBP4-216ENST00000497390 PTPRCAPQ14761 206 aa16.48■□□□□ 0.23
PCBP4-216ENST00000497390 PCBP1Q15365 356 aaKnown RBP eCLIP16.48■□□□□ 0.23
PCBP4-216ENST00000497390 C11orf91Q3C1V1 193 aa16.48■□□□□ 0.23
PCBP4-216ENST00000497390 PITRM1Q5JRX3 1037 aa16.48■□□□□ 0.23
PCBP4-216ENST00000497390 INTS6LQ5JSJ4 861 aaKnown RBP16.48■□□□□ 0.23
PCBP4-216ENST00000497390 BTBD8Q5XKL5 378 aa16.48■□□□□ 0.23
PCBP4-216ENST00000497390 CD300LGQ6UXG3 332 aa16.48■□□□□ 0.23
PCBP4-216ENST00000497390 PIM3Q86V86 326 aa16.48■□□□□ 0.23
PCBP4-216ENST00000497390 APLFQ8IW19 511 aaPredicted RBP16.48■□□□□ 0.23
PCBP4-216ENST00000497390 CNTN4Q8IWV2 1026 aa16.48■□□□□ 0.23
PCBP4-216ENST00000497390 ST13P4Q8IZP2 240 aaPredicted RBP16.48■□□□□ 0.23
PCBP4-216ENST00000497390 SREK1Q8WXA9 508 aaKnown RBP16.48■□□□□ 0.23
PCBP4-216ENST00000497390 NMD3Q96D46 503 aaKnown RBP16.48■□□□□ 0.23
PCBP4-216ENST00000497390 TSNARE1Q96NA8 513 aa16.48■□□□□ 0.23
PCBP4-216ENST00000497390 VAT1Q99536 393 aa16.48■□□□□ 0.23
PCBP4-216ENST00000497390 SH3GL3Q99963 347 aa16.48■□□□□ 0.23
PCBP4-216ENST00000497390 FBRSL1Q9HCM7 1045 aaKnown RBP16.48■□□□□ 0.23
PCBP4-216ENST00000497390 CSNK1G1Q9HCP0 422 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms