RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 LGSNQ5TDP6 509 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 RNF219Q5W0B1 726 aaPredicted RBP6.87□□□□□ -1.31
MSH5-217ENST00000494458 KIAA0930Q6ICG6 404 aaPredicted RBP6.87□□□□□ -1.31
MSH5-217ENST00000494458 NCEH1Q6PIU2 408 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 NLRP9Q7RTR0 991 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 ADGRD2Q7Z7M1 963 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 UNC5BQ8IZJ1 945 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 ZNF557Q8N988 423 aaPredicted RBP6.87□□□□□ -1.31
MSH5-217ENST00000494458 TDRD5Q8NAT2 981 aaKnown RBP6.87□□□□□ -1.31
MSH5-217ENST00000494458 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.87□□□□□ -1.31
MSH5-217ENST00000494458 MDM1Q8TC05 714 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 BRSK1Q8TDC3 778 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 MICAL1Q8TDZ2 1067 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 SH3RF2Q8TEC5 729 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 USP33Q8TEY7 942 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 NSMCE1Q8WV22 266 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 CKAP2Q8WWK9 683 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 ISG20Q96AZ6 181 aaKnown RBP6.87□□□□□ -1.31
MSH5-217ENST00000494458 PABPC5Q96DU9 382 aaKnown RBP6.87□□□□□ -1.31
MSH5-217ENST00000494458 MFSD3Q96ES6 412 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 SERAC1Q96JX3 654 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 ZSWIM3Q96MP5 696 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 ZNF778Q96MU6 729 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 LRRC3BQ96PB8 259 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 GCNAQ96QF7 691 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 CPNE1Q99829 537 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 SLC2A11Q9BYW1 496 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 PRO3102Q9H379 93 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 CENPHQ9H3R5 247 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 TRABDQ9H4I3 376 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 KIF9Q9HAQ2 790 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 TRPC7Q9HCX4 862 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 NT5MQ9NPB1 228 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 OBP2AQ9NY56 170 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 UBP1Q9NZI7 540 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 KIAA1522Q9P206 1035 aaPredicted RBP6.87□□□□□ -1.31
MSH5-217ENST00000494458 BCCIPQ9P287 314 aaKnown RBP eCLIP6.87□□□□□ -1.31
MSH5-217ENST00000494458 LHX3Q9UBR4 397 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 UBA2Q9UBT2 640 aaPredicted RBP6.87□□□□□ -1.31
MSH5-217ENST00000494458 VPS51Q9UID3 782 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 CLEC4EQ9ULY5 219 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 HS3ST2Q9Y278 367 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 PPIL1Q9Y3C6 166 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 SH3BP1Q9Y3L3 701 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 MAD1L1Q9Y6D9 718 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 RPS6KL1Q9Y6S9 549 aa6.87□□□□□ -1.31
MSH5-217ENST00000494458 HEATR9A2RTY3 570 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 FAM47DPA6NHR8 397 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 SMIM23A6NLE4 172 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 FOXO6A8MYZ6 492 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 TRAFD1O14545 582 aaPredicted RBP6.86□□□□□ -1.31
MSH5-217ENST00000494458 PER2O15055 1255 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 TM9SF1O15321 606 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 INSIG1O15503 277 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 SLC7A4O43246 635 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 HTRA2O43464 458 aaPredicted RBP6.86□□□□□ -1.31
MSH5-217ENST00000494458 TSPAN3O60637 253 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 UGT1A9O60656 530 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 PMPCBO75439 489 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 PIAS1O75925 651 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 KRT37O76014 449 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 KRT38O76015 456 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 PRAMEF12O95522 483 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 NDST3O95803 873 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 GSRP00390 522 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 IL1BP01584 269 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 FGF1P05230 155 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 CKMP06732 381 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 INHBAP08476 426 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 SERPINF2P08697 491 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 CISD3P0C7P0 127 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 IRF1P10914 325 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 GJA1P17302 382 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 TPH1P17752 444 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 POU3F3P20264 500 aaPredicted RBP6.86□□□□□ -1.31
MSH5-217ENST00000494458 NMBRP28336 390 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 GABRB3P28472 473 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 HPDP32754 393 aaPredicted RBP6.86□□□□□ -1.31
MSH5-217ENST00000494458 CRHR1P34998 444 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 AVPR1AP37288 418 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 GP5P40197 560 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 SERPINH1P50454 418 aaKnown RBP6.86□□□□□ -1.31
MSH5-217ENST00000494458 ATP1A2P50993 1020 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 MAXP61244 160 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 RPL26P61254 145 aaKnown RBP6.86□□□□□ -1.31
MSH5-217ENST00000494458 ILF2Q12905 390 aaKnown RBP6.86□□□□□ -1.31
MSH5-217ENST00000494458 LMAN2Q12907 356 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 LAMB3Q13751 1172 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 PLEKHG6Q3KR16 790 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 ARHGAP15Q53QZ3 475 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 SIRPB2Q5JXA9 342 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 TSTD2Q5T7W7 516 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 PDPK2PQ6A1A2 396 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 IL31Q6EBC2 164 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 ELMSAN1Q6PJG2 1045 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 PACS1Q6VY07 963 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 KIAA0408Q6ZU52 694 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 GRASPQ7Z6J2 395 aaPredicted RBP6.86□□□□□ -1.31
MSH5-217ENST00000494458 PIGWQ7Z7B1 504 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 GPR149Q86SP6 731 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms