RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 CEP76Q8TAP6 659 aa2.91□□□□□ -1.94
LRIF1-203ENST00000494675 MPLKIPQ8TAP9 179 aa2.91□□□□□ -1.94
LRIF1-203ENST00000494675 METTL6Q8TCB7 284 aa2.91□□□□□ -1.94
LRIF1-203ENST00000494675 TMEM170AQ8WVE7 144 aa2.91□□□□□ -1.94
LRIF1-203ENST00000494675 MSI2Q96DH6 328 aaKnown RBP2.91□□□□□ -1.94
LRIF1-203ENST00000494675 WDR6Q9NNW5 1121 aaKnown RBP2.91□□□□□ -1.94
LRIF1-203ENST00000494675 C20orf141Q9NUB4 165 aa2.91□□□□□ -1.94
LRIF1-203ENST00000494675 TBC1D14Q9P2M4 693 aa2.91□□□□□ -1.94
LRIF1-203ENST00000494675 PCDHA12Q9UN75 941 aa2.91□□□□□ -1.94
LRIF1-203ENST00000494675 TYW5A2RUC4 315 aaKnown RBP2.91□□□□□ -1.94
LRIF1-203ENST00000494675 TTC36A6NLP5 189 aa2.91□□□□□ -1.94
LRIF1-203ENST00000494675 HMGB1P1B2RPK0 211 aaPredicted RBP2.91□□□□□ -1.94
LRIF1-203ENST00000494675 ATG13O75143 517 aa2.91□□□□□ -1.94
LRIF1-203ENST00000494675 MMP3P08254 477 aa2.91□□□□□ -1.94
LRIF1-203ENST00000494675 MYZAPP0CAP1 466 aa2.91□□□□□ -1.94
LRIF1-203ENST00000494675 ENO3P13929 434 aaPredicted RBP2.91□□□□□ -1.94
LRIF1-203ENST00000494675 PRF1P14222 555 aa2.91□□□□□ -1.94
LRIF1-203ENST00000494675 CHMP24386 653 aa2.91□□□□□ -1.94
LRIF1-203ENST00000494675 AVPR1AP37288 418 aa2.91□□□□□ -1.94
LRIF1-203ENST00000494675 RXRGP48443 463 aa2.91□□□□□ -1.94
LRIF1-203ENST00000494675 EIF3BP55884 814 aaKnown RBP2.91□□□□□ -1.94
LRIF1-203ENST00000494675 SLC18A2Q05940 514 aa2.91□□□□□ -1.94
LRIF1-203ENST00000494675 DCTN2Q13561 401 aaKnown RBP2.91□□□□□ -1.94
LRIF1-203ENST00000494675 PKP1Q13835 747 aa2.91□□□□□ -1.94
LRIF1-203ENST00000494675 TBCEQ15813 527 aaPredicted RBP2.91□□□□□ -1.94
LRIF1-203ENST00000494675 ETFDHQ16134 617 aa2.91□□□□□ -1.94
LRIF1-203ENST00000494675 WDR78Q5VTH9 848 aa2.91□□□□□ -1.94
LRIF1-203ENST00000494675 HEPHL1Q6MZM0 1159 aa2.91□□□□□ -1.94
LRIF1-203ENST00000494675 C4orf50Q6ZRC1 276 aa2.91□□□□□ -1.94
LRIF1-203ENST00000494675 TBC1D1Q86TI0 1168 aaPredicted RBP2.91□□□□□ -1.94
LRIF1-203ENST00000494675 KIAA2013Q8IYS2 634 aa2.91□□□□□ -1.94
LRIF1-203ENST00000494675 CADM3Q8N126 398 aa2.91□□□□□ -1.94
LRIF1-203ENST00000494675 ARFGAP1Q8N6T3 406 aa2.91□□□□□ -1.94
LRIF1-203ENST00000494675 KDM1BQ8NB78 822 aa2.91□□□□□ -1.94
LRIF1-203ENST00000494675 ZMIZ2Q8NF64 920 aa2.91□□□□□ -1.94
LRIF1-203ENST00000494675 ETNPPLQ8TBG4 499 aa2.91□□□□□ -1.94
LRIF1-203ENST00000494675 NR1H4Q96RI1 486 aaPredicted RBP2.91□□□□□ -1.94
LRIF1-203ENST00000494675 NUF2Q9BZD4 464 aa2.91□□□□□ -1.94
LRIF1-203ENST00000494675 LHPPQ9H008 270 aa2.91□□□□□ -1.94
LRIF1-203ENST00000494675 MAP6D1Q9H9H5 199 aa2.91□□□□□ -1.94
LRIF1-203ENST00000494675 KRT84Q9NSB2 600 aa2.91□□□□□ -1.94
LRIF1-203ENST00000494675 SPATS2LQ9NUQ6 558 aaKnown RBP2.91□□□□□ -1.94
LRIF1-203ENST00000494675 HSPB7Q9UBY9 170 aa2.91□□□□□ -1.94
LRIF1-203ENST00000494675 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.91□□□□□ -1.94
LRIF1-203ENST00000494675 ADGRF5Q8IZF2 1346 aa2.91□□□□□ -1.94
LRIF1-203ENST00000494675 MDM4O15151 490 aa2.9□□□□□ -1.95
LRIF1-203ENST00000494675 ATP2C2O75185 946 aa2.9□□□□□ -1.95
LRIF1-203ENST00000494675 SYF2O95926 243 aaKnown RBP2.9□□□□□ -1.95
LRIF1-203ENST00000494675 KLKB1P03952 638 aa2.9□□□□□ -1.95
LRIF1-203ENST00000494675 IGKV2-30P06310 120 aa2.9□□□□□ -1.95
LRIF1-203ENST00000494675 SPARCP09486 303 aa2.9□□□□□ -1.95
LRIF1-203ENST00000494675 IRF1P10914 325 aa2.9□□□□□ -1.95
LRIF1-203ENST00000494675 PCNAP12004 261 aa2.9□□□□□ -1.95
LRIF1-203ENST00000494675 ZNF8P17098 575 aaPredicted RBP2.9□□□□□ -1.95
LRIF1-203ENST00000494675 PTPN2P17706 415 aa2.9□□□□□ -1.95
LRIF1-203ENST00000494675 CAPN3P20807 821 aa2.9□□□□□ -1.95
LRIF1-203ENST00000494675 CPOXP36551 454 aa2.9□□□□□ -1.95
LRIF1-203ENST00000494675 POLD2P49005 469 aa2.9□□□□□ -1.95
LRIF1-203ENST00000494675 CENPAP49450 140 aa2.9□□□□□ -1.95
LRIF1-203ENST00000494675 RARSP54136 660 aaKnown RBP2.9□□□□□ -1.95
LRIF1-203ENST00000494675 CDH12P55289 794 aa2.9□□□□□ -1.95
LRIF1-203ENST00000494675 FOXD4Q12950 439 aaPredicted RBP2.9□□□□□ -1.95
LRIF1-203ENST00000494675 PPP2R5BQ15173 497 aa2.9□□□□□ -1.95
LRIF1-203ENST00000494675 HIST2H2ACQ16777 129 aaPredicted RBP2.9□□□□□ -1.95
LRIF1-203ENST00000494675 HYIQ5T013 277 aa2.9□□□□□ -1.95
LRIF1-203ENST00000494675 ASPHD1Q5U4P2 390 aa2.9□□□□□ -1.95
LRIF1-203ENST00000494675 ATG9BQ674R7 924 aa2.9□□□□□ -1.95
LRIF1-203ENST00000494675 NUGGCQ68CJ6 796 aa2.9□□□□□ -1.95
LRIF1-203ENST00000494675 CES5AQ6NT32 575 aa2.9□□□□□ -1.95
LRIF1-203ENST00000494675 CPLX2Q6PUV4 134 aaKnown RBP2.9□□□□□ -1.95
LRIF1-203ENST00000494675 TMTC3Q6ZXV5 915 aa2.9□□□□□ -1.95
LRIF1-203ENST00000494675 SLC46A3Q7Z3Q1 461 aa2.9□□□□□ -1.95
LRIF1-203ENST00000494675 MMP21Q8N119 569 aa2.9□□□□□ -1.95
LRIF1-203ENST00000494675 TMEM199Q8N511 208 aa2.9□□□□□ -1.95
LRIF1-203ENST00000494675 ADAMTS15Q8TE58 950 aa2.9□□□□□ -1.95
LRIF1-203ENST00000494675 LPAR1Q92633 364 aa2.9□□□□□ -1.95
LRIF1-203ENST00000494675 RNF183Q96D59 192 aa2.9□□□□□ -1.95
LRIF1-203ENST00000494675 ZC3HAV1LQ96H79 300 aaKnown RBP2.9□□□□□ -1.95
LRIF1-203ENST00000494675 NLRP4Q96MN2 994 aa2.9□□□□□ -1.95
LRIF1-203ENST00000494675 BBS4Q96RK4 519 aa2.9□□□□□ -1.95
LRIF1-203ENST00000494675 YME1L1Q96TA2 773 aa2.9□□□□□ -1.95
LRIF1-203ENST00000494675 WDR77Q9BQA1 342 aaPredicted RBP2.9□□□□□ -1.95
LRIF1-203ENST00000494675 H2AFJQ9BTM1 129 aa2.9□□□□□ -1.95
LRIF1-203ENST00000494675 POLDIP3Q9BY77 421 aaKnown RBP2.9□□□□□ -1.95
LRIF1-203ENST00000494675 SPRTNQ9H040 489 aaPredicted RBP2.9□□□□□ -1.95
LRIF1-203ENST00000494675 CDT1Q9H211 546 aa2.9□□□□□ -1.95
LRIF1-203ENST00000494675 RANBP17Q9H2T7 1088 aaKnown RBP2.9□□□□□ -1.95
LRIF1-203ENST00000494675 FOXP1Q9H334 677 aaPredicted RBP2.9□□□□□ -1.95
LRIF1-203ENST00000494675 CTNNAL1Q9UBT7 734 aa2.9□□□□□ -1.95
LRIF1-203ENST00000494675 KDM3AQ9Y4C1 1321 aa2.9□□□□□ -1.95
LRIF1-203ENST00000494675 GAGE12JA6NER3 117 aa2.89□□□□□ -1.95
LRIF1-203ENST00000494675 PGPEP1LA6NFU8 196 aa2.89□□□□□ -1.95
LRIF1-203ENST00000494675 F5H0A9 414 aaPredicted RBP2.89□□□□□ -1.95
LRIF1-203ENST00000494675 EBAG9O00559 213 aa2.89□□□□□ -1.95
LRIF1-203ENST00000494675 PPEF2O14830 753 aa2.89□□□□□ -1.95
LRIF1-203ENST00000494675 IFNA2P01563 188 aa2.89□□□□□ -1.95
LRIF1-203ENST00000494675 CLEC3BP05452 202 aa2.89□□□□□ -1.95
LRIF1-203ENST00000494675 TMEM191BP0C7N4 346 aa2.89□□□□□ -1.95
LRIF1-203ENST00000494675 TFPIP10646 304 aa2.89□□□□□ -1.95
LRIF1-203ENST00000494675 CTPS1P17812 591 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms