RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 LRRC73Q5JTD7 316 aa14.49□□□□□ -0.09
VTI1A-209ENST00000496445 KYAT3Q6YP21 454 aaKnown RBP14.49□□□□□ -0.09
VTI1A-209ENST00000496445 KDM7AQ6ZMT4 941 aa14.49□□□□□ -0.09
VTI1A-209ENST00000496445 CYP4V2Q6ZWL3 525 aaPredicted RBP14.49□□□□□ -0.09
VTI1A-209ENST00000496445 PTAR1Q7Z6K3 402 aaPredicted RBP14.49□□□□□ -0.09
VTI1A-209ENST00000496445 ZNF354CQ86Y25 554 aa14.49□□□□□ -0.09
VTI1A-209ENST00000496445 UMODL1-AS1Q8N2C9 162 aa14.49□□□□□ -0.09
VTI1A-209ENST00000496445 LRIG1Q96JA1 1093 aa14.49□□□□□ -0.09
VTI1A-209ENST00000496445 BMFQ96LC9 184 aa14.49□□□□□ -0.09
VTI1A-209ENST00000496445 KLHL32Q96NJ5 620 aa14.49□□□□□ -0.09
VTI1A-209ENST00000496445 CALN1Q9BXU9 219 aa14.49□□□□□ -0.09
VTI1A-209ENST00000496445 CATSPERBQ9H7T0 1116 aa14.49□□□□□ -0.09
VTI1A-209ENST00000496445 PDFQ9HBH1 243 aa14.49□□□□□ -0.09
VTI1A-209ENST00000496445 UCKL1Q9NWZ5 548 aa14.49□□□□□ -0.09
VTI1A-209ENST00000496445 AIPL1Q9NZN9 384 aa14.49□□□□□ -0.09
VTI1A-209ENST00000496445 LHX3Q9UBR4 397 aa14.49□□□□□ -0.09
VTI1A-209ENST00000496445 AP4E1Q9UPM8 1137 aa14.49□□□□□ -0.09
VTI1A-209ENST00000496445 LRP4O75096 1905 aa14.49□□□□□ -0.09
VTI1A-209ENST00000496445 ADAMTS20P59510 1910 aa14.49□□□□□ -0.09
VTI1A-209ENST00000496445 COL27A1Q8IZC6 1860 aaPredicted RBP14.48□□□□□ -0.09
VTI1A-209ENST00000496445 POM121BA6NF01 834 aa14.48□□□□□ -0.09
VTI1A-209ENST00000496445 A6NNZ2 444 aa14.48□□□□□ -0.09
VTI1A-209ENST00000496445 DDX3XO00571 662 aaKnown RBP eCLIP14.48□□□□□ -0.092e-9■■□□□ 14.2
VTI1A-209ENST00000496445 FGF10O15520 208 aaPredicted RBP14.48□□□□□ -0.09
VTI1A-209ENST00000496445 PAK4O96013 591 aaPredicted RBP14.48□□□□□ -0.09
VTI1A-209ENST00000496445 GIMD1P0DJR0 217 aa14.48□□□□□ -0.09
VTI1A-209ENST00000496445 DGKAP23743 735 aa14.48□□□□□ -0.09
VTI1A-209ENST00000496445 YBEYP58557 167 aaPredicted RBP14.48□□□□□ -0.09
VTI1A-209ENST00000496445 TPI1P60174 286 aa14.48□□□□□ -0.09
VTI1A-209ENST00000496445 PARP15Q460N3 678 aa14.48□□□□□ -0.09
VTI1A-209ENST00000496445 INO80DQ53TQ3 878 aaPredicted RBP14.48□□□□□ -0.09
VTI1A-209ENST00000496445 TPRG1LQ5T0D9 272 aa14.48□□□□□ -0.09
VTI1A-209ENST00000496445 PPP1R2P3Q6NXS1 205 aa14.48□□□□□ -0.09
VTI1A-209ENST00000496445 Q6ZSR6 202 aa14.48□□□□□ -0.09
VTI1A-209ENST00000496445 CASKIN2Q8WXE0 1202 aa14.48□□□□□ -0.09
VTI1A-209ENST00000496445 RAB7BQ96AH8 199 aa14.48□□□□□ -0.09
VTI1A-209ENST00000496445 FEM1CQ96JP0 617 aa14.48□□□□□ -0.09
VTI1A-209ENST00000496445 GDAP1L1Q96MZ0 367 aa14.48□□□□□ -0.09
VTI1A-209ENST00000496445 KCTD15Q96SI1 283 aaPredicted RBP14.48□□□□□ -0.09
VTI1A-209ENST00000496445 KLF6Q99612 283 aaPredicted RBP14.48□□□□□ -0.09
VTI1A-209ENST00000496445 C1QTNF2Q9BXJ5 285 aa14.48□□□□□ -0.09
VTI1A-209ENST00000496445 OSBPL1AQ9BXW6 950 aa14.48□□□□□ -0.09
VTI1A-209ENST00000496445 CCDC86Q9H6F5 360 aaKnown RBP14.48□□□□□ -0.09
VTI1A-209ENST00000496445 LRRC19Q9H756 370 aa14.48□□□□□ -0.09
VTI1A-209ENST00000496445 PARVAQ9NVD7 372 aa14.48□□□□□ -0.09
VTI1A-209ENST00000496445 KLHL11Q9NVR0 708 aa14.48□□□□□ -0.09
VTI1A-209ENST00000496445 HS3ST3A1Q9Y663 406 aa14.48□□□□□ -0.09
VTI1A-209ENST00000496445 TMEM191CA6NGB0 347 aa14.47□□□□□ -0.09
VTI1A-209ENST00000496445 IGLON5A6NGN9 336 aa14.47□□□□□ -0.09
VTI1A-209ENST00000496445 AREL1O15033 823 aa14.47□□□□□ -0.09
VTI1A-209ENST00000496445 INSIG1O15503 277 aa14.47□□□□□ -0.09
VTI1A-209ENST00000496445 TSPAN6O43657 245 aa14.47□□□□□ -0.09
VTI1A-209ENST00000496445 SIGLEC6O43699 453 aa14.47□□□□□ -0.09
VTI1A-209ENST00000496445 PIAS2O75928 621 aa14.47□□□□□ -0.09
VTI1A-209ENST00000496445 POP4O95707 220 aaKnown RBP14.47□□□□□ -0.09
VTI1A-209ENST00000496445 IGSF6O95976 241 aa14.47□□□□□ -0.09
VTI1A-209ENST00000496445 C1SP09871 688 aa14.47□□□□□ -0.09
VTI1A-209ENST00000496445 HTR7P34969 479 aa14.47□□□□□ -0.09
VTI1A-209ENST00000496445 RHOAP61586 193 aa14.47□□□□□ -0.09
VTI1A-209ENST00000496445 NR1I3Q14994 352 aa14.47□□□□□ -0.09
VTI1A-209ENST00000496445 CYTH1Q15438 398 aa14.47□□□□□ -0.09
VTI1A-209ENST00000496445 FILIP1LQ4L180 1135 aa14.47□□□□□ -0.09
VTI1A-209ENST00000496445 GDPD4Q6W3E5 623 aa14.47□□□□□ -0.09
VTI1A-209ENST00000496445 TMPRSS12Q86WS5 348 aa14.47□□□□□ -0.09
VTI1A-209ENST00000496445 CELF6Q96J87 481 aaKnown RBP14.47□□□□□ -0.09
VTI1A-209ENST00000496445 EXOC2Q96KP1 924 aa14.47□□□□□ -0.09
VTI1A-209ENST00000496445 LENG8Q96PV6 779 aaPredicted RBP14.47□□□□□ -0.09
VTI1A-209ENST00000496445 SNRNP25Q9BV90 132 aaKnown RBP14.47□□□□□ -0.09
VTI1A-209ENST00000496445 CNOT8Q9UFF9 292 aaKnown RBP14.47□□□□□ -0.09
VTI1A-209ENST00000496445 IGSF10Q6WRI0 2623 aa14.46□□□□□ -0.09
VTI1A-209ENST00000496445 SYCE3A1L190 88 aa14.46□□□□□ -0.09
VTI1A-209ENST00000496445 TRABD2BA6NFA1 517 aa14.46□□□□□ -0.09
VTI1A-209ENST00000496445 J3KR12 359 aa14.46□□□□□ -0.09
VTI1A-209ENST00000496445 EEF2KO00418 725 aaKnown RBP14.46□□□□□ -0.09
VTI1A-209ENST00000496445 FTLP02792 175 aaPredicted RBP14.46□□□□□ -0.09
VTI1A-209ENST00000496445 GZMAP12544 262 aa14.46□□□□□ -0.09
VTI1A-209ENST00000496445 SKILP12757 684 aa14.46□□□□□ -0.09
VTI1A-209ENST00000496445 CKMT2P17540 419 aa14.46□□□□□ -0.09
VTI1A-209ENST00000496445 ITIH2P19823 946 aa14.46□□□□□ -0.09
VTI1A-209ENST00000496445 ACP1P24666 158 aa14.46□□□□□ -0.09
VTI1A-209ENST00000496445 KLHL30Q0D2K2 578 aa14.46□□□□□ -0.09
VTI1A-209ENST00000496445 FZD2Q14332 565 aa14.46□□□□□ -0.09
VTI1A-209ENST00000496445 ZNF542PQ5EBM4 170 aa14.46□□□□□ -0.09
VTI1A-209ENST00000496445 HES3Q5TGS1 186 aa14.46□□□□□ -0.09
VTI1A-209ENST00000496445 HGSNATQ68CP4 663 aa14.46□□□□□ -0.09
VTI1A-209ENST00000496445 ZSCAN30Q86W11 494 aa14.46□□□□□ -0.09
VTI1A-209ENST00000496445 ARHGAP12Q8IWW6 846 aa14.46□□□□□ -0.09
VTI1A-209ENST00000496445 DENND6BQ8NEG7 585 aa14.46□□□□□ -0.09
VTI1A-209ENST00000496445 OR4C6Q8NH72 309 aa14.46□□□□□ -0.09
VTI1A-209ENST00000496445 FAM174AQ8TBP5 190 aa14.46□□□□□ -0.09
VTI1A-209ENST00000496445 FNIP1Q8TF40 1166 aa14.46□□□□□ -0.09
VTI1A-209ENST00000496445 ZNF653Q96CK0 615 aa14.46□□□□□ -0.09
VTI1A-209ENST00000496445 DHX35Q9H5Z1 703 aaKnown RBP14.46□□□□□ -0.09
VTI1A-209ENST00000496445 CBX8Q9HC52 389 aa14.46□□□□□ -0.09
VTI1A-209ENST00000496445 UBA2Q9UBT2 640 aaPredicted RBP14.46□□□□□ -0.09
VTI1A-209ENST00000496445 DKK4Q9UBT3 224 aa14.46□□□□□ -0.09
VTI1A-209ENST00000496445 PCSK1NQ9UHG2 260 aa14.46□□□□□ -0.09
VTI1A-209ENST00000496445 KLF15Q9UIH9 416 aa14.46□□□□□ -0.09
VTI1A-209ENST00000496445 MFHAS1Q9Y4C4 1052 aa14.46□□□□□ -0.09
VTI1A-209ENST00000496445 LY6G6EA0A0G2JKS1 128 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms