RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 NETO2Q8NC67 525 aa22.94■■□□□ 1.26
SNIP1-203ENST00000493916 SP110Q9HB58 689 aa22.94■■□□□ 1.26
SNIP1-203ENST00000493916 TM7SF3Q9NS93 570 aa22.94■■□□□ 1.26
SNIP1-203ENST00000493916 ETNK2Q9NVF9 386 aa22.94■■□□□ 1.26
SNIP1-203ENST00000493916 DKK3Q9UBP4 350 aa22.94■■□□□ 1.26
SNIP1-203ENST00000493916 INTUQ9ULD6 942 aa22.94■■□□□ 1.26
SNIP1-203ENST00000493916 ZFR2Q9UPR6 939 aaKnown RBP22.94■■□□□ 1.26
SNIP1-203ENST00000493916 MTA2O94776 668 aa22.93■■□□□ 1.26
SNIP1-203ENST00000493916 PCDH8O95206 1070 aa22.93■■□□□ 1.26
SNIP1-203ENST00000493916 IL4RP24394 825 aa22.93■■□□□ 1.26
SNIP1-203ENST00000493916 SERPINB6P35237 376 aa22.93■■□□□ 1.26
SNIP1-203ENST00000493916 ZNF75DP51815 510 aa22.93■■□□□ 1.26
SNIP1-203ENST00000493916 CDH6P55285 790 aa22.93■■□□□ 1.26
SNIP1-203ENST00000493916 OVGP1Q12889 678 aa22.93■■□□□ 1.26
SNIP1-203ENST00000493916 HNRNPDQ14103 355 aaKnown RBP22.93■■□□□ 1.26
SNIP1-203ENST00000493916 GRM3Q14832 879 aa22.93■■□□□ 1.26
SNIP1-203ENST00000493916 ARHGAP36Q6ZRI8 547 aa22.93■■□□□ 1.26
SNIP1-203ENST00000493916 CPNE8Q86YQ8 564 aa22.93■■□□□ 1.26
SNIP1-203ENST00000493916 NAXDQ8IW45 347 aa22.93■■□□□ 1.26
SNIP1-203ENST00000493916 RHOT2Q8IXI1 618 aa22.93■■□□□ 1.26
SNIP1-203ENST00000493916 TMEM145Q8NBT3 493 aa22.93■■□□□ 1.26
SNIP1-203ENST00000493916 SLC35G2Q8TBE7 412 aa22.93■■□□□ 1.26
SNIP1-203ENST00000493916 EXOC2Q96KP1 924 aa22.93■■□□□ 1.26
SNIP1-203ENST00000493916 KLHL32Q96NJ5 620 aa22.93■■□□□ 1.26
SNIP1-203ENST00000493916 ZNF599Q96NL3 588 aa22.93■■□□□ 1.26
SNIP1-203ENST00000493916 IPO11Q9UI26 975 aaKnown RBP22.93■■□□□ 1.26
SNIP1-203ENST00000493916 H0Y8X5 98 aa22.92■■□□□ 1.26
SNIP1-203ENST00000493916 TLR4O00206 839 aa22.92■■□□□ 1.26
SNIP1-203ENST00000493916 TSPAN6O43657 245 aa22.92■■□□□ 1.26
SNIP1-203ENST00000493916 PALMO75781 387 aa22.92■■□□□ 1.26
SNIP1-203ENST00000493916 KRT7P08729 469 aa22.92■■□□□ 1.26
SNIP1-203ENST00000493916 ARHGAP25P42331 645 aa22.92■■□□□ 1.26
SNIP1-203ENST00000493916 ABL2P42684 1182 aa22.92■■□□□ 1.26
SNIP1-203ENST00000493916 CSNK1DP48730 415 aa22.92■■□□□ 1.26
SNIP1-203ENST00000493916 CCT8P50990 548 aa22.92■■□□□ 1.26
SNIP1-203ENST00000493916 NXPH1P58417 271 aa22.92■■□□□ 1.26
SNIP1-203ENST00000493916 RPS21P63220 83 aaKnown RBP22.92■■□□□ 1.26
SNIP1-203ENST00000493916 SEL1L3Q68CR1 1132 aa22.92■■□□□ 1.26
SNIP1-203ENST00000493916 DBX2Q6ZNG2 339 aa22.92■■□□□ 1.26
SNIP1-203ENST00000493916 TP53INP2Q8IXH6 220 aa22.92■■□□□ 1.26
SNIP1-203ENST00000493916 HCAR2Q8TDS4 363 aa22.92■■□□□ 1.26
SNIP1-203ENST00000493916 RFFLQ8WZ73 363 aa22.92■■□□□ 1.26
SNIP1-203ENST00000493916 FEM1CQ96JP0 617 aa22.92■■□□□ 1.26
SNIP1-203ENST00000493916 CNOT1A5YKK6 2376 aaKnown RBP22.92■■□□□ 1.26
SNIP1-203ENST00000493916 INSIG1O15503 277 aa22.91■■□□□ 1.26
SNIP1-203ENST00000493916 SH3BP5O60239 455 aa22.91■■□□□ 1.26
SNIP1-203ENST00000493916 CD48P09326 243 aa22.91■■□□□ 1.26
SNIP1-203ENST00000493916 PRLRP16471 622 aa22.91■■□□□ 1.26
SNIP1-203ENST00000493916 HNRNPA2B1P22626 353 aaKnown RBP22.91■■□□□ 1.26
SNIP1-203ENST00000493916 TAS2R40P59535 323 aa22.91■■□□□ 1.26
SNIP1-203ENST00000493916 DPYSL3Q14195 570 aa22.91■■□□□ 1.26
SNIP1-203ENST00000493916 STAT4Q14765 748 aa22.91■■□□□ 1.26
SNIP1-203ENST00000493916 PDK2Q15119 407 aa22.91■■□□□ 1.26
SNIP1-203ENST00000493916 TCEAL1Q15170 157 aa22.91■■□□□ 1.26
SNIP1-203ENST00000493916 TMCO4Q5TGY1 634 aa22.91■■□□□ 1.26
SNIP1-203ENST00000493916 GAS2L3Q86XJ1 694 aa22.91■■□□□ 1.26
SNIP1-203ENST00000493916 TUBGCP5Q96RT8 1024 aa22.91■■□□□ 1.26
SNIP1-203ENST00000493916 ZNF670Q9BS34 389 aa22.91■■□□□ 1.26
SNIP1-203ENST00000493916 CINPQ9BW66 212 aaPredicted RBP22.91■■□□□ 1.26
SNIP1-203ENST00000493916 ERVMER34-1Q9H9K5 563 aa22.91■■□□□ 1.26
SNIP1-203ENST00000493916 GDF3Q9NR23 364 aa22.91■■□□□ 1.26
SNIP1-203ENST00000493916 TMEM131Q92545 1883 aa22.9■■□□□ 1.26
SNIP1-203ENST00000493916 SPTBN2O15020 2390 aa22.9■■□□□ 1.26
SNIP1-203ENST00000493916 A0A1B0GTQ1 180 aa22.9■■□□□ 1.26
SNIP1-203ENST00000493916 TSPAN11A1L157 253 aa22.9■■□□□ 1.26
SNIP1-203ENST00000493916 AREL1O15033 823 aa22.9■■□□□ 1.26
SNIP1-203ENST00000493916 SLC31A1O15431 190 aa22.9■■□□□ 1.26
SNIP1-203ENST00000493916 FLRT2O43155 660 aa22.9■■□□□ 1.26
SNIP1-203ENST00000493916 SPINT1O43278 529 aa22.9■■□□□ 1.26
SNIP1-203ENST00000493916 PCDHGA12O60330 932 aa22.9■■□□□ 1.26
SNIP1-203ENST00000493916 MAGEC1O60732 1142 aa22.9■■□□□ 1.26
SNIP1-203ENST00000493916 AKT2P31751 481 aa22.9■■□□□ 1.26
SNIP1-203ENST00000493916 NSUN2Q08J23 767 aaKnown RBP eCLIP22.9■■□□□ 1.26
SNIP1-203ENST00000493916 MMRN1Q13201 1228 aa22.9■■□□□ 1.26
SNIP1-203ENST00000493916 MESDQ14696 234 aa22.9■■□□□ 1.26
SNIP1-203ENST00000493916 SUZ12Q15022 739 aaKnown RBP22.9■■□□□ 1.26
SNIP1-203ENST00000493916 ATP13A4Q4VNC1 1196 aa22.9■■□□□ 1.26
SNIP1-203ENST00000493916 TSEN2Q8NCE0 465 aaKnown RBP22.9■■□□□ 1.26
SNIP1-203ENST00000493916 ZNF641Q96N77 438 aaPredicted RBP22.9■■□□□ 1.26
SNIP1-203ENST00000493916 ELF4Q99607 663 aaPredicted RBP22.9■■□□□ 1.26
SNIP1-203ENST00000493916 TP53BP1Q12888 1972 aaPredicted RBP22.9■■□□□ 1.26
SNIP1-203ENST00000493916 KCNK3O14649 394 aa22.89■■□□□ 1.25
SNIP1-203ENST00000493916 YKT6O15498 198 aa22.89■■□□□ 1.25
SNIP1-203ENST00000493916 CBFA2T3O75081 653 aa22.89■■□□□ 1.25
SNIP1-203ENST00000493916 PIGNO95427 931 aa22.89■■□□□ 1.25
SNIP1-203ENST00000493916 PEX11BO96011 259 aa22.89■■□□□ 1.25
SNIP1-203ENST00000493916 PMLP29590 882 aa22.89■■□□□ 1.25
SNIP1-203ENST00000493916 GJC1P36383 396 aa22.89■■□□□ 1.25
SNIP1-203ENST00000493916 RGRP47804 291 aa22.89■■□□□ 1.25
SNIP1-203ENST00000493916 SUOXP51687 545 aa22.89■■□□□ 1.25
SNIP1-203ENST00000493916 LBRQ14739 615 aaKnown RBP22.89■■□□□ 1.25
SNIP1-203ENST00000493916 LRRC49Q8IUZ0 686 aa22.89■■□□□ 1.25
SNIP1-203ENST00000493916 MAP7D3Q8IWC1 876 aa22.89■■□□□ 1.25
SNIP1-203ENST00000493916 OXR1Q8N573 874 aa22.89■■□□□ 1.25
SNIP1-203ENST00000493916 ATPAF2Q8N5M1 289 aa22.89■■□□□ 1.25
SNIP1-203ENST00000493916 KCTD6Q8NC69 237 aa22.89■■□□□ 1.25
SNIP1-203ENST00000493916 KLK6Q92876 244 aa22.89■■□□□ 1.25
SNIP1-203ENST00000493916 FAF2Q96CS3 445 aa22.89■■□□□ 1.25
SNIP1-203ENST00000493916 CAMK1GQ96NX5 476 aa22.89■■□□□ 1.25
SNIP1-203ENST00000493916 PSKH2Q96QS6 385 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms