RNA–Protein interactions for RNA: ENST00000494891.5

NEPRO-222, Transcript of nucleolus and neural progenitor protein, human

TSL 4

Gene NEPRO, Length 547 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-222	ENST00000494891	DNAAF5	Q86Y56	855 aa		10.43	□□□□□ -0.74
NEPRO-222	ENST00000494891	ARHGAP12	Q8IWW6	846 aa		10.43	□□□□□ -0.74
NEPRO-222	ENST00000494891	DENND6B	Q8NEG7	585 aa		10.43	□□□□□ -0.74
NEPRO-222	ENST00000494891	ZNF599	Q96NL3	588 aa		10.43	□□□□□ -0.74
NEPRO-222	ENST00000494891	CAMK1G	Q96NX5	476 aa		10.43	□□□□□ -0.74
NEPRO-222	ENST00000494891	TUBGCP5	Q96RT8	1024 aa		10.43	□□□□□ -0.74
NEPRO-222	ENST00000494891	KCTD15	Q96SI1	283 aa	Predicted RBP	10.43	□□□□□ -0.74
NEPRO-222	ENST00000494891	TM6SF2	Q9BZW4	377 aa		10.43	□□□□□ -0.74
NEPRO-222	ENST00000494891	THAP2	Q9H0W7	228 aa		10.43	□□□□□ -0.74
NEPRO-222	ENST00000494891	ZWILCH	Q9H900	591 aa		10.43	□□□□□ -0.74
NEPRO-222	ENST00000494891	TOR4A	Q9NXH8	423 aa		10.43	□□□□□ -0.74
NEPRO-222	ENST00000494891	CWC15	Q9P013	229 aa	Known RBP	10.43	□□□□□ -0.74
NEPRO-222	ENST00000494891	RCOR3	Q9P2K3	495 aa	Predicted RBP	10.43	□□□□□ -0.74
NEPRO-222	ENST00000494891	UVRAG	Q9P2Y5	699 aa		10.43	□□□□□ -0.74
NEPRO-222	ENST00000494891	LHX3	Q9UBR4	397 aa		10.43	□□□□□ -0.74
NEPRO-222	ENST00000494891	PCSK1N	Q9UHG2	260 aa		10.43	□□□□□ -0.74
NEPRO-222	ENST00000494891	IP6K2	Q9UHH9	426 aa		10.43	□□□□□ -0.74
NEPRO-222	ENST00000494891	APOBEC2	Q9Y235	224 aa	Known RBP	10.43	□□□□□ -0.74
NEPRO-222	ENST00000494891	MSRB2	Q9Y3D2	182 aa		10.43	□□□□□ -0.74
NEPRO-222	ENST00000494891	USP24	Q9UPU5	2620 aa		10.43	□□□□□ -0.74
NEPRO-222	ENST00000494891	TMEM8B	A6NDV4	472 aa		10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	TOR1B	O14657	336 aa		10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	SPINT1	O43278	529 aa		10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	FTH1P19	P0C7X4	201 aa		10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	CDK4	P11802	303 aa		10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	IL1R2	P27930	398 aa		10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	EPHA8	P29322	1005 aa	Predicted RBP	10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	MAT2A	P31153	395 aa	Known RBP	10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	AKT2	P31751	481 aa		10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	DNA2	P51530	1060 aa		10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	RHOA	P61586	193 aa		10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	SLC25A11	Q02978	314 aa	Known RBP	10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	IL10RB	Q08334	325 aa		10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	FOXC1	Q12948	553 aa		10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	AGER	Q15109	404 aa		10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	CYTH1	Q15438	398 aa		10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	POM121L1P	Q3SYA9	428 aa		10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	GDPD4	Q6W3E5	623 aa		10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	POLN	Q7Z5Q5	900 aa		10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	LRRC49	Q8IUZ0	686 aa		10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	OR8K1	Q8NGG5	319 aa		10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	RHBDD1	Q8TEB9	315 aa		10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	SETD7	Q8WTS6	366 aa	Known RBP	10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	TSC1	Q92574	1164 aa		10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	GATA6	Q92908	595 aa		10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	KLHDC7B	Q96G42	594 aa		10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	ZNF641	Q96N77	438 aa	Predicted RBP	10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	SCNM1	Q9BWG6	230 aa		10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	SLC17A9	Q9BYT1	436 aa		10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	SLC39A8	Q9C0K1	460 aa		10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	TSPY26P	Q9H489	355 aa		10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	ZDHHC6	Q9H6R6	413 aa		10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	KLHL11	Q9NVR0	708 aa		10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	GPATCH2L	Q9NWQ4	482 aa		10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	MYO1A	Q9UBC5	1043 aa		10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	UBA2	Q9UBT2	640 aa	Predicted RBP	10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	PCDHGA1	Q9Y5H4	931 aa		10.42	□□□□□ -0.74
NEPRO-222	ENST00000494891	ZZEF1	O43149	2961 aa		10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	FREM2	Q5SZK8	3169 aa		10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	DMXL2	Q8TDJ6	3036 aa		10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891		H3BRJ5	948 aa		10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891		J3KR12	359 aa		10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	MYO1F	O00160	1098 aa		10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	KRIT1	O00522	736 aa		10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	KCNK3	O14649	394 aa		10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	RIOK3	O14730	519 aa	Known RBP	10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	PCDH8	O95206	1070 aa		10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	UGT2B4	P06133	528 aa		10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	PROS1	P07225	676 aa		10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	C1S	P09871	688 aa		10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	RARA	P10276	462 aa		10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	ARL4A	P40617	200 aa		10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	ABL2	P42684	1182 aa		10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	PAPOLA	P51003	745 aa	Known RBP	10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	FGL2	Q14314	439 aa		10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	CCDC122	Q5T0U0	273 aa		10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	SEL1L3	Q68CR1	1132 aa		10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	BRAT1	Q6PJG6	821 aa		10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	SARM1	Q6SZW1	724 aa		10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	KYAT3	Q6YP21	454 aa	Known RBP	10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	GCNT7	Q6ZNI0	430 aa		10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	SLCO6A1	Q86UG4	719 aa		10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	VSTM4	Q8IW00	320 aa		10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	NPW	Q8N729	165 aa		10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	KDF1	Q8NAX2	398 aa	Predicted RBP	10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	CPLX3	Q8WVH0	158 aa		10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	ECHDC3	Q96DC8	303 aa		10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	KLHL32	Q96NJ5	620 aa		10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	CSPG4P5	Q96PW8	444 aa		10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	PSKH2	Q96QS6	385 aa		10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	KLF6	Q99612	283 aa	Predicted RBP	10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	NUP85	Q9BW27	656 aa		10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	ANAPC7	Q9UJX3	599 aa		10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	BTBD3	Q9Y2F9	522 aa		10.41	□□□□□ -0.74
NEPRO-222	ENST00000494891	WDFY3	Q8IZQ1	3526 aa		10.4	□□□□□ -0.74
NEPRO-222	ENST00000494891	PTPRB	P23467	1997 aa		10.4	□□□□□ -0.74
NEPRO-222	ENST00000494891	CFAP69	A5D8W1	941 aa		10.4	□□□□□ -0.74
NEPRO-222	ENST00000494891		A6NNZ2	444 aa		10.4	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms