RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 FNDC3AQ9Y2H6 1198 aaKnown RBP17.89■□□□□ 0.45
HDAC4-211ENST00000494800 FADS3Q9Y5Q0 445 aa17.89■□□□□ 0.45
HDAC4-211ENST00000494800 PI4KAP42356 2102 aa17.89■□□□□ 0.45
HDAC4-211ENST00000494800 NUMA1Q14980 2115 aa17.89■□□□□ 0.45
HDAC4-211ENST00000494800 TLR4O00206 839 aa17.88■□□□□ 0.45
HDAC4-211ENST00000494800 GIPC1O14908 333 aa17.88■□□□□ 0.45
HDAC4-211ENST00000494800 SLC31A1O15431 190 aa17.88■□□□□ 0.45
HDAC4-211ENST00000494800 SH3BP5O60239 455 aa17.88■□□□□ 0.45
HDAC4-211ENST00000494800 HNRNPA2B1P22626 353 aaKnown RBP17.88■□□□□ 0.45
HDAC4-211ENST00000494800 MAN1A1P33908 653 aa17.88■□□□□ 0.45
HDAC4-211ENST00000494800 GJC1P36383 396 aa17.88■□□□□ 0.45
HDAC4-211ENST00000494800 ARRB1P49407 418 aaPredicted RBP17.88■□□□□ 0.45
HDAC4-211ENST00000494800 RENBPP51606 427 aa17.88■□□□□ 0.45
HDAC4-211ENST00000494800 TBX2Q13207 712 aaPredicted RBP17.88■□□□□ 0.45
HDAC4-211ENST00000494800 SGCGQ13326 291 aa17.88■□□□□ 0.45
HDAC4-211ENST00000494800 CYTH1Q15438 398 aa17.88■□□□□ 0.45
HDAC4-211ENST00000494800 ZNF423Q2M1K9 1284 aa17.88■□□□□ 0.45
HDAC4-211ENST00000494800 ZNF284Q2VY69 593 aa17.88■□□□□ 0.45
HDAC4-211ENST00000494800 TMCO4Q5TGY1 634 aa17.88■□□□□ 0.45
HDAC4-211ENST00000494800 TTC7BQ86TV6 843 aa17.88■□□□□ 0.45
HDAC4-211ENST00000494800 ARHGAP12Q8IWW6 846 aa17.88■□□□□ 0.45
HDAC4-211ENST00000494800 BBS5Q8N3I7 341 aa17.88■□□□□ 0.45
HDAC4-211ENST00000494800 NPWQ8N729 165 aa17.88■□□□□ 0.45
HDAC4-211ENST00000494800 KCTD6Q8NC69 237 aa17.88■□□□□ 0.45
HDAC4-211ENST00000494800 FAM174AQ8TBP5 190 aa17.88■□□□□ 0.45
HDAC4-211ENST00000494800 EXOC2Q96KP1 924 aa17.88■□□□□ 0.45
HDAC4-211ENST00000494800 ZNF599Q96NL3 588 aa17.88■□□□□ 0.45
HDAC4-211ENST00000494800 ELF4Q99607 663 aaPredicted RBP17.88■□□□□ 0.45
HDAC4-211ENST00000494800 CPEB1Q9BZB8 566 aaKnown RBP17.88■□□□□ 0.45
HDAC4-211ENST00000494800 PCDH18Q9HCL0 1135 aa17.88■□□□□ 0.45
HDAC4-211ENST00000494800 SPTLC3Q9NUV7 552 aa17.88■□□□□ 0.45
HDAC4-211ENST00000494800 LHX3Q9UBR4 397 aa17.88■□□□□ 0.45
HDAC4-211ENST00000494800 IPO11Q9UI26 975 aaKnown RBP17.88■□□□□ 0.45
HDAC4-211ENST00000494800 A0A1W2PR77 199 aa17.87■□□□□ 0.45
HDAC4-211ENST00000494800 H0Y8X5 98 aa17.87■□□□□ 0.45
HDAC4-211ENST00000494800 RNF103O00237 685 aa17.87■□□□□ 0.45
HDAC4-211ENST00000494800 AMPD1P23109 780 aa17.87■□□□□ 0.45
HDAC4-211ENST00000494800 ARHGAP25P42331 645 aa17.87■□□□□ 0.45
HDAC4-211ENST00000494800 SUOXP51687 545 aa17.87■□□□□ 0.45
HDAC4-211ENST00000494800 NXPH1P58417 271 aa17.87■□□□□ 0.45
HDAC4-211ENST00000494800 SIM1P81133 766 aaPredicted RBP17.87■□□□□ 0.45
HDAC4-211ENST00000494800 PDK2Q15119 407 aa17.87■□□□□ 0.45
HDAC4-211ENST00000494800 ATPAF2Q8N5M1 289 aa17.87■□□□□ 0.45
HDAC4-211ENST00000494800 PAF1Q8N7H5 531 aa17.87■□□□□ 0.45
HDAC4-211ENST00000494800 SLC35G2Q8TBE7 412 aa17.87■□□□□ 0.45
HDAC4-211ENST00000494800 HCAR2Q8TDS4 363 aa17.87■□□□□ 0.45
HDAC4-211ENST00000494800 KLHDC7BQ96G42 594 aa17.87■□□□□ 0.45
HDAC4-211ENST00000494800 ZNF641Q96N77 438 aaPredicted RBP17.87■□□□□ 0.45
HDAC4-211ENST00000494800 TUBGCP5Q96RT8 1024 aa17.87■□□□□ 0.45
HDAC4-211ENST00000494800 CALN1Q9BXU9 219 aa17.87■□□□□ 0.45
HDAC4-211ENST00000494800 LUC7LQ9NQ29 371 aaKnown RBP17.87■□□□□ 0.45
HDAC4-211ENST00000494800 DKK3Q9UBP4 350 aa17.87■□□□□ 0.45
HDAC4-211ENST00000494800 SEPT3Q9UH03 358 aa17.87■□□□□ 0.45
HDAC4-211ENST00000494800 INTUQ9ULD6 942 aa17.87■□□□□ 0.45
HDAC4-211ENST00000494800 ADAMTS9Q9P2N4 1935 aa17.87■□□□□ 0.45
HDAC4-211ENST00000494800 CHD5Q8TDI0 1954 aa17.87■□□□□ 0.45
HDAC4-211ENST00000494800 TMEM110-MUSTN1A8MSY1 372 aa17.86■□□□□ 0.45
HDAC4-211ENST00000494800 PCDHGA12O60330 932 aa17.86■□□□□ 0.45
HDAC4-211ENST00000494800 WNT1P04628 370 aa17.86■□□□□ 0.45
HDAC4-211ENST00000494800 PRLRP16471 622 aa17.86■□□□□ 0.45
HDAC4-211ENST00000494800 SERPINA4P29622 427 aa17.86■□□□□ 0.45
HDAC4-211ENST00000494800 GRK6P43250 576 aa17.86■□□□□ 0.45
HDAC4-211ENST00000494800 CSNK1DP48730 415 aa17.86■□□□□ 0.45
HDAC4-211ENST00000494800 ZNF235Q14590 738 aa17.86■□□□□ 0.45
HDAC4-211ENST00000494800 MESDQ14696 234 aa17.86■□□□□ 0.45
HDAC4-211ENST00000494800 TRIP6Q15654 476 aaKnown RBP17.86■□□□□ 0.45
HDAC4-211ENST00000494800 TMEM259Q4ZIN3 620 aa17.86■□□□□ 0.45
HDAC4-211ENST00000494800 SEL1L3Q68CR1 1132 aa17.86■□□□□ 0.45
HDAC4-211ENST00000494800 TXNRD3NBQ6F5E7 133 aa17.86■□□□□ 0.45
HDAC4-211ENST00000494800 LRRC49Q8IUZ0 686 aa17.86■□□□□ 0.45
HDAC4-211ENST00000494800 NETO2Q8NC67 525 aa17.86■□□□□ 0.45
HDAC4-211ENST00000494800 RHBDD1Q8TEB9 315 aa17.86■□□□□ 0.45
HDAC4-211ENST00000494800 RFFLQ8WZ73 363 aa17.86■□□□□ 0.45
HDAC4-211ENST00000494800 KLK6Q92876 244 aa17.86■□□□□ 0.45
HDAC4-211ENST00000494800 MRFAP1L1Q96HT8 127 aa17.86■□□□□ 0.45
HDAC4-211ENST00000494800 CDC6Q99741 560 aa17.86■□□□□ 0.45
HDAC4-211ENST00000494800 SLC17A9Q9BYT1 436 aa17.86■□□□□ 0.45
HDAC4-211ENST00000494800 ATP13A3Q9H7F0 1226 aa17.86■□□□□ 0.45
HDAC4-211ENST00000494800 ERVMER34-1Q9H9K5 563 aa17.86■□□□□ 0.45
HDAC4-211ENST00000494800 ANGPTL2Q9UKU9 493 aa17.86■□□□□ 0.45
HDAC4-211ENST00000494800 A0A1B0GTQ1 180 aa17.85■□□□□ 0.45
HDAC4-211ENST00000494800 KCNK3O14649 394 aa17.85■□□□□ 0.45
HDAC4-211ENST00000494800 WNT9AO14904 365 aa17.85■□□□□ 0.45
HDAC4-211ENST00000494800 HSPA9P38646 679 aaKnown RBP17.85■□□□□ 0.45
HDAC4-211ENST00000494800 NSUN2Q08J23 767 aaKnown RBP eCLIP17.85■□□□□ 0.45
HDAC4-211ENST00000494800 ELP6Q0PNE2 266 aa17.85■□□□□ 0.45
HDAC4-211ENST00000494800 LBRQ14739 615 aaKnown RBP17.85■□□□□ 0.45
HDAC4-211ENST00000494800 ODF2Q5BJF6 829 aa17.85■□□□□ 0.45
HDAC4-211ENST00000494800 ERAP2Q6P179 960 aa17.85■□□□□ 0.45
HDAC4-211ENST00000494800 BRAT1Q6PJG6 821 aa17.85■□□□□ 0.45
HDAC4-211ENST00000494800 SRLQ86TD4 932 aa17.85■□□□□ 0.45
HDAC4-211ENST00000494800 TMEM145Q8NBT3 493 aa17.85■□□□□ 0.45
HDAC4-211ENST00000494800 TSEN2Q8NCE0 465 aaKnown RBP17.85■□□□□ 0.45
HDAC4-211ENST00000494800 FAM71BQ8TC56 605 aa17.85■□□□□ 0.45
HDAC4-211ENST00000494800 CXorf40AQ8TE69 158 aa17.85■□□□□ 0.45
HDAC4-211ENST00000494800 TSC1Q92574 1164 aa17.85■□□□□ 0.45
HDAC4-211ENST00000494800 MYOCQ99972 504 aa17.85■□□□□ 0.45
HDAC4-211ENST00000494800 ZNF670Q9BS34 389 aa17.85■□□□□ 0.45
HDAC4-211ENST00000494800 C1QTNF7Q9BXJ2 289 aa17.85■□□□□ 0.45
HDAC4-211ENST00000494800 RBSNQ9H1K0 784 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms