RNA–Protein interactions for RNA: ENST00000493627.1

NFIA-213, Transcript of nuclear factor I A, humanhuman

TSL 1 (best)

Gene NFIA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-213ENST00000493627 HPCAL4Q9UM19 191 aa9.26□□□□□ -0.93
NFIA-213ENST00000493627 SIK3Q9Y2K2 1263 aa9.26□□□□□ -0.93
NFIA-213ENST00000493627 PCDHB1Q9Y5F3 818 aa9.26□□□□□ -0.93
NFIA-213ENST00000493627 DOCK4Q8N1I0 1966 aa9.26□□□□□ -0.93
NFIA-213ENST00000493627 LY6G6EA0A0G2JKS1 128 aa9.25□□□□□ -0.93
NFIA-213ENST00000493627 ZSCAN5CA6NGD5 496 aaPredicted RBP9.25□□□□□ -0.93
NFIA-213ENST00000493627 IGLON5A6NGN9 336 aa9.25□□□□□ -0.93
NFIA-213ENST00000493627 OPA1O60313 960 aa9.25□□□□□ -0.93
NFIA-213ENST00000493627 TMCC1O94876 653 aa9.25□□□□□ -0.93
NFIA-213ENST00000493627 CSF2P04141 144 aa9.25□□□□□ -0.93
NFIA-213ENST00000493627 CALB1P05937 261 aa9.25□□□□□ -0.93
NFIA-213ENST00000493627 GP1BAP07359 652 aa9.25□□□□□ -0.93
NFIA-213ENST00000493627 KRT3P12035 628 aa9.25□□□□□ -0.93
NFIA-213ENST00000493627 RFC1P35251 1148 aaPredicted RBP9.25□□□□□ -0.93
NFIA-213ENST00000493627 ACTN2P35609 894 aa9.25□□□□□ -0.93
NFIA-213ENST00000493627 COPB1P53618 953 aaKnown RBP9.25□□□□□ -0.93
NFIA-213ENST00000493627 PFN3P60673 137 aa9.25□□□□□ -0.93
NFIA-213ENST00000493627 SGCGQ13326 291 aa9.25□□□□□ -0.93
NFIA-213ENST00000493627 PDE1CQ14123 709 aaPredicted RBP9.25□□□□□ -0.93
NFIA-213ENST00000493627 CLEC16AQ2KHT3 1053 aa9.25□□□□□ -0.93
NFIA-213ENST00000493627 TBC1D25Q3MII6 688 aa9.25□□□□□ -0.93
NFIA-213ENST00000493627 EFHC2Q5JST6 749 aa9.25□□□□□ -0.93
NFIA-213ENST00000493627 LRRC73Q5JTD7 316 aa9.25□□□□□ -0.93
NFIA-213ENST00000493627 TPRG1LQ5T0D9 272 aa9.25□□□□□ -0.93
NFIA-213ENST00000493627 ATXN7L2Q5T6C5 722 aaPredicted RBP9.25□□□□□ -0.93
NFIA-213ENST00000493627 CDCP2Q5VXM1 449 aa9.25□□□□□ -0.93
NFIA-213ENST00000493627 ZCCHC8Q6NZY4 707 aaKnown RBP9.25□□□□□ -0.93
NFIA-213ENST00000493627 ZNF354CQ86Y25 554 aa9.25□□□□□ -0.93
NFIA-213ENST00000493627 PHF13Q86YI8 300 aaPredicted RBP9.25□□□□□ -0.93
NFIA-213ENST00000493627 RTL3Q8N8U3 475 aaKnown RBP9.25□□□□□ -0.93
NFIA-213ENST00000493627 PCMTD1Q96MG8 357 aaPredicted RBP9.25□□□□□ -0.93
NFIA-213ENST00000493627 GDAP1L1Q96MZ0 367 aa9.25□□□□□ -0.93
NFIA-213ENST00000493627 KLHL32Q96NJ5 620 aa9.25□□□□□ -0.93
NFIA-213ENST00000493627 LENG8Q96PV6 779 aaPredicted RBP9.25□□□□□ -0.93
NFIA-213ENST00000493627 DEPDC7Q96QD5 511 aa9.25□□□□□ -0.93
NFIA-213ENST00000493627 UBL7Q96S82 380 aaPredicted RBP9.25□□□□□ -0.93
NFIA-213ENST00000493627 SELENOOQ9BVL4 669 aa9.25□□□□□ -0.93
NFIA-213ENST00000493627 C1QTNF2Q9BXJ5 285 aa9.25□□□□□ -0.93
NFIA-213ENST00000493627 USP29Q9HBJ7 922 aa9.25□□□□□ -0.93
NFIA-213ENST00000493627 SEPT11Q9NVA2 429 aaKnown RBP9.25□□□□□ -0.93
NFIA-213ENST00000493627 ADAM22Q9P0K1 906 aa9.25□□□□□ -0.93
NFIA-213ENST00000493627 IPO11Q9UI26 975 aaKnown RBP9.25□□□□□ -0.93
NFIA-213ENST00000493627 KLF15Q9UIH9 416 aa9.25□□□□□ -0.93
NFIA-213ENST00000493627 U3KQA8 63 aa9.25□□□□□ -0.93
NFIA-213ENST00000493627 DOCK9Q9BZ29 2069 aa9.25□□□□□ -0.93
NFIA-213ENST00000493627 KNTC1P50748 2209 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 EIF4E1BA6NMX2 242 aaKnown RBP9.24□□□□□ -0.93
NFIA-213ENST00000493627 LGALS16A8MUM7 142 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 AREL1O15033 823 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 CCP110O43303 1012 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 AQP9O43315 295 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 BUB1O43683 1085 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 KDELR3O43731 214 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 CSO75390 466 aaKnown RBP9.24□□□□□ -0.93
NFIA-213ENST00000493627 POP4O95707 220 aaKnown RBP9.24□□□□□ -0.93
NFIA-213ENST00000493627 IGSF6O95976 241 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 JUNDP17535 347 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 EPHB2P29323 1055 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 IGFALSP35858 605 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 DUSP3P51452 185 aaPredicted RBP9.24□□□□□ -0.93
NFIA-213ENST00000493627 GABREP78334 506 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 EIF2B5Q13144 721 aaKnown RBP9.24□□□□□ -0.93
NFIA-213ENST00000493627 MYLK3Q32MK0 819 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 DNAJC24Q6P3W2 148 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 WDR59Q6PJI9 974 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 GDPD4Q6W3E5 623 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 RBM43Q6ZSC3 357 aaKnown RBP9.24□□□□□ -0.93
NFIA-213ENST00000493627 MON1BQ7L1V2 547 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 SLFN11Q7Z7L1 901 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 VPS36Q86VN1 386 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 RBFAQ8N0V3 343 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 PYROXD2Q8N2H3 581 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 NETO2Q8NC67 525 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 ANKRD20A12PQ8NF67 263 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 NEK11Q8NG66 645 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 IFI44Q8TCB0 444 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 MAPK15Q8TD08 544 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 CASKIN2Q8WXE0 1202 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 ASB12Q8WXK4 309 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 FGF11Q92914 225 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 HMCESQ96FZ2 354 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 FCRL3Q96P31 734 aaPredicted RBP9.24□□□□□ -0.93
NFIA-213ENST00000493627 MCEEQ96PE7 176 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 EPAS1Q99814 870 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 TTYH3Q9C0H2 523 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 PRORYQ9H606 182 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 NOL6Q9H6R4 1146 aaKnown RBP9.24□□□□□ -0.93
NFIA-213ENST00000493627 LMBRD1Q9NUN5 540 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 FANCLQ9NW38 375 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 NCKIPSDQ9NZQ3 722 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 APOBEC3BQ9UH17 382 aaKnown RBP9.24□□□□□ -0.93
NFIA-213ENST00000493627 CSNK1G3Q9Y6M4 447 aa9.24□□□□□ -0.93
NFIA-213ENST00000493627 TCRBV5S1A1TA0A578 114 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 ANKRD62A6NC57 917 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 SIGLEC16A6NMB1 481 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 RASA4BC9J798 803 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 RASA4O43374 803 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 CREB3O43889 395 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 USP12O75317 370 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 TM7SF2O76062 418 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms