RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 TRAV19A0A0A6YYK7 116 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 H0Y626 953 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 SNX3O60493 162 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 MOSPD3O75425 235 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 LUC7L3O95232 432 aaKnown RBP13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 VAPBO95292 243 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 ALADP13716 330 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 CR2P20023 1033 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 CRHR1P34998 444 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 ABCG1P45844 678 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 LIMK2P53671 638 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 EPHA5P54756 1037 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 RFTN1Q14699 578 aaPredicted RBP13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 SEPT7Q16181 437 aaKnown RBP13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 FSTL4Q6MZW2 842 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 ZNF783Q6ZMS7 281 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 CACNA2D3Q8IZS8 1091 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 SHKBP1Q8TBC3 707 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 ZNF75CPQ92670 426 aaPredicted RBP13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 PTPRN2Q92932 1015 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 FEM1AQ9BSK4 669 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 SLCO1B3Q9NPD5 702 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 MAN1C1Q9NR34 630 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 LAMA3Q16787 3333 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 LEFTY2O00292 366 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 GABRB3P28472 473 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 UBE3AQ05086 875 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 SEPT6Q14141 434 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 PPM1JQ5JR12 505 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 LINGO4Q6UY18 593 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 FAM47EQ6ZV65 393 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 CNTN4Q8IWV2 1026 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 DCLK2Q8N568 766 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 ACVR1CQ8NER5 493 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 RIN3Q8TB24 985 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 ACMSDQ8TDX5 336 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 ISL2Q96A47 359 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 ALG14Q96F25 216 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 ATXN7L3BQ96GX2 97 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 FEM1CQ96JP0 617 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 EXOC2Q96KP1 924 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 TRIB3Q96RU7 358 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 RANBP9Q96S59 729 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 CINPQ9BW66 212 aaPredicted RBP13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 NSRP1Q9H0G5 558 aaKnown RBP13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 DNMT3BQ9UBC3 853 aaKnown RBP13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 GGA2Q9UJY4 613 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 CCL26Q9Y258 94 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 MTO1Q9Y2Z2 717 aaKnown RBP13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 RWDD3Q9Y3V2 267 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 HEATR9A2RTY3 570 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 MROH6A6NGR9 719 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 EPOP01588 193 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 EPCAMP16422 314 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 SPRP35270 261 aaPredicted RBP13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 GMPRP36959 345 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 MAGEA12P43365 314 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 SERPINB4P48594 390 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 PDE1BQ01064 536 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 CDK18Q07002 472 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 C9orf50Q5SZB4 431 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 RNF135Q8IUD6 432 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 DENND6AQ8IWF6 608 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 GCNAQ96QF7 691 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 PRKD2Q9BZL6 878 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 GGT7Q9UJ14 662 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 LSM7Q9UK45 103 aaKnown RBP13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 CLEC4EQ9ULY5 219 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 SH3BP1Q9Y3L3 701 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 ANAPC1Q9H1A4 1944 aa13.82□□□□□ -0.2
SPTBN1-205ENST00000496323 CLASP2O75122 1294 aaKnown RBP13.81□□□□□ -0.2
SPTBN1-205ENST00000496323 SIN3BO75182 1162 aa13.81□□□□□ -0.2
SPTBN1-205ENST00000496323 AHSGP02765 367 aa13.81□□□□□ -0.2
SPTBN1-205ENST00000496323 SERPINF2P08697 491 aa13.81□□□□□ -0.2
SPTBN1-205ENST00000496323 CSKP41240 450 aa13.81□□□□□ -0.2
SPTBN1-205ENST00000496323 SCNN1BP51168 640 aa13.81□□□□□ -0.2
SPTBN1-205ENST00000496323 SLC5A9Q2M3M2 681 aa13.81□□□□□ -0.2
SPTBN1-205ENST00000496323 TSTD2Q5T7W7 516 aa13.81□□□□□ -0.2
SPTBN1-205ENST00000496323 ARMC3Q5W041 872 aa13.81□□□□□ -0.2
SPTBN1-205ENST00000496323 KIAA0930Q6ICG6 404 aaPredicted RBP13.81□□□□□ -0.2
SPTBN1-205ENST00000496323 CMC1Q7Z7K0 106 aa13.81□□□□□ -0.2
SPTBN1-205ENST00000496323 BBS5Q8N3I7 341 aa13.81□□□□□ -0.2
SPTBN1-205ENST00000496323 CPXM2Q8N436 756 aa13.81□□□□□ -0.2
SPTBN1-205ENST00000496323 TDRD5Q8NAT2 981 aaKnown RBP13.81□□□□□ -0.2
SPTBN1-205ENST00000496323 CCDC197Q8NCU1 140 aa13.81□□□□□ -0.2
SPTBN1-205ENST00000496323 OR13J1Q8NGT2 312 aa13.81□□□□□ -0.2
SPTBN1-205ENST00000496323 LRRC8CQ8TDW0 803 aa13.81□□□□□ -0.2
SPTBN1-205ENST00000496323 PITPNM3Q9BZ71 974 aa13.81□□□□□ -0.2
SPTBN1-205ENST00000496323 IQCGQ9H095 443 aaKnown RBP13.81□□□□□ -0.2
SPTBN1-205ENST00000496323 SNX15Q9NRS6 342 aa13.81□□□□□ -0.2
SPTBN1-205ENST00000496323 ARHGAP26Q9UNA1 814 aa13.81□□□□□ -0.2
SPTBN1-205ENST00000496323 INSIG1O15503 277 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 LDB2O43679 373 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 PRKCGP05129 697 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 CA3P07451 260 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 PFKLP17858 780 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 CSE1LP55060 971 aaKnown RBP13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 CTBP1Q13363 440 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 GALNT3Q14435 633 aa13.8□□□□□ -0.2
SPTBN1-205ENST00000496323 TEAD2Q15562 447 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms