RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 SPEM1Q8N4L4 309 aa4.32□□□□□ -1.72
SMC4-223ENST00000493695 RASSF8Q8NHQ8 419 aa4.32□□□□□ -1.72
SMC4-223ENST00000493695 STT3BQ8TCJ2 826 aa4.32□□□□□ -1.72
SMC4-223ENST00000493695 POF1BQ8WVV4 589 aa4.32□□□□□ -1.72
SMC4-223ENST00000493695 ELAC1Q9H777 363 aaKnown RBP4.32□□□□□ -1.72
SMC4-223ENST00000493695 UPB1Q9UBR1 384 aa4.32□□□□□ -1.72
SMC4-223ENST00000493695 KLQ9UEF7 1012 aa4.32□□□□□ -1.72
SMC4-223ENST00000493695 LRCH1Q9Y2L9 728 aa4.32□□□□□ -1.72
SMC4-223ENST00000493695 FAM172BPA6NC97 362 aa4.31□□□□□ -1.72
SMC4-223ENST00000493695 NPIPB11E5RHQ5 1161 aa4.31□□□□□ -1.72
SMC4-223ENST00000493695 FFAR2O15552 330 aa4.31□□□□□ -1.72
SMC4-223ENST00000493695 VNN2O95498 520 aa4.31□□□□□ -1.72
SMC4-223ENST00000493695 PMS2P2O95744 297 aa4.31□□□□□ -1.72
SMC4-223ENST00000493695 IL1AP01583 271 aa4.31□□□□□ -1.72
SMC4-223ENST00000493695 TFRCP02786 760 aaKnown RBP4.31□□□□□ -1.72
SMC4-223ENST00000493695 CETPP11597 493 aa4.31□□□□□ -1.72
SMC4-223ENST00000493695 PDIA3P30101 505 aaKnown RBP4.31□□□□□ -1.72
SMC4-223ENST00000493695 FMO4P31512 558 aa4.31□□□□□ -1.72
SMC4-223ENST00000493695 LIFRP42702 1097 aa4.31□□□□□ -1.72
SMC4-223ENST00000493695 GALNT1Q10472 559 aaPredicted RBP4.31□□□□□ -1.72
SMC4-223ENST00000493695 CHAF1AQ13111 956 aaPredicted RBP4.31□□□□□ -1.72
SMC4-223ENST00000493695 CAPSQ13938 189 aa4.31□□□□□ -1.72
SMC4-223ENST00000493695 TUBB8Q3ZCM7 444 aa4.31□□□□□ -1.72
SMC4-223ENST00000493695 C14orf177Q52M58 125 aa4.31□□□□□ -1.72
SMC4-223ENST00000493695 KLHL24Q6TFL4 600 aa4.31□□□□□ -1.72
SMC4-223ENST00000493695 SFR1Q86XK3 245 aa4.31□□□□□ -1.72
SMC4-223ENST00000493695 UBTD1Q9HAC8 227 aa4.31□□□□□ -1.72
SMC4-223ENST00000493695 PTPRHQ9HD43 1115 aa4.31□□□□□ -1.72
SMC4-223ENST00000493695 SLC45A1Q9Y2W3 748 aa4.31□□□□□ -1.72
SMC4-223ENST00000493695 IGKV3D-20A0A0C4DH25 116 aa4.3□□□□□ -1.72
SMC4-223ENST00000493695 FAM90A18PA6NE21 464 aa4.3□□□□□ -1.72
SMC4-223ENST00000493695 FAM90A16PA6NEW6 464 aa4.3□□□□□ -1.72
SMC4-223ENST00000493695 FAM90A9PA6NNJ1 464 aa4.3□□□□□ -1.72
SMC4-223ENST00000493695 FAM90A5PA8MXJ8 464 aa4.3□□□□□ -1.72
SMC4-223ENST00000493695 P2RY10O00398 339 aa4.3□□□□□ -1.72
SMC4-223ENST00000493695 SLC22A3O75751 556 aa4.3□□□□□ -1.72
SMC4-223ENST00000493695 TNFRSF6BO95407 300 aa4.3□□□□□ -1.72
SMC4-223ENST00000493695 FAM90A15PP0C7V4 464 aa4.3□□□□□ -1.72
SMC4-223ENST00000493695 FAM90A14PP0C7W9 464 aa4.3□□□□□ -1.72
SMC4-223ENST00000493695 RPS6KA3P51812 740 aa4.3□□□□□ -1.72
SMC4-223ENST00000493695 PTK2BQ14289 1009 aa4.3□□□□□ -1.72
SMC4-223ENST00000493695 ACCSLQ4AC99 568 aa4.3□□□□□ -1.72
SMC4-223ENST00000493695 LRRC24Q50LG9 513 aa4.3□□□□□ -1.72
SMC4-223ENST00000493695 AADACL2Q6P093 401 aa4.3□□□□□ -1.72
SMC4-223ENST00000493695 GGT6Q6P531 493 aa4.3□□□□□ -1.72
SMC4-223ENST00000493695 GALNT7Q86SF2 657 aa4.3□□□□□ -1.72
SMC4-223ENST00000493695 BRSK2Q8IWQ3 736 aa4.3□□□□□ -1.72
SMC4-223ENST00000493695 SMC5Q8IY18 1101 aa4.3□□□□□ -1.72
SMC4-223ENST00000493695 OR13A1Q8NGR1 328 aa4.3□□□□□ -1.72
SMC4-223ENST00000493695 STYXQ8WUJ0 223 aa4.3□□□□□ -1.72
SMC4-223ENST00000493695 TRIB2Q92519 343 aa4.3□□□□□ -1.72
SMC4-223ENST00000493695 CPT1BQ92523 772 aa4.3□□□□□ -1.72
SMC4-223ENST00000493695 C3orf49Q96BT1 292 aa4.3□□□□□ -1.72
SMC4-223ENST00000493695 EID2BQ96D98 161 aa4.3□□□□□ -1.72
SMC4-223ENST00000493695 NPAS1Q99742 590 aa4.3□□□□□ -1.72
SMC4-223ENST00000493695 OR6C3Q9NZP0 311 aa4.3□□□□□ -1.72
SMC4-223ENST00000493695 LRFN1Q9P244 771 aa4.3□□□□□ -1.72
SMC4-223ENST00000493695 RIPOR2Q9Y4F9 1068 aa4.3□□□□□ -1.72
SMC4-223ENST00000493695 F5H423 210 aaPredicted RBP4.29□□□□□ -1.72
SMC4-223ENST00000493695 TCEA3O75764 348 aa4.29□□□□□ -1.72
SMC4-223ENST00000493695 KDM4BO94953 1096 aa4.29□□□□□ -1.72
SMC4-223ENST00000493695 FOXO1Q12778 655 aa4.29□□□□□ -1.72
SMC4-223ENST00000493695 STARD3Q14849 445 aa4.29□□□□□ -1.72
SMC4-223ENST00000493695 PUM3Q15397 648 aaKnown RBP4.29□□□□□ -1.72
SMC4-223ENST00000493695 CCDC6Q16204 474 aa4.29□□□□□ -1.72
SMC4-223ENST00000493695 GRAMD1BQ3KR37 738 aa4.29□□□□□ -1.72
SMC4-223ENST00000493695 DCAF6Q58WW2 860 aa4.29□□□□□ -1.72
SMC4-223ENST00000493695 RUNDC3AQ59EK9 446 aa4.29□□□□□ -1.72
SMC4-223ENST00000493695 PLEKHA7Q6IQ23 1121 aa4.29□□□□□ -1.72
SMC4-223ENST00000493695 PGBD2Q6P3X8 592 aa4.29□□□□□ -1.72
SMC4-223ENST00000493695 NFRKBQ6P4R8 1299 aa4.29□□□□□ -1.72
SMC4-223ENST00000493695 FOXL2NBQ6ZUU3 175 aa4.29□□□□□ -1.72
SMC4-223ENST00000493695 MYLK4Q86YV6 388 aaPredicted RBP4.29□□□□□ -1.72
SMC4-223ENST00000493695 MB21D2Q8IYB1 491 aaPredicted RBP4.29□□□□□ -1.72
SMC4-223ENST00000493695 CCDC105Q8IYK2 499 aa4.29□□□□□ -1.72
SMC4-223ENST00000493695 CACNA2D3Q8IZS8 1091 aa4.29□□□□□ -1.72
SMC4-223ENST00000493695 NKAPQ8N5F7 415 aaKnown RBP4.29□□□□□ -1.72
SMC4-223ENST00000493695 WDSUB1Q8N9V3 476 aa4.29□□□□□ -1.72
SMC4-223ENST00000493695 ZNF527Q8NB42 609 aa4.29□□□□□ -1.72
SMC4-223ENST00000493695 VPS37AQ8NEZ2 397 aa4.29□□□□□ -1.72
SMC4-223ENST00000493695 MORC4Q8TE76 937 aa4.29□□□□□ -1.72
SMC4-223ENST00000493695 USP13Q92995 863 aaPredicted RBP4.29□□□□□ -1.72
SMC4-223ENST00000493695 MSTO1Q9BUK6 570 aa4.29□□□□□ -1.72
SMC4-223ENST00000493695 LRRC4Q9HBW1 653 aa4.29□□□□□ -1.72
SMC4-223ENST00000493695 VDAC3Q9Y277 283 aa4.29□□□□□ -1.72
SMC4-223ENST00000493695 A0A1B0GU03 582 aa4.28□□□□□ -1.72
SMC4-223ENST00000493695 PLEKHD1A6NEE1 506 aa4.28□□□□□ -1.72
SMC4-223ENST00000493695 FAM72CH0Y354 149 aa4.28□□□□□ -1.72
SMC4-223ENST00000493695 SYT5O00445 386 aa4.28□□□□□ -1.72
SMC4-223ENST00000493695 HNRNPRO43390 633 aaKnown RBP4.28□□□□□ -1.72
SMC4-223ENST00000493695 SLC25A17O43808 307 aa4.28□□□□□ -1.72
SMC4-223ENST00000493695 IGHV4-30-4P0DP06 118 aa4.28□□□□□ -1.72
SMC4-223ENST00000493695 TRAPPC10P48553 1259 aa4.28□□□□□ -1.72
SMC4-223ENST00000493695 ADORA2A-AS1P86434 159 aa4.28□□□□□ -1.72
SMC4-223ENST00000493695 ICA1Q05084 483 aa4.28□□□□□ -1.72
SMC4-223ENST00000493695 SPARCL1Q14515 664 aa4.28□□□□□ -1.72
SMC4-223ENST00000493695 PFKFB4Q16877 469 aa4.28□□□□□ -1.72
SMC4-223ENST00000493695 GALNTL6Q49A17 601 aa4.28□□□□□ -1.72
SMC4-223ENST00000493695 FAM72AQ5TYM5 149 aa4.28□□□□□ -1.72
SMC4-223ENST00000493695 PLA2G4FQ68DD2 849 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms