RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 LRRC63Q05C16 580 aa14.48□□□□□ -0.09
PRPF40A-211ENST00000493468 ZFP36L1Q07352 338 aaKnown RBP14.48□□□□□ -0.09
PRPF40A-211ENST00000493468 CETN1Q12798 172 aa14.48□□□□□ -0.09
PRPF40A-211ENST00000493468 EFHC1Q5JVL4 640 aa14.48□□□□□ -0.09
PRPF40A-211ENST00000493468 ACBD5Q5T8D3 534 aaPredicted RBP14.48□□□□□ -0.09
PRPF40A-211ENST00000493468 FAXCQ5TGI0 409 aa14.48□□□□□ -0.09
PRPF40A-211ENST00000493468 ZNF783Q6ZMS7 281 aa14.48□□□□□ -0.09
PRPF40A-211ENST00000493468 VASH2Q86V25 355 aa14.48□□□□□ -0.09
PRPF40A-211ENST00000493468 PLPP6Q8IY26 295 aa14.48□□□□□ -0.09
PRPF40A-211ENST00000493468 PCDH19Q8TAB3 1148 aa14.48□□□□□ -0.09
PRPF40A-211ENST00000493468 ARHGEF26Q96DR7 871 aa14.48□□□□□ -0.09
PRPF40A-211ENST00000493468 CPEB1Q9BZB8 566 aaKnown RBP14.48□□□□□ -0.09
PRPF40A-211ENST00000493468 LRRN3Q9H3W5 708 aa14.48□□□□□ -0.09
PRPF40A-211ENST00000493468 COX16Q9P0S2 106 aa14.48□□□□□ -0.09
PRPF40A-211ENST00000493468 UNC79Q9P2D8 2635 aa14.48□□□□□ -0.09
PRPF40A-211ENST00000493468 DRGXA6NNA5 263 aa14.47□□□□□ -0.09
PRPF40A-211ENST00000493468 ZMPSTE24O75844 475 aa14.47□□□□□ -0.09
PRPF40A-211ENST00000493468 CASRP41180 1078 aa14.47□□□□□ -0.09
PRPF40A-211ENST00000493468 PRCPP42785 496 aa14.47□□□□□ -0.09
PRPF40A-211ENST00000493468 CARD16Q5EG05 197 aa14.47□□□□□ -0.09
PRPF40A-211ENST00000493468 BRMS1LQ5PSV4 323 aa14.47□□□□□ -0.09
PRPF40A-211ENST00000493468 ANKRD40Q6AI12 368 aa14.47□□□□□ -0.09
PRPF40A-211ENST00000493468 RRAGAQ7L523 313 aa14.47□□□□□ -0.09
PRPF40A-211ENST00000493468 ARHGEF19Q8IW93 802 aa14.47□□□□□ -0.09
PRPF40A-211ENST00000493468 ZNF606Q8WXB4 792 aa14.47□□□□□ -0.09
PRPF40A-211ENST00000493468 KREMEN1Q96MU8 473 aa14.47□□□□□ -0.09
PRPF40A-211ENST00000493468 C1QTNF7Q9BXJ2 289 aa14.47□□□□□ -0.09
PRPF40A-211ENST00000493468 ARHGEF38Q9NXL2 777 aa14.47□□□□□ -0.09
PRPF40A-211ENST00000493468 FOXJ2Q9P0K8 574 aa14.47□□□□□ -0.09
PRPF40A-211ENST00000493468 GULP1Q9UBP9 304 aa14.47□□□□□ -0.09
PRPF40A-211ENST00000493468 ANAPC2Q9UJX6 822 aa14.47□□□□□ -0.09
PRPF40A-211ENST00000493468 DOLKQ9UPQ8 538 aa14.47□□□□□ -0.09
PRPF40A-211ENST00000493468 MAN2B2Q9Y2E5 1009 aa14.47□□□□□ -0.09
PRPF40A-211ENST00000493468 ZFC3H1O60293 1989 aaKnown RBP14.47□□□□□ -0.09
PRPF40A-211ENST00000493468 IGLV3-10A0A075B6K4 115 aa14.46□□□□□ -0.09
PRPF40A-211ENST00000493468 ILVBLA1L0T0 632 aa14.46□□□□□ -0.09
PRPF40A-211ENST00000493468 C16orf96A6NNT2 1141 aa14.46□□□□□ -0.09
PRPF40A-211ENST00000493468 NEMP1O14524 444 aa14.46□□□□□ -0.09
PRPF40A-211ENST00000493468 DAB1O75553 588 aa14.46□□□□□ -0.09
PRPF40A-211ENST00000493468 CELA2BP08218 269 aaPredicted RBP14.46□□□□□ -0.09
PRPF40A-211ENST00000493468 ITIH1P19827 911 aa14.46□□□□□ -0.09
PRPF40A-211ENST00000493468 EIF4A3P38919 411 aaKnown RBP14.46□□□□□ -0.09
PRPF40A-211ENST00000493468 PEX5P50542 639 aa14.46□□□□□ -0.09
PRPF40A-211ENST00000493468 HK3P52790 923 aa14.46□□□□□ -0.09
PRPF40A-211ENST00000493468 PMS1P54277 932 aaKnown RBP14.46□□□□□ -0.09
PRPF40A-211ENST00000493468 CYP4F2P78329 520 aa14.46□□□□□ -0.09
PRPF40A-211ENST00000493468 NME3Q13232 169 aa14.46□□□□□ -0.09
PRPF40A-211ENST00000493468 BORAQ6PGQ7 559 aa14.46□□□□□ -0.09
PRPF40A-211ENST00000493468 ZFAND4Q86XD8 727 aa14.46□□□□□ -0.09
PRPF40A-211ENST00000493468 CCNJLQ8IV13 435 aa14.46□□□□□ -0.09
PRPF40A-211ENST00000493468 ISG20Q96AZ6 181 aaKnown RBP14.46□□□□□ -0.09
PRPF40A-211ENST00000493468 PSMG3-AS1Q96PY0 264 aa14.46□□□□□ -0.09
PRPF40A-211ENST00000493468 CMKLR1Q99788 373 aa14.46□□□□□ -0.09
PRPF40A-211ENST00000493468 SLC12A9Q9BXP2 914 aa14.46□□□□□ -0.09
PRPF40A-211ENST00000493468 EDEM3Q9BZQ6 932 aa14.46□□□□□ -0.09
PRPF40A-211ENST00000493468 SIK2Q9H0K1 926 aa14.46□□□□□ -0.09
PRPF40A-211ENST00000493468 TMEM51Q9NW97 253 aa14.46□□□□□ -0.09
PRPF40A-211ENST00000493468 RMND1Q9NWS8 449 aa14.46□□□□□ -0.09
PRPF40A-211ENST00000493468 RRN3Q9NYV6 651 aa14.46□□□□□ -0.09
PRPF40A-211ENST00000493468 GGT7Q9UJ14 662 aa14.46□□□□□ -0.09
PRPF40A-211ENST00000493468 APPL1Q9UKG1 709 aa14.46□□□□□ -0.09
PRPF40A-211ENST00000493468 C9orf172C9J069 976 aa14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 AREL1O15033 823 aa14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 ENDOD1O94919 500 aa14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 LETM1O95202 739 aaPredicted RBP14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 ADCY5O95622 1261 aa14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 KRT5P13647 590 aa14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 PNLIPP16233 465 aa14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 OR1E1P30953 314 aa14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 ETV5P41161 510 aa14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 CXCR3P49682 368 aa14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 ARF5P84085 180 aa14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 KCNAB2Q13303 367 aa14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 ZNF805Q5CZA5 627 aa14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 ZNF658Q5TYW1 1059 aaPredicted RBP14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 OTUD1Q5VV17 481 aaPredicted RBP14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 OLFML1Q6UWY5 402 aa14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 LRRC31Q6UY01 552 aa14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 SLC26A9Q7LBE3 791 aa14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 VPS36Q86VN1 386 aa14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 GKN2Q86XP6 184 aa14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 SLITRK4Q8IW52 837 aa14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 FAM26EQ8N5C1 309 aa14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 TP53I13Q8NBR0 393 aaPredicted RBP14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 GPR156Q8NFN8 814 aa14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 OR7D4Q8NG98 312 aa14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 USP7Q93009 1102 aa14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 CCDC34Q96HJ3 373 aa14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 SPATA32Q96LK8 384 aa14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 C1orf74Q96LT6 269 aa14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 CEP63Q96MT8 703 aa14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 CPXM1Q96SM3 734 aa14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 EPAS1Q99814 870 aa14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 TKTL2Q9H0I9 626 aa14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 ZDHHC6Q9H6R6 413 aa14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 PIGVQ9NUD9 493 aa14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 SIRPGQ9P1W8 387 aa14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 ZNF212Q9UDV6 495 aa14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 GPR34Q9UPC5 381 aa14.45□□□□□ -0.1
PRPF40A-211ENST00000493468 ITM2BQ9Y287 266 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms