RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 C17orf75Q9HAS0 396 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 HPS4Q9NQG7 708 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 TAGLN3Q9UI15 199 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 ANGPTL2Q9UKU9 493 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 INTUQ9ULD6 942 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 PHTF1Q9UMS5 762 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 UBQLN1Q9UMX0 589 aaKnown RBP5.52□□□□□ -1.53
PTCD3-219ENST00000494323 NOL7Q9UMY1 257 aaKnown RBP5.52□□□□□ -1.53
PTCD3-219ENST00000494323 MAGED2Q9UNF1 606 aaPredicted RBP5.52□□□□□ -1.53
PTCD3-219ENST00000494323 SLC8A2Q9UPR5 921 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 ASB3Q9Y575 518 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 ASCC3Q8N3C0 2202 aaKnown RBP5.52□□□□□ -1.53
PTCD3-219ENST00000494323 MYO18AQ92614 2054 aaKnown RBP5.52□□□□□ -1.53
PTCD3-219ENST00000494323 GREB1Q4ZG55 1949 aa5.52□□□□□ -1.53
PTCD3-219ENST00000494323 PI4KAP42356 2102 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 EML5Q05BV3 1969 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 THADAQ6YHU6 1953 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 MYOFQ9NZM1 2061 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 CACNA1EQ15878 2313 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 VWA3AA6NCI4 1184 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 ANTXRLA6NF34 631 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 C4orf47A7E2U8 309 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 TISP43B9A030 160 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 PIRO00625 290 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 CYB561D2O14569 222 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 TRDMT1O14717 391 aaKnown RBP5.51□□□□□ -1.53
PTCD3-219ENST00000494323 HNRNPDLO14979 420 aaKnown RBP5.51□□□□□ -1.53
PTCD3-219ENST00000494323 SLC26A4O43511 780 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 PRICKLE3O43900 615 aaPredicted RBP5.51□□□□□ -1.53
PTCD3-219ENST00000494323 ATG13O75143 517 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 CNOT4O95628 575 aaKnown RBP5.51□□□□□ -1.53
PTCD3-219ENST00000494323 FGF19O95750 216 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 TOP3BO95985 862 aaKnown RBP5.51□□□□□ -1.53
PTCD3-219ENST00000494323 GASTP01350 101 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 ARSAP15289 507 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 TYMPP19971 482 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 HTR1BP28222 390 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 AVPR1AP37288 418 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 LIG4P49917 911 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 SLC12A3P55017 1021 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 PPP2CBP62714 309 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 PPP2CAP67775 309 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 CREB5Q02930 508 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 PLP2Q04941 152 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 PTPAQ15257 358 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 PLK5Q496M5 336 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 TMEM196Q5HYL7 178 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 ZFYVE27Q5T4F4 411 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 SPATA1Q5VX52 437 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 C9orf57Q5W0N0 161 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 WSCD1Q658N2 575 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 NPNTQ6UXI9 565 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 TMEM150AQ86TG1 271 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 THEM5Q8N1Q8 247 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 CAMKK1Q8N5S9 505 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 ANKRD53Q8N9V6 530 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 MSANTD3Q96H12 275 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 C7orf25Q9BPX7 421 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 PYM1Q9BRP8 204 aaKnown RBP5.51□□□□□ -1.53
PTCD3-219ENST00000494323 MSTO1Q9BUK6 570 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 NAA15Q9BXJ9 866 aaKnown RBP5.51□□□□□ -1.53
PTCD3-219ENST00000494323 ZCWPW1Q9H0M4 648 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 IKZF4Q9H2S9 585 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 LINC00597Q9H2U6 94 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 ZHX3Q9H4I2 956 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 BCO1Q9HAY6 547 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 TMLHEQ9NVH6 421 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 KLHL11Q9NVR0 708 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 ING3Q9NXR8 418 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 DPP3Q9NY33 737 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 LARSQ9P2J5 1176 aaKnown RBP5.51□□□□□ -1.53
PTCD3-219ENST00000494323 TBX20Q9UMR3 447 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 L1RE1Q9UN81 338 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 PCDHB1Q9Y5F3 818 aa5.51□□□□□ -1.53
PTCD3-219ENST00000494323 CFAP20Q9Y6A4 193 aaKnown RBP5.51□□□□□ -1.53
PTCD3-219ENST00000494323 FAM208BQ5VWN6 2430 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 FRYQ5TBA9 3013 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 DENND4CQ5VZ89 1909 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 ZFYVE26Q68DK2 2539 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 BAHCC1Q9P281 2608 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 NUP205Q92621 2012 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 IGF2RP11717 2491 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 A0A0B4J269 797 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 ANKRD63C9JTQ0 380 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 OGTO15294 1046 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 FAM189A1O60320 539 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 EPN2O95208 641 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 CAVIN2O95810 425 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 ADRB2P07550 413 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 HAPLN1P10915 354 aaPredicted RBP5.5□□□□□ -1.53
PTCD3-219ENST00000494323 ODC1P11926 461 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 GYPEP15421 78 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 HMGA1P17096 107 aaKnown RBP5.5□□□□□ -1.53
PTCD3-219ENST00000494323 CYP2F1P24903 491 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 CDC25CP30307 473 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 ADSLP30566 484 aaPredicted RBP5.5□□□□□ -1.53
PTCD3-219ENST00000494323 CRHR1P34998 444 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 MPLP40238 635 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 PRPHP41219 470 aa5.5□□□□□ -1.53
PTCD3-219ENST00000494323 IL12RB1P42701 662 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms