RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 PTPN2P17706 415 aa16.5■□□□□ 0.23
CBX4-204ENST00000495122 RPA3P35244 121 aaPredicted RBP16.5■□□□□ 0.23
CBX4-204ENST00000495122 HADHAP40939 763 aa16.5■□□□□ 0.23
CBX4-204ENST00000495122 NBL1P41271 181 aa16.5■□□□□ 0.23
CBX4-204ENST00000495122 GRIA1P42261 906 aa16.5■□□□□ 0.23
CBX4-204ENST00000495122 SLC11A2P49281 568 aa16.5■□□□□ 0.23
CBX4-204ENST00000495122 LRRC14Q15048 493 aa16.5■□□□□ 0.23
CBX4-204ENST00000495122 SLC14A2Q15849 920 aa16.5■□□□□ 0.23
CBX4-204ENST00000495122 HECTD3Q5T447 861 aa16.5■□□□□ 0.23
CBX4-204ENST00000495122 POTEHQ6S545 545 aa16.5■□□□□ 0.23
CBX4-204ENST00000495122 MPP5Q8N3R9 675 aa16.5■□□□□ 0.23
CBX4-204ENST00000495122 DNAAF3Q8N9W5 541 aa16.5■□□□□ 0.23
CBX4-204ENST00000495122 DTWD2Q8NBA8 298 aa16.5■□□□□ 0.23
CBX4-204ENST00000495122 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.5■□□□□ 0.23
CBX4-204ENST00000495122 RAB3IL1Q8TBN0 382 aa16.5■□□□□ 0.23
CBX4-204ENST00000495122 LRRC8CQ8TDW0 803 aa16.5■□□□□ 0.23
CBX4-204ENST00000495122 CERS2Q96G23 380 aa16.5■□□□□ 0.23
CBX4-204ENST00000495122 OXNAD1Q96HP4 312 aaPredicted RBP16.5■□□□□ 0.23
CBX4-204ENST00000495122 CPNE1Q99829 537 aa16.5■□□□□ 0.23
CBX4-204ENST00000495122 DDX50Q9BQ39 737 aaKnown RBP16.5■□□□□ 0.23
CBX4-204ENST00000495122 KXD1Q9BQD3 176 aa16.5■□□□□ 0.23
CBX4-204ENST00000495122 IQCGQ9H095 443 aaKnown RBP16.5■□□□□ 0.23
CBX4-204ENST00000495122 SLC25A51Q9H1U9 297 aa16.5■□□□□ 0.23
CBX4-204ENST00000495122 TRPM5Q9NZQ8 1165 aa16.5■□□□□ 0.23
CBX4-204ENST00000495122 SOX13Q9UN79 622 aa16.5■□□□□ 0.23
CBX4-204ENST00000495122 RRP15Q9Y3B9 282 aaKnown RBP16.5■□□□□ 0.23
CBX4-204ENST00000495122 STARD13Q9Y3M8 1113 aa16.5■□□□□ 0.23
CBX4-204ENST00000495122 MYO18AQ92614 2054 aaKnown RBP16.49■□□□□ 0.23
CBX4-204ENST00000495122 COPEO14579 308 aa16.49■□□□□ 0.23
CBX4-204ENST00000495122 SNX3O60493 162 aa16.49■□□□□ 0.23
CBX4-204ENST00000495122 GFRA3O60609 400 aa16.49■□□□□ 0.23
CBX4-204ENST00000495122 SPAG7O75391 227 aa16.49■□□□□ 0.23
CBX4-204ENST00000495122 DHRS4L1P0CG22 281 aa16.49■□□□□ 0.23
CBX4-204ENST00000495122 TAC1P20366 129 aa16.49■□□□□ 0.23
CBX4-204ENST00000495122 ALDH1A3P47895 512 aa16.49■□□□□ 0.23
CBX4-204ENST00000495122 PAPOLAP51003 745 aaKnown RBP16.49■□□□□ 0.23
CBX4-204ENST00000495122 CSE1LP55060 971 aaKnown RBP16.49■□□□□ 0.23
CBX4-204ENST00000495122 IL10RBQ08334 325 aa16.49■□□□□ 0.23
CBX4-204ENST00000495122 QPCTQ16769 361 aa16.49■□□□□ 0.23
CBX4-204ENST00000495122 RABGAP1LQ5R372 815 aa16.49■□□□□ 0.23
CBX4-204ENST00000495122 GRTP1Q5TC63 336 aa16.49■□□□□ 0.23
CBX4-204ENST00000495122 C14orf80Q86SX3 495 aa16.49■□□□□ 0.23
CBX4-204ENST00000495122 TEX26Q8N6G2 289 aa16.49■□□□□ 0.23
CBX4-204ENST00000495122 CNTD1Q8N815 330 aa16.49■□□□□ 0.23
CBX4-204ENST00000495122 OR52K1Q8NGK4 314 aa16.49■□□□□ 0.23
CBX4-204ENST00000495122 MRRFQ96E11 262 aaKnown RBP16.49■□□□□ 0.23
CBX4-204ENST00000495122 TBL1YQ9BQ87 522 aa16.49■□□□□ 0.23
CBX4-204ENST00000495122 KIFC1Q9BW19 673 aa16.49■□□□□ 0.23
CBX4-204ENST00000495122 CEP41Q9BYV8 373 aa16.49■□□□□ 0.23
CBX4-204ENST00000495122 TXNDC16Q9P2K2 825 aa16.49■□□□□ 0.23
CBX4-204ENST00000495122 RPS6KL1Q9Y6S9 549 aa16.49■□□□□ 0.23
CBX4-204ENST00000495122 WDR87Q6ZQQ6 2873 aa16.48■□□□□ 0.23
CBX4-204ENST00000495122 CXorf49A8MYA2 514 aaPredicted RBP16.48■□□□□ 0.23
CBX4-204ENST00000495122 F5H5T6 163 aa16.48■□□□□ 0.23
CBX4-204ENST00000495122 KLF11O14901 512 aa16.48■□□□□ 0.23
CBX4-204ENST00000495122 GP5P40197 560 aa16.48■□□□□ 0.23
CBX4-204ENST00000495122 HARS2P49590 506 aaKnown RBP16.48■□□□□ 0.23
CBX4-204ENST00000495122 CORO7P57737 925 aa16.48■□□□□ 0.23
CBX4-204ENST00000495122 STARD6P59095 220 aa16.48■□□□□ 0.23
CBX4-204ENST00000495122 MTM1Q13496 603 aa16.48■□□□□ 0.23
CBX4-204ENST00000495122 ANGPT1Q15389 498 aa16.48■□□□□ 0.23
CBX4-204ENST00000495122 PCID2Q5JVF3 399 aa16.48■□□□□ 0.23
CBX4-204ENST00000495122 PDPK2PQ6A1A2 396 aa16.48■□□□□ 0.23
CBX4-204ENST00000495122 FBXL22Q6P050 247 aa16.48■□□□□ 0.23
CBX4-204ENST00000495122 TRMT10BQ6PF06 316 aaKnown RBP16.48■□□□□ 0.23
CBX4-204ENST00000495122 LVRNQ6Q4G3 990 aa16.48■□□□□ 0.23
CBX4-204ENST00000495122 CCDC121Q6ZUS5 278 aa16.48■□□□□ 0.23
CBX4-204ENST00000495122 SPATA21Q7Z572 469 aa16.48■□□□□ 0.23
CBX4-204ENST00000495122 ITIH5Q86UX2 942 aa16.48■□□□□ 0.23
CBX4-204ENST00000495122 GBP7Q8N8V2 638 aaPredicted RBP16.48■□□□□ 0.23
CBX4-204ENST00000495122 GABPB2Q8TAK5 448 aaPredicted RBP16.48■□□□□ 0.23
CBX4-204ENST00000495122 GDAP1Q8TB36 358 aa16.48■□□□□ 0.23
CBX4-204ENST00000495122 ZNF398Q8TD17 642 aa16.48■□□□□ 0.23
CBX4-204ENST00000495122 ATP2A3Q93084 1043 aa16.48■□□□□ 0.23
CBX4-204ENST00000495122 ISL2Q96A47 359 aa16.48■□□□□ 0.23
CBX4-204ENST00000495122 CORO1BQ9BR76 489 aa16.48■□□□□ 0.23
CBX4-204ENST00000495122 KDM4CQ9H3R0 1056 aa16.48■□□□□ 0.23
CBX4-204ENST00000495122 RABEP2Q9H5N1 569 aa16.48■□□□□ 0.23
CBX4-204ENST00000495122 NOL6Q9H6R4 1146 aaKnown RBP16.48■□□□□ 0.23
CBX4-204ENST00000495122 ACTR5Q9H9F9 607 aaPredicted RBP16.48■□□□□ 0.23
CBX4-204ENST00000495122 KIF9Q9HAQ2 790 aa16.48■□□□□ 0.23
CBX4-204ENST00000495122 ARNT2Q9HBZ2 717 aa16.48■□□□□ 0.23
CBX4-204ENST00000495122 SMYD2Q9NRG4 433 aa16.48■□□□□ 0.23
CBX4-204ENST00000495122 RBM22Q9NW64 420 aaKnown RBP eCLIP16.48■□□□□ 0.237e-7■■■□□ 14.8
CBX4-204ENST00000495122 GDE1Q9NZC3 331 aa16.48■□□□□ 0.23
CBX4-204ENST00000495122 DLGAP2Q9P1A6 1054 aa16.48■□□□□ 0.23
CBX4-204ENST00000495122 ZFATQ9P243 1243 aa16.48■□□□□ 0.23
CBX4-204ENST00000495122 ZNF212Q9UDV6 495 aa16.48■□□□□ 0.23
CBX4-204ENST00000495122 NUDT5Q9UKK9 219 aa16.48■□□□□ 0.23
CBX4-204ENST00000495122 YIPF1Q9Y548 306 aa16.48■□□□□ 0.23
CBX4-204ENST00000495122 ASB3Q9Y575 518 aa16.48■□□□□ 0.23
CBX4-204ENST00000495122 SHROOM3Q8TF72 1996 aa16.47■□□□□ 0.23
CBX4-204ENST00000495122 RIF1Q5UIP0 2472 aaKnown RBP16.47■□□□□ 0.23
CBX4-204ENST00000495122 ZNF840PA6NDX5 716 aa16.47■□□□□ 0.23
CBX4-204ENST00000495122 STK25O00506 426 aa16.47■□□□□ 0.23
CBX4-204ENST00000495122 NRG2O14511 850 aaPredicted RBP16.47■□□□□ 0.23
CBX4-204ENST00000495122 ACSL4O60488 711 aa16.47■□□□□ 0.23
CBX4-204ENST00000495122 RAMP2O60895 175 aa16.47■□□□□ 0.23
CBX4-204ENST00000495122 ECI2O75521 394 aa16.47■□□□□ 0.23
CBX4-204ENST00000495122 TACR2P21452 398 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms