RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 TUBE1Q9UJT0 475 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 GGA2Q9UJY4 613 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 SAMHD1Q9Y3Z3 626 aaKnown RBP7.93□□□□□ -1.14
BRCA1-221ENST00000493795 TELO2Q9Y4R8 837 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 PCDHB12Q9Y5F1 795 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 TRDMT1O14717 391 aaKnown RBP7.93□□□□□ -1.14
BRCA1-221ENST00000493795 UGT2B11O75310 529 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 LRIG2O94898 1065 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 VAPBO95292 243 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 PIGNO95427 931 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 CBX6O95503 412 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 MLYCDO95822 493 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 AKT2P31751 481 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 RPA3P35244 121 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-221ENST00000493795 NUMBP49757 651 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 THOP1P52888 689 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 FCGRTP55899 365 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 MARSP56192 900 aaKnown RBP7.93□□□□□ -1.14
BRCA1-221ENST00000493795 PSMD5Q16401 504 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 NFE2Q16621 373 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-221ENST00000493795 LSM12Q3MHD2 195 aaKnown RBP7.93□□□□□ -1.14
BRCA1-221ENST00000493795 PDCD4Q53EL6 469 aaKnown RBP7.93□□□□□ -1.14
BRCA1-221ENST00000493795 ANXA8L1Q5VT79 327 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 ISLR2Q6UXK2 745 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 QSOX2Q6ZRP7 698 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 RASGEF1AQ8N9B8 481 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 LRRC20Q8TCA0 184 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 FCRL4Q96PJ5 515 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 PLEKHF1Q96S99 279 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 SMURF2Q9HAU4 748 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 TRPV5Q9NQA5 729 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 MAST1Q9Y2H9 1570 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 DCDC2CA8MYV0 355 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 AGRPO00253 132 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 REM1O75628 298 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 LTA4HP09960 611 aaKnown RBP7.93□□□□□ -1.14
BRCA1-221ENST00000493795 ECHS1P30084 290 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 BUD31P41223 144 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-221ENST00000493795 NAMPTP43490 491 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 TUBA4AP68366 448 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 ACAP2Q15057 778 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 MAPKAPK3Q16644 382 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 TXNDC11Q6PKC3 985 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 DHDDSQ86SQ9 333 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 WDR49Q8IV35 697 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 MCEMP1Q8IX19 187 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 C12orf56Q8IXR9 622 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 SPAG16Q8N0X2 631 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 NKAPQ8N5F7 415 aaKnown RBP7.93□□□□□ -1.14
BRCA1-221ENST00000493795 CHST4Q8NCG5 386 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 SETD6Q8TBK2 473 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 STAG3L4Q8TBR4 150 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 FBXO25Q8TCJ0 367 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 CXorf40AQ8TE69 158 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 ERMAPQ96PL5 475 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-221ENST00000493795 TCF12Q99081 682 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 TBCBQ99426 244 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 SLC4A5Q9BY07 1137 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 ACTL7BQ9Y614 415 aa7.93□□□□□ -1.14
BRCA1-221ENST00000493795 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.92□□□□□ -1.14
BRCA1-221ENST00000493795 ARL5CA6NH57 179 aa7.92□□□□□ -1.14
BRCA1-221ENST00000493795 TSPAN3O60637 253 aa7.92□□□□□ -1.14
BRCA1-221ENST00000493795 NDUFB10O96000 172 aa7.92□□□□□ -1.14
BRCA1-221ENST00000493795 RLN2P04090 185 aa7.92□□□□□ -1.14
BRCA1-221ENST00000493795 THP07101 528 aa7.92□□□□□ -1.14
BRCA1-221ENST00000493795 CETPP11597 493 aa7.92□□□□□ -1.14
BRCA1-221ENST00000493795 FDPSP14324 419 aaKnown RBP7.92□□□□□ -1.14
BRCA1-221ENST00000493795 ALDH5A1P51649 535 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-221ENST00000493795 TRIM40Q6P9F5 258 aa7.92□□□□□ -1.14
BRCA1-221ENST00000493795 SNX20Q7Z614 316 aa7.92□□□□□ -1.14
BRCA1-221ENST00000493795 ZSWIM2Q8NEG5 633 aa7.92□□□□□ -1.14
BRCA1-221ENST00000493795 ZNF563Q8TA94 476 aa7.92□□□□□ -1.14
BRCA1-221ENST00000493795 NKX2-3Q8TAU0 364 aa7.92□□□□□ -1.14
BRCA1-221ENST00000493795 SYT15Q9BQS2 421 aa7.92□□□□□ -1.14
BRCA1-221ENST00000493795 PCDHB5Q9Y5E4 795 aa7.92□□□□□ -1.14
BRCA1-221ENST00000493795 ABCA5Q8WWZ7 1642 aa7.92□□□□□ -1.14
BRCA1-221ENST00000493795 SAGE2PA6NJ88 616 aa7.92□□□□□ -1.14
BRCA1-221ENST00000493795 PLK4O00444 970 aa7.92□□□□□ -1.14
BRCA1-221ENST00000493795 GNRH1P01148 92 aa7.92□□□□□ -1.14
BRCA1-221ENST00000493795 CYP11B2P19099 503 aa7.92□□□□□ -1.14
BRCA1-221ENST00000493795 TUBP50607 506 aa7.92□□□□□ -1.14
BRCA1-221ENST00000493795 SREBF2Q12772 1141 aa7.92□□□□□ -1.14
BRCA1-221ENST00000493795 FRMD7Q6ZUT3 714 aa7.92□□□□□ -1.14
BRCA1-221ENST00000493795 ZNF557Q8N988 423 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-221ENST00000493795 GRPEL2Q8TAA5 225 aa7.92□□□□□ -1.14
BRCA1-221ENST00000493795 SGCDQ92629 289 aa7.92□□□□□ -1.14
BRCA1-221ENST00000493795 SERPINB11Q96P15 392 aa7.92□□□□□ -1.14
BRCA1-221ENST00000493795 XPNPEP3Q9NQH7 507 aa7.92□□□□□ -1.14
BRCA1-221ENST00000493795 SLC33A1O00400 549 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-221ENST00000493795 DCLK1O15075 740 aa7.92□□□□□ -1.14
BRCA1-221ENST00000493795 UGT2B17O75795 530 aa7.92□□□□□ -1.14
BRCA1-221ENST00000493795 CCNB2O95067 398 aa7.92□□□□□ -1.14
BRCA1-221ENST00000493795 FSBPO95073 299 aa7.92□□□□□ -1.14
BRCA1-221ENST00000493795 NOS2P35228 1153 aa7.92□□□□□ -1.14
BRCA1-221ENST00000493795 ELF3P78545 371 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-221ENST00000493795 ROR2Q01974 943 aaKnown RBP7.92□□□□□ -1.14
BRCA1-221ENST00000493795 ZNF234Q14588 700 aa7.92□□□□□ -1.14
BRCA1-221ENST00000493795 SLC34A3Q8N130 599 aa7.92□□□□□ -1.14
BRCA1-221ENST00000493795 CXorf40BQ96DE9 158 aa7.92□□□□□ -1.14
BRCA1-221ENST00000493795 PHF12Q96QT6 1004 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms