RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 CYFIP2Q96F07 1278 aa9.04□□□□□ -0.96
GARNL3-219ENST00000495172 CDK5RAP3Q96JB5 506 aa9.04□□□□□ -0.96
GARNL3-219ENST00000495172 NUDT9Q9BW91 350 aa9.04□□□□□ -0.96
GARNL3-219ENST00000495172 ASPSCR1Q9BZE9 553 aa9.04□□□□□ -0.96
GARNL3-219ENST00000495172 RPH3AQ9Y2J0 694 aaPredicted RBP9.04□□□□□ -0.96
GARNL3-219ENST00000495172 PCDHGB7Q9Y5F8 929 aa9.04□□□□□ -0.96
GARNL3-219ENST00000495172 ENDOD1O94919 500 aa9.03□□□□□ -0.96
GARNL3-219ENST00000495172 GCNT3O95395 438 aa9.03□□□□□ -0.96
GARNL3-219ENST00000495172 DLGAP3O95886 979 aa9.03□□□□□ -0.96
GARNL3-219ENST00000495172 LDHAP00338 332 aaKnown RBP9.03□□□□□ -0.96
GARNL3-219ENST00000495172 SLFN14P0C7P3 912 aa9.03□□□□□ -0.96
GARNL3-219ENST00000495172 GARTP22102 1010 aa9.03□□□□□ -0.96
GARNL3-219ENST00000495172 PSMA5P28066 241 aa9.03□□□□□ -0.96
GARNL3-219ENST00000495172 CHRNA3P32297 505 aa9.03□□□□□ -0.96
GARNL3-219ENST00000495172 LIMK2P53671 638 aa9.03□□□□□ -0.96
GARNL3-219ENST00000495172 PER3P56645 1201 aa9.03□□□□□ -0.96
GARNL3-219ENST00000495172 RPS21P63220 83 aaKnown RBP9.03□□□□□ -0.96
GARNL3-219ENST00000495172 TRPC3Q13507 836 aa9.03□□□□□ -0.96
GARNL3-219ENST00000495172 TRIM29Q14134 588 aa9.03□□□□□ -0.96
GARNL3-219ENST00000495172 CRTC2Q53ET0 693 aaPredicted RBP9.03□□□□□ -0.96
GARNL3-219ENST00000495172 FAM26FQ5R3K3 315 aa9.03□□□□□ -0.96
GARNL3-219ENST00000495172 MPP7Q5T2T1 576 aa9.03□□□□□ -0.96
GARNL3-219ENST00000495172 FOXR2Q6PJQ5 311 aa9.03□□□□□ -0.96
GARNL3-219ENST00000495172 DTHD1Q6ZMT9 781 aa9.03□□□□□ -0.96
GARNL3-219ENST00000495172 SYCP3Q8IZU3 236 aa9.03□□□□□ -0.96
GARNL3-219ENST00000495172 CRYBG2Q8N1P7 616 aa9.03□□□□□ -0.96
GARNL3-219ENST00000495172 GALNT6Q8NCL4 622 aa9.03□□□□□ -0.96
GARNL3-219ENST00000495172 FDCSPQ8NFU4 85 aa9.03□□□□□ -0.96
GARNL3-219ENST00000495172 PATE1Q8WXA2 126 aa9.03□□□□□ -0.96
GARNL3-219ENST00000495172 HVCN1Q96D96 273 aa9.03□□□□□ -0.96
GARNL3-219ENST00000495172 PDXPQ96GD0 296 aa9.03□□□□□ -0.96
GARNL3-219ENST00000495172 ACCSQ96QU6 501 aa9.03□□□□□ -0.96
GARNL3-219ENST00000495172 CDK5RAP1Q96SZ6 601 aaKnown RBP9.03□□□□□ -0.96
GARNL3-219ENST00000495172 EFHD1Q9BUP0 239 aa9.03□□□□□ -0.96
GARNL3-219ENST00000495172 RAB34Q9BZG1 259 aa9.03□□□□□ -0.96
GARNL3-219ENST00000495172 ULBP1Q9BZM6 244 aa9.03□□□□□ -0.96
GARNL3-219ENST00000495172 TNKS2Q9H2K2 1166 aa9.03□□□□□ -0.96
GARNL3-219ENST00000495172 ST6GALNAC4Q9H4F1 302 aa9.03□□□□□ -0.96
GARNL3-219ENST00000495172 MRPL44Q9H9J2 332 aaKnown RBP9.03□□□□□ -0.96
GARNL3-219ENST00000495172 PDRG1Q9NUG6 133 aa9.03□□□□□ -0.96
GARNL3-219ENST00000495172 HBS1LQ9Y450 684 aaKnown RBP9.03□□□□□ -0.96
GARNL3-219ENST00000495172 TMEM184BQ9Y519 407 aaPredicted RBP9.03□□□□□ -0.96
GARNL3-219ENST00000495172 FADS3Q9Y5Q0 445 aa9.03□□□□□ -0.96
GARNL3-219ENST00000495172 CYP46A1Q9Y6A2 500 aa9.03□□□□□ -0.96
GARNL3-219ENST00000495172 ANKRD36A6QL64 1941 aa9.03□□□□□ -0.96
GARNL3-219ENST00000495172 ZNF233A6NK53 670 aa9.02□□□□□ -0.97
GARNL3-219ENST00000495172 GRID2O43424 1007 aa9.02□□□□□ -0.97
GARNL3-219ENST00000495172 SMAD6O43541 496 aaKnown RBP9.02□□□□□ -0.97
GARNL3-219ENST00000495172 MOCS3O95396 460 aa9.02□□□□□ -0.97
GARNL3-219ENST00000495172 MOCS2O96007 188 aaPredicted RBP9.02□□□□□ -0.97
GARNL3-219ENST00000495172 FAM163BP0C2L3 166 aa9.02□□□□□ -0.97
GARNL3-219ENST00000495172 THRAP10827 490 aa9.02□□□□□ -0.97
GARNL3-219ENST00000495172 NNMTP40261 264 aa9.02□□□□□ -0.97
GARNL3-219ENST00000495172 ABL2P42684 1182 aa9.02□□□□□ -0.97
GARNL3-219ENST00000495172 TLE4Q04727 773 aa9.02□□□□□ -0.97
GARNL3-219ENST00000495172 SGCGQ13326 291 aa9.02□□□□□ -0.97
GARNL3-219ENST00000495172 ART3Q13508 389 aa9.02□□□□□ -0.97
GARNL3-219ENST00000495172 CDSNQ15517 529 aa9.02□□□□□ -0.97
GARNL3-219ENST00000495172 ZNF699Q32M78 642 aa9.02□□□□□ -0.97
GARNL3-219ENST00000495172 ANO6Q4KMQ2 910 aa9.02□□□□□ -0.97
GARNL3-219ENST00000495172 MACC1Q6ZN28 852 aa9.02□□□□□ -0.97
GARNL3-219ENST00000495172 ZNF761Q86XN6 746 aaPredicted RBP9.02□□□□□ -0.97
GARNL3-219ENST00000495172 GKN2Q86XP6 184 aa9.02□□□□□ -0.97
GARNL3-219ENST00000495172 LGI2Q8N0V4 545 aa9.02□□□□□ -0.97
GARNL3-219ENST00000495172 FSTL5Q8N475 847 aaPredicted RBP9.02□□□□□ -0.97
GARNL3-219ENST00000495172 CCDC112Q8NEF3 446 aa9.02□□□□□ -0.97
GARNL3-219ENST00000495172 OR2A12Q8NGT7 310 aa9.02□□□□□ -0.97
GARNL3-219ENST00000495172 PLEKHO2Q8TD55 490 aa9.02□□□□□ -0.97
GARNL3-219ENST00000495172 C1QTNF2Q9BXJ5 285 aa9.02□□□□□ -0.97
GARNL3-219ENST00000495172 CBX8Q9HC52 389 aa9.02□□□□□ -0.97
GARNL3-219ENST00000495172 DLL4Q9NR61 685 aa9.02□□□□□ -0.97
GARNL3-219ENST00000495172 AJAP1Q9UKB5 411 aaPredicted RBP9.02□□□□□ -0.97
GARNL3-219ENST00000495172 YJEFN3A6XGL0 299 aa9.01□□□□□ -0.97
GARNL3-219ENST00000495172 B4E171 279 aa9.01□□□□□ -0.97
GARNL3-219ENST00000495172 E7ENQ6 273 aa9.01□□□□□ -0.97
GARNL3-219ENST00000495172 M0QYT0 321 aa9.01□□□□□ -0.97
GARNL3-219ENST00000495172 PIK3R2O00459 728 aa9.01□□□□□ -0.97
GARNL3-219ENST00000495172 E2F3O00716 465 aa9.01□□□□□ -0.97
GARNL3-219ENST00000495172 ATP9BO43861 1147 aa9.01□□□□□ -0.97
GARNL3-219ENST00000495172 DPM1O60762 260 aa9.01□□□□□ -0.97
GARNL3-219ENST00000495172 LRCH4O75427 683 aa9.01□□□□□ -0.97
GARNL3-219ENST00000495172 CREG1O75629 220 aa9.01□□□□□ -0.97
GARNL3-219ENST00000495172 VNN1O95497 513 aa9.01□□□□□ -0.97
GARNL3-219ENST00000495172 ALPIP09923 528 aa9.01□□□□□ -0.97
GARNL3-219ENST00000495172 NUDT7P0C024 238 aa9.01□□□□□ -0.97
GARNL3-219ENST00000495172 ADRB3P13945 408 aa9.01□□□□□ -0.97
GARNL3-219ENST00000495172 ITIH2P19823 946 aa9.01□□□□□ -0.97
GARNL3-219ENST00000495172 RRM1P23921 792 aa9.01□□□□□ -0.97
GARNL3-219ENST00000495172 SSTR2P30874 369 aa9.01□□□□□ -0.97
GARNL3-219ENST00000495172 TSPAN7P41732 249 aa9.01□□□□□ -0.97
GARNL3-219ENST00000495172 KIR3DL1P43629 444 aa9.01□□□□□ -0.97
GARNL3-219ENST00000495172 IRAK1P51617 712 aa9.01□□□□□ -0.97
GARNL3-219ENST00000495172 TKTL1P51854 596 aa9.01□□□□□ -0.97
GARNL3-219ENST00000495172 ZNF445P59923 1031 aa9.01□□□□□ -0.97
GARNL3-219ENST00000495172 ORC2Q13416 577 aaPredicted RBP9.01□□□□□ -0.97
GARNL3-219ENST00000495172 ZNF630Q2M218 657 aaPredicted RBP9.01□□□□□ -0.97
GARNL3-219ENST00000495172 VWA2Q5GFL6 755 aa9.01□□□□□ -0.97
GARNL3-219ENST00000495172 ZNF667Q5HYK9 610 aa9.01□□□□□ -0.97
GARNL3-219ENST00000495172 MS4A13Q5J8X5 152 aa9.01□□□□□ -0.97
GARNL3-219ENST00000495172 FAM69BQ5VUD6 431 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms