RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 PPP1R16AQ96I34 528 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 LRFN3Q9BTN0 628 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 OSBPL1AQ9BXW6 950 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 ATP13A3Q9H7F0 1226 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 USP29Q9HBJ7 922 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 DYRK4Q9NR20 520 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 PPM1HQ9ULR3 514 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 DRG1Q9Y295 367 aaKnown RBP14.74□□□□□ -0.05
BRCA1-223ENST00000494123 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.74□□□□□ -0.05
BRCA1-223ENST00000494123 GJB3O75712 270 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 IFNB1P01574 187 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 UGT2B4P06133 528 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 NFKB1P19838 968 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 CR2P20023 1033 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 SLC8A1P32418 973 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 PXNP49023 591 aaPredicted RBP14.74□□□□□ -0.05
BRCA1-223ENST00000494123 NUBP1P53384 320 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 GDF10P55107 478 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 DSC2Q02487 901 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 LMNB2Q03252 620 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 BCL2L1Q07817 233 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 SFSWAPQ12872 951 aaKnown RBP14.74□□□□□ -0.05
BRCA1-223ENST00000494123 POM121L1PQ3SYA9 428 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 ANKRD20A2Q5SQ80 823 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 CFAP58Q5T655 872 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 ANKRD20A1Q5TYW2 823 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 ANKRD20A3Q5VUR7 823 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 ALG1LQ6GMV1 187 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 NCEH1Q6PIU2 408 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 GDPD4Q6W3E5 623 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 ARHGEF18Q6ZSZ5 1173 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 C12orf50Q8NA57 414 aaPredicted RBP14.74□□□□□ -0.05
BRCA1-223ENST00000494123 SPATA13Q96N96 652 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 TUBGCP5Q96RT8 1024 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 CPEB1Q9BZB8 566 aaKnown RBP14.74□□□□□ -0.05
BRCA1-223ENST00000494123 TPSD1Q9BZJ3 242 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 NOD2Q9HC29 1040 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 GLOD4Q9HC38 313 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 RSPH14Q9UHP6 348 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 CDC23Q9UJX2 597 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 FBXO4Q9UKT5 387 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 SARDHQ9UL12 918 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 SCML1Q9UN30 329 aa14.74□□□□□ -0.05
BRCA1-223ENST00000494123 ANKRD36A6QL64 1941 aa14.73□□□□□ -0.05
BRCA1-223ENST00000494123 CACNA1IQ9P0X4 2223 aa14.73□□□□□ -0.05
BRCA1-223ENST00000494123 C5orf60A6NFR6 353 aa14.73□□□□□ -0.05
BRCA1-223ENST00000494123 MID1O15344 667 aa14.73□□□□□ -0.05
BRCA1-223ENST00000494123 OPHN1O60890 802 aa14.73□□□□□ -0.05
BRCA1-223ENST00000494123 PIGNO95427 931 aa14.73□□□□□ -0.05
BRCA1-223ENST00000494123 SERPINF2P08697 491 aa14.73□□□□□ -0.05
BRCA1-223ENST00000494123 C5AR1P21730 350 aa14.73□□□□□ -0.05
BRCA1-223ENST00000494123 COILP38432 576 aaPredicted RBP14.73□□□□□ -0.05
BRCA1-223ENST00000494123 KCNJ1P48048 391 aa14.73□□□□□ -0.05
BRCA1-223ENST00000494123 NRLP54845 237 aa14.73□□□□□ -0.05
BRCA1-223ENST00000494123 CKAP4Q07065 602 aaKnown RBP14.73□□□□□ -0.05
BRCA1-223ENST00000494123 CYP1B1Q16678 543 aa14.73□□□□□ -0.05
BRCA1-223ENST00000494123 DNTTIP2Q5QJE6 756 aaKnown RBP14.73□□□□□ -0.05
BRCA1-223ENST00000494123 CCDC137Q6PK04 289 aaKnown RBP14.73□□□□□ -0.05
BRCA1-223ENST00000494123 RASSF3Q86WH2 238 aa14.73□□□□□ -0.05
BRCA1-223ENST00000494123 ATL2Q8NHH9 583 aa14.73□□□□□ -0.05
BRCA1-223ENST00000494123 CCDC110Q8TBZ0 833 aa14.73□□□□□ -0.05
BRCA1-223ENST00000494123 KLHL32Q96NJ5 620 aa14.73□□□□□ -0.05
BRCA1-223ENST00000494123 OMDQ99983 421 aa14.73□□□□□ -0.05
BRCA1-223ENST00000494123 SLC25A51Q9H1U9 297 aa14.73□□□□□ -0.05
BRCA1-223ENST00000494123 PABPC3Q9H361 631 aaKnown RBP14.73□□□□□ -0.05
BRCA1-223ENST00000494123 EBF1Q9UH73 591 aa14.73□□□□□ -0.05
BRCA1-223ENST00000494123 NCKAP1Q9Y2A7 1128 aa14.73□□□□□ -0.05
BRCA1-223ENST00000494123 F5H423 210 aaPredicted RBP14.72□□□□□ -0.05
BRCA1-223ENST00000494123 CCDC188H7C350 402 aa14.72□□□□□ -0.05
BRCA1-223ENST00000494123 PDE2AO00408 941 aaPredicted RBP14.72□□□□□ -0.05
BRCA1-223ENST00000494123 AXIN1O15169 862 aa14.72□□□□□ -0.05
BRCA1-223ENST00000494123 ZNF500O60304 480 aaPredicted RBP14.72□□□□□ -0.05
BRCA1-223ENST00000494123 GCATO75600 419 aa14.72□□□□□ -0.05
BRCA1-223ENST00000494123 CA4P22748 312 aa14.72□□□□□ -0.05
BRCA1-223ENST00000494123 HOXA6P31267 233 aa14.72□□□□□ -0.05
BRCA1-223ENST00000494123 CD86P42081 329 aa14.72□□□□□ -0.05
BRCA1-223ENST00000494123 FNTAP49354 379 aa14.72□□□□□ -0.05
BRCA1-223ENST00000494123 NIPAL4Q0D2K0 466 aa14.72□□□□□ -0.05
BRCA1-223ENST00000494123 TUBB2AQ13885 445 aa14.72□□□□□ -0.05
BRCA1-223ENST00000494123 ANGPT1Q15389 498 aa14.72□□□□□ -0.05
BRCA1-223ENST00000494123 P3H1Q32P28 736 aa14.72□□□□□ -0.05
BRCA1-223ENST00000494123 CAMK1DQ8IU85 385 aa14.72□□□□□ -0.05
BRCA1-223ENST00000494123 ARRDC2Q8TBH0 407 aa14.72□□□□□ -0.05
BRCA1-223ENST00000494123 GRK7Q8WTQ7 553 aa14.72□□□□□ -0.05
BRCA1-223ENST00000494123 PDCD6IPQ8WUM4 868 aaKnown RBP14.72□□□□□ -0.05
BRCA1-223ENST00000494123 RTP4Q96DX8 246 aa14.72□□□□□ -0.05
BRCA1-223ENST00000494123 IMP4Q96G21 291 aaKnown RBP14.72□□□□□ -0.05
BRCA1-223ENST00000494123 ZNF641Q96N77 438 aaPredicted RBP14.72□□□□□ -0.05
BRCA1-223ENST00000494123 RBM15Q96T37 977 aaKnown RBP eCLIP14.72□□□□□ -0.05
BRCA1-223ENST00000494123 TUBB2BQ9BVA1 445 aa14.72□□□□□ -0.05
BRCA1-223ENST00000494123 DDX47Q9H0S4 455 aaKnown RBP14.72□□□□□ -0.05
BRCA1-223ENST00000494123 GBA3Q9H227 469 aa14.72□□□□□ -0.05
BRCA1-223ENST00000494123 SUV39H2Q9H5I1 410 aa14.72□□□□□ -0.05
BRCA1-223ENST00000494123 FBXL12Q9NXK8 326 aa14.72□□□□□ -0.05
BRCA1-223ENST00000494123 FEZ2Q9UHY8 353 aaPredicted RBP14.72□□□□□ -0.05
BRCA1-223ENST00000494123 GALR2O43603 387 aaPredicted RBP14.71□□□□□ -0.05
BRCA1-223ENST00000494123 ZNF217O75362 1048 aa14.71□□□□□ -0.05
BRCA1-223ENST00000494123 RNASEH2AO75792 299 aaKnown RBP14.71□□□□□ -0.05
BRCA1-223ENST00000494123 ITGB7P26010 798 aa14.71□□□□□ -0.05
BRCA1-223ENST00000494123 CD68P34810 354 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms