RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, human

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-222	ENST00000493919	SFXN1	Q9H9B4	322 aa		11.76	□□□□□ -0.53
BRCA1-222	ENST00000493919	INTS9	Q9NV88	658 aa	Known RBP	11.76	□□□□□ -0.53
BRCA1-222	ENST00000493919	VPS51	Q9UID3	782 aa		11.76	□□□□□ -0.53
BRCA1-222	ENST00000493919	CD207	Q9UJ71	328 aa		11.76	□□□□□ -0.53
BRCA1-222	ENST00000493919	CDH22	Q9UJ99	828 aa		11.76	□□□□□ -0.53
BRCA1-222	ENST00000493919	RNF112	Q9ULX5	631 aa		11.76	□□□□□ -0.53
BRCA1-222	ENST00000493919	CAB39	Q9Y376	341 aa	Predicted RBP	11.76	□□□□□ -0.53
BRCA1-222	ENST00000493919	MUC3A	Q02505	3323 aa		11.76	□□□□□ -0.53
BRCA1-222	ENST00000493919	TEX51	A0A1B0GUA7	166 aa		11.76	□□□□□ -0.53
BRCA1-222	ENST00000493919	SLC9B1P1	A6NJY1	282 aa		11.76	□□□□□ -0.53
BRCA1-222	ENST00000493919		A8MXQ7	604 aa		11.76	□□□□□ -0.53
BRCA1-222	ENST00000493919	WEE2	P0C1S8	567 aa		11.76	□□□□□ -0.53
BRCA1-222	ENST00000493919	CD58	P19256	250 aa		11.76	□□□□□ -0.53
BRCA1-222	ENST00000493919	WARS	P23381	471 aa	Known RBP	11.76	□□□□□ -0.53
BRCA1-222	ENST00000493919	LMO2	P25791	158 aa		11.76	□□□□□ -0.53
BRCA1-222	ENST00000493919	PCSK1	P29120	753 aa		11.76	□□□□□ -0.53
BRCA1-222	ENST00000493919	FCHO2	Q0JRZ9	810 aa		11.76	□□□□□ -0.53
BRCA1-222	ENST00000493919	RFTN1	Q14699	578 aa	Predicted RBP	11.76	□□□□□ -0.53
BRCA1-222	ENST00000493919	MAN2A1	Q16706	1144 aa		11.76	□□□□□ -0.53
BRCA1-222	ENST00000493919	ZNF461	Q8TAF7	563 aa		11.76	□□□□□ -0.53
BRCA1-222	ENST00000493919	RAB3IP	Q96QF0	476 aa	Predicted RBP	11.76	□□□□□ -0.53
BRCA1-222	ENST00000493919	PIP5K1A	Q99755	562 aa		11.76	□□□□□ -0.53
BRCA1-222	ENST00000493919	TUBGCP2	Q9BSJ2	902 aa		11.76	□□□□□ -0.53
BRCA1-222	ENST00000493919	SDCBP2	Q9H190	292 aa		11.76	□□□□□ -0.53
BRCA1-222	ENST00000493919	C10orf88	Q9H8K7	445 aa		11.76	□□□□□ -0.53
BRCA1-222	ENST00000493919	SMYD2	Q9NRG4	433 aa		11.76	□□□□□ -0.53
BRCA1-222	ENST00000493919	FANCL	Q9NW38	375 aa		11.76	□□□□□ -0.53
BRCA1-222	ENST00000493919	TAB2	Q9NYJ8	693 aa		11.76	□□□□□ -0.53
BRCA1-222	ENST00000493919	GCNT4	Q9P109	453 aa		11.76	□□□□□ -0.53
BRCA1-222	ENST00000493919	MTF2	Q9Y483	593 aa	Predicted RBP	11.76	□□□□□ -0.53
BRCA1-222	ENST00000493919	PCDHGA3	Q9Y5H0	932 aa		11.76	□□□□□ -0.53
BRCA1-222	ENST00000493919	MTMR11	A4FU01	709 aa		11.75	□□□□□ -0.53
BRCA1-222	ENST00000493919	AXIN1	O15169	862 aa		11.75	□□□□□ -0.53
BRCA1-222	ENST00000493919	DNAJB5	O75953	348 aa		11.75	□□□□□ -0.53
BRCA1-222	ENST00000493919	HEXB	P07686	556 aa		11.75	□□□□□ -0.53
BRCA1-222	ENST00000493919	LTA4H	P09960	611 aa	Known RBP	11.75	□□□□□ -0.53
BRCA1-222	ENST00000493919	ATF2	P15336	505 aa		11.75	□□□□□ -0.53
BRCA1-222	ENST00000493919	CDH3	P22223	829 aa		11.75	□□□□□ -0.53
BRCA1-222	ENST00000493919	TCEA1	P23193	301 aa	Known RBP	11.75	□□□□□ -0.53
BRCA1-222	ENST00000493919	CLK3	P49761	638 aa	Known RBP	11.75	□□□□□ -0.53
BRCA1-222	ENST00000493919	KCNQ1	P51787	676 aa		11.75	□□□□□ -0.53
BRCA1-222	ENST00000493919	ORC1	Q13415	861 aa		11.75	□□□□□ -0.53
BRCA1-222	ENST00000493919	FRG1	Q14331	258 aa	Known RBP	11.75	□□□□□ -0.53
BRCA1-222	ENST00000493919	CCDC58	Q4VC31	144 aa		11.75	□□□□□ -0.53
BRCA1-222	ENST00000493919	TCP11X2	Q5H9J9	407 aa		11.75	□□□□□ -0.53
BRCA1-222	ENST00000493919	INTS6L	Q5JSJ4	861 aa	Known RBP	11.75	□□□□□ -0.53
BRCA1-222	ENST00000493919	PPM1L	Q5SGD2	360 aa		11.75	□□□□□ -0.53
BRCA1-222	ENST00000493919	LILRA6	Q6PI73	481 aa		11.75	□□□□□ -0.53
BRCA1-222	ENST00000493919	SYCE2	Q6PIF2	218 aa		11.75	□□□□□ -0.53
BRCA1-222	ENST00000493919	TMEM184A	Q6ZMB5	413 aa		11.75	□□□□□ -0.53
BRCA1-222	ENST00000493919	LPCAT2	Q7L5N7	544 aa		11.75	□□□□□ -0.53
BRCA1-222	ENST00000493919	TBC1D1	Q86TI0	1168 aa	Predicted RBP	11.75	□□□□□ -0.53
BRCA1-222	ENST00000493919	CCDC28A	Q8IWP9	274 aa		11.75	□□□□□ -0.53
BRCA1-222	ENST00000493919	SMRP1	Q8NCR6	262 aa		11.75	□□□□□ -0.53
BRCA1-222	ENST00000493919	ZNF680	Q8NEM1	530 aa		11.75	□□□□□ -0.53
BRCA1-222	ENST00000493919	FEZF2	Q8TBJ5	459 aa		11.75	□□□□□ -0.53
BRCA1-222	ENST00000493919	MSLNL	Q96KJ4	702 aa		11.75	□□□□□ -0.53
BRCA1-222	ENST00000493919	STK33	Q9BYT3	514 aa		11.75	□□□□□ -0.53
BRCA1-222	ENST00000493919	GHITM	Q9H3K2	345 aa		11.75	□□□□□ -0.53
BRCA1-222	ENST00000493919	AFF4	Q9UHB7	1163 aa	Known RBP	11.75	□□□□□ -0.53
BRCA1-222	ENST00000493919	MTCL1	Q9Y4B5	1905 aa	Known RBP	11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919		A0A0G2JPF8	293 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	HNRNPCL3	B7ZW38	293 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919		H7C0C1	242 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	TRIM77	I1YAP6	450 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	GABRD	O14764	452 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	CCL16	O15467	120 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	HSF2BP	O75031	334 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	SLC34A2	O95436	690 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	PAEP	P09466	180 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	TFPT	P0C1Z6	253 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	HNRNPCL4	P0DMR1	293 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	PRKAR1A	P10644	381 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	HOXB8	P17481	243 aa	Predicted RBP	11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	EEF1G	P26641	437 aa	Known RBP	11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	MSH2	P43246	934 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	ATP6V0D1	P61421	351 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	NAA20	P61599	178 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	GPR17	Q13304	367 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	TGFBI	Q15582	683 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	AAK1	Q2M2I8	961 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	PTCRA	Q6ISU1	281 aa	Predicted RBP	11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	CES5A	Q6NT32	575 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	PGM2L1	Q6PCE3	622 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	CCDC149	Q6ZUS6	474 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	TSPYL5	Q86VY4	417 aa	Predicted RBP	11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	GALNT13	Q8IUC8	556 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	LRRC34	Q8IZ02	419 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	DCP1B	Q8IZD4	617 aa	Known RBP	11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	PPM1K	Q8N3J5	372 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	GIPC3	Q8TF64	312 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	DDI1	Q8WTU0	396 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	PMEPA1	Q969W9	287 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	CMTM3	Q96MX0	182 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	NT5C1B	Q96P26	610 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	SEPT5	Q99719	369 aa	Predicted RBP	11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	ACBD6	Q9BR61	282 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	DPEP3	Q9H4B8	488 aa		11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	WDR6	Q9NNW5	1121 aa	Known RBP	11.74	□□□□□ -0.53
BRCA1-222	ENST00000493919	DIABLO	Q9NR28	239 aa		11.74	□□□□□ -0.53

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