RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 ABCG1P45844 678 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 PEX6Q13608 980 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 C10orf120Q5SQS8 335 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 RASIP1Q5U651 963 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 MBLAC2Q68D91 279 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 PDPK2PQ6A1A2 396 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 PKN3Q6P5Z2 889 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 RIPOR1Q6ZS17 1223 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 NPAS4Q8IUM7 802 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.94□□□□□ -0.189e-6■■■□□ 15.9
VCP-207ENST00000493886 THAP1Q9NVV9 213 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 KCNK4Q9NYG8 393 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 MARCH2Q9P0N8 246 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 DOCK4Q8N1I0 1966 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 TBC1D4O60343 1298 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 PMPCBO75439 489 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 CNTN5O94779 1100 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 GALTP07902 379 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 NDST2P52849 883 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 POU6F1Q14863 301 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 KRT72Q14CN4 511 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 PCLAFQ15004 111 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 ALFQ53S48 1182 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 RNF220Q5VTB9 566 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 CLIP3Q96DZ5 547 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 BTN2A3PQ96KV6 586 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 SEZ6LQ9BYH1 1024 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 WWP1Q9H0M0 922 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 ENTPD7Q9NQZ7 604 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 TMEM248Q9NWD8 314 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 TBKBP1A7MCY6 615 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 PITPNM1O00562 1244 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 TIMM44O43615 452 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 UBTFL6P0CB48 400 aaPredicted RBP13.94□□□□□ -0.18
VCP-207ENST00000493886 FGF3P11487 239 aaPredicted RBP13.94□□□□□ -0.18
VCP-207ENST00000493886 ELAVL2Q12926 359 aaKnown RBP13.94□□□□□ -0.18
VCP-207ENST00000493886 LRRC36Q1X8D7 754 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 C1orf146Q5VVC0 180 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 TMEM173Q86WV6 379 aaPredicted RBP13.94□□□□□ -0.18
VCP-207ENST00000493886 EFCAB3Q8N7B9 438 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 HIPK4Q8NE63 616 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 CCDC124Q96CT7 223 aaKnown RBP13.94□□□□□ -0.18
VCP-207ENST00000493886 HMCESQ96FZ2 354 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 VPS39Q96JC1 886 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 SPATA17Q96L03 361 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 MRGPRX2Q96LB1 330 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 DDX50Q9BQ39 737 aaKnown RBP13.94□□□□□ -0.18
VCP-207ENST00000493886 MCMBPQ9BTE3 642 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 FSD1LQ9BXM9 530 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 CAB39LQ9H9S4 337 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 PIDD1Q9HB75 910 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 ZNF358Q9NW07 568 aa13.94□□□□□ -0.18
VCP-207ENST00000493886 IGLV3-10A0A075B6K4 115 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.93□□□□□ -0.18
VCP-207ENST00000493886 SLC12A8A0AV02 714 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 CAPN14A8MX76 684 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 H7C4K7 107 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 HOXA2O43364 376 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 FKTNO75072 461 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 SORBS2O94875 1100 aaKnown RBP13.93□□□□□ -0.18
VCP-207ENST00000493886 PEX11BO96011 259 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 HMBSP08397 361 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 HAPLN1P10915 354 aaPredicted RBP13.93□□□□□ -0.18
VCP-207ENST00000493886 FUT4P22083 530 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 SLC25A3Q00325 362 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 SFSWAPQ12872 951 aaKnown RBP13.93□□□□□ -0.18
VCP-207ENST00000493886 DUSP4Q13115 394 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 RAP1GAP2Q684P5 730 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 TAS1R1Q7RTX1 841 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 SCUBE1Q8IWY4 988 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 ULK2Q8IYT8 1036 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 CRIPAKQ8N1N5 446 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 AGR3Q8TD06 166 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 PANX3Q96QZ0 392 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 TUBB6Q9BUF5 446 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 MRPL9Q9BYD2 267 aaKnown RBP13.93□□□□□ -0.18
VCP-207ENST00000493886 CYP4F11Q9HBI6 524 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 PAPOLBQ9NRJ5 636 aaKnown RBP13.93□□□□□ -0.18
VCP-207ENST00000493886 NSMCE4AQ9NXX6 385 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 SLC7A8Q9UHI5 535 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 DNAJC16Q9Y2G8 782 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 A0A096LPK6 155 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.93□□□□□ -0.18
VCP-207ENST00000493886 SPECC1L-ADORA2AF8WAN1 911 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 MPOP05164 745 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 SMARCB1Q12824 385 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 HNRNPDQ14103 355 aaKnown RBP13.93□□□□□ -0.18
VCP-207ENST00000493886 VWA5B1Q5TIE3 1220 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 FBXL22Q6P050 247 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 POTEHQ6S545 545 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 C10orf107Q8IVU9 208 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 CCDC117Q8IWD4 279 aaPredicted RBP13.93□□□□□ -0.18
VCP-207ENST00000493886 PLD6Q8N2A8 252 aaKnown RBP13.93□□□□□ -0.18
VCP-207ENST00000493886 PPHLN1Q8NEY8 458 aaKnown RBP13.93□□□□□ -0.18
VCP-207ENST00000493886 SH3TC2Q8TF17 1288 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 ZNF296Q8WUU4 475 aaPredicted RBP13.93□□□□□ -0.18
VCP-207ENST00000493886 IGSF8Q969P0 613 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 TMEM175Q9BSA9 504 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 ACSS2Q9NR19 701 aa13.93□□□□□ -0.18
VCP-207ENST00000493886 COPG2Q9UBF2 871 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms