RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 NELFBQ8WX92 580 aa17.96■□□□□ 0.47
NUP50-218ENST00000493456 NT5C3BQ969T7 300 aa17.96■□□□□ 0.47
NUP50-218ENST00000493456 ISG20Q96AZ6 181 aaKnown RBP17.96■□□□□ 0.47
NUP50-218ENST00000493456 TIGD1Q96MW7 591 aa17.96■□□□□ 0.47
NUP50-218ENST00000493456 ARHGAP9Q9BRR9 750 aa17.96■□□□□ 0.47
NUP50-218ENST00000493456 SPON2Q9BUD6 331 aa17.96■□□□□ 0.47
NUP50-218ENST00000493456 C1QTNF7Q9BXJ2 289 aa17.96■□□□□ 0.47
NUP50-218ENST00000493456 STRADBQ9C0K7 418 aa17.96■□□□□ 0.47
NUP50-218ENST00000493456 TCEAL2Q9H3H9 227 aaPredicted RBP17.96■□□□□ 0.47
NUP50-218ENST00000493456 HECAQ9UBI9 543 aaPredicted RBP17.96■□□□□ 0.47
NUP50-218ENST00000493456 ZNF212Q9UDV6 495 aa17.96■□□□□ 0.47
NUP50-218ENST00000493456 SNX10Q9Y5X0 201 aa17.96■□□□□ 0.47
NUP50-218ENST00000493456 KIF26BQ2KJY2 2108 aa17.95■□□□□ 0.46
NUP50-218ENST00000493456 TLN1Q9Y490 2541 aaKnown RBP17.95■□□□□ 0.46
NUP50-218ENST00000493456 GOLGA6L4A6NEF3 574 aa17.95■□□□□ 0.46
NUP50-218ENST00000493456 C16orf96A6NNT2 1141 aa17.95■□□□□ 0.46
NUP50-218ENST00000493456 YY2O15391 372 aa17.95■□□□□ 0.46
NUP50-218ENST00000493456 SFTPCP11686 197 aa17.95■□□□□ 0.46
NUP50-218ENST00000493456 ABL2P42684 1182 aa17.95■□□□□ 0.46
NUP50-218ENST00000493456 DEUP1Q05D60 604 aa17.95■□□□□ 0.46
NUP50-218ENST00000493456 C1orf61Q13536 156 aa17.95■□□□□ 0.46
NUP50-218ENST00000493456 PTPN20Q4JDL3 420 aa17.95■□□□□ 0.46
NUP50-218ENST00000493456 ZNF805Q5CZA5 627 aa17.95■□□□□ 0.46
NUP50-218ENST00000493456 ATG14Q6ZNE5 492 aa17.95■□□□□ 0.46
NUP50-218ENST00000493456 RAB11FIP2Q7L804 512 aa17.95■□□□□ 0.46
NUP50-218ENST00000493456 FSTL5Q8N475 847 aaPredicted RBP17.95■□□□□ 0.46
NUP50-218ENST00000493456 SCG3Q8WXD2 468 aaKnown RBP17.95■□□□□ 0.46
NUP50-218ENST00000493456 SHC3Q92529 594 aa17.95■□□□□ 0.46
NUP50-218ENST00000493456 CENPTQ96BT3 561 aa17.95■□□□□ 0.46
NUP50-218ENST00000493456 EPB41L5Q9HCM4 733 aa17.95■□□□□ 0.46
NUP50-218ENST00000493456 WDR70Q9NW82 654 aa17.95■□□□□ 0.46
NUP50-218ENST00000493456 APEX2Q9UBZ4 518 aa17.95■□□□□ 0.46
NUP50-218ENST00000493456 MAN1B1Q9UKM7 699 aa17.95■□□□□ 0.46
NUP50-218ENST00000493456 FCF1Q9Y324 198 aaKnown RBP17.95■□□□□ 0.46
NUP50-218ENST00000493456 D6RAR5 112 aa17.94■□□□□ 0.46
NUP50-218ENST00000493456 LIPCP11150 499 aa17.94■□□□□ 0.46
NUP50-218ENST00000493456 TSHRP16473 764 aa17.94■□□□□ 0.46
NUP50-218ENST00000493456 TFE3P19532 575 aaPredicted RBP17.94■□□□□ 0.46
NUP50-218ENST00000493456 UGT1A5P35504 534 aa17.94■□□□□ 0.46
NUP50-218ENST00000493456 KRT9P35527 623 aa17.94■□□□□ 0.46
NUP50-218ENST00000493456 IGFALSP35858 605 aa17.94■□□□□ 0.46
NUP50-218ENST00000493456 ETFBP38117 255 aa17.94■□□□□ 0.46
NUP50-218ENST00000493456 BLKP51451 505 aa17.94■□□□□ 0.46
NUP50-218ENST00000493456 GEMIN4P57678 1058 aaKnown RBP17.94■□□□□ 0.46
NUP50-218ENST00000493456 GNA12Q03113 381 aa17.94■□□□□ 0.46
NUP50-218ENST00000493456 PTK2Q05397 1052 aa17.94■□□□□ 0.46
NUP50-218ENST00000493456 ELOCQ15369 112 aa17.94■□□□□ 0.46
NUP50-218ENST00000493456 ARHGAP44Q17R89 818 aa17.94■□□□□ 0.46
NUP50-218ENST00000493456 FAXCQ5TGI0 409 aa17.94■□□□□ 0.46
NUP50-218ENST00000493456 ISM2Q6H9L7 571 aa17.94■□□□□ 0.46
NUP50-218ENST00000493456 LVRNQ6Q4G3 990 aa17.94■□□□□ 0.46
NUP50-218ENST00000493456 JAMLQ86YT9 394 aa17.94■□□□□ 0.46
NUP50-218ENST00000493456 ELOA2Q8IYF1 753 aaPredicted RBP17.94■□□□□ 0.46
NUP50-218ENST00000493456 GFM1Q96RP9 751 aaKnown RBP17.94■□□□□ 0.46
NUP50-218ENST00000493456 HAPLN3Q96S86 360 aa17.94■□□□□ 0.46
NUP50-218ENST00000493456 OSBPL1AQ9BXW6 950 aa17.94■□□□□ 0.46
NUP50-218ENST00000493456 TM6SF2Q9BZW4 377 aa17.94■□□□□ 0.46
NUP50-218ENST00000493456 TRIM4Q9C037 500 aa17.94■□□□□ 0.46
NUP50-218ENST00000493456 ZYG11BQ9C0D3 744 aa17.94■□□□□ 0.46
NUP50-218ENST00000493456 CLPBQ9H078 707 aa17.94■□□□□ 0.46
NUP50-218ENST00000493456 GGT7Q9UJ14 662 aa17.94■□□□□ 0.46
NUP50-218ENST00000493456 PNMA8BQ9ULN7 279 aaPredicted RBP17.94■□□□□ 0.46
NUP50-218ENST00000493456 DOLKQ9UPQ8 538 aa17.94■□□□□ 0.46
NUP50-218ENST00000493456 CTNND2Q9UQB3 1225 aa17.94■□□□□ 0.46
NUP50-218ENST00000493456 FLNCQ14315 2725 aa17.94■□□□□ 0.46
NUP50-218ENST00000493456 PPP1R3GB7ZBB8 358 aa17.93■□□□□ 0.46
NUP50-218ENST00000493456 CASC3O15234 703 aaKnown RBP17.93■□□□□ 0.46
NUP50-218ENST00000493456 NOBOXO60393 691 aa17.93■□□□□ 0.46
NUP50-218ENST00000493456 SRGAP2O75044 1071 aa17.93■□□□□ 0.46
NUP50-218ENST00000493456 ALPIP09923 528 aa17.93■□□□□ 0.46
NUP50-218ENST00000493456 CCKBRP32239 447 aa17.93■□□□□ 0.46
NUP50-218ENST00000493456 SCNN1AP37088 669 aa17.93■□□□□ 0.46
NUP50-218ENST00000493456 PPARDQ03181 441 aa17.93■□□□□ 0.46
NUP50-218ENST00000493456 SLC25A52Q3SY17 297 aa17.93■□□□□ 0.46
NUP50-218ENST00000493456 GJB7Q6PEY0 223 aa17.93■□□□□ 0.46
NUP50-218ENST00000493456 B3GNT8Q7Z7M8 397 aa17.93■□□□□ 0.46
NUP50-218ENST00000493456 VPS36Q86VN1 386 aa17.93■□□□□ 0.46
NUP50-218ENST00000493456 SDR16C5Q8N3Y7 309 aa17.93■□□□□ 0.46
NUP50-218ENST00000493456 RYBPQ8N488 228 aaPredicted RBP17.93■□□□□ 0.46
NUP50-218ENST00000493456 OR6C4Q8NGE1 309 aa17.93■□□□□ 0.46
NUP50-218ENST00000493456 TMEM74Q96NL1 305 aa17.93■□□□□ 0.46
NUP50-218ENST00000493456 TBCBQ99426 244 aa17.93■□□□□ 0.46
NUP50-218ENST00000493456 SEPT10Q9P0V9 454 aa17.93■□□□□ 0.46
NUP50-218ENST00000493456 PPARGC1AQ9UBK2 798 aaKnown RBP17.93■□□□□ 0.46
NUP50-218ENST00000493456 ITM2BQ9Y287 266 aa17.93■□□□□ 0.46
NUP50-218ENST00000493456 DOCK4Q8N1I0 1966 aa17.92■□□□□ 0.46
NUP50-218ENST00000493456 AREL1O15033 823 aa17.92■□□□□ 0.46
NUP50-218ENST00000493456 NVLO15381 856 aaKnown RBP17.92■□□□□ 0.46
NUP50-218ENST00000493456 FGFR1OPO95684 399 aaKnown RBP17.92■□□□□ 0.46
NUP50-218ENST00000493456 CD160O95971 181 aa17.92■□□□□ 0.46
NUP50-218ENST00000493456 GSRP00390 522 aa17.92■□□□□ 0.46
NUP50-218ENST00000493456 JMJD7P0C870 316 aa17.92■□□□□ 0.46
NUP50-218ENST00000493456 RNASE9P60153 205 aaKnown RBP17.92■□□□□ 0.46
NUP50-218ENST00000493456 C1QBPQ07021 282 aaKnown RBP17.92■□□□□ 0.46
NUP50-218ENST00000493456 SRSF1Q07955 248 aaKnown RBP eCLIP17.92■□□□□ 0.46
NUP50-218ENST00000493456 PAK1Q13153 545 aa17.92■□□□□ 0.46
NUP50-218ENST00000493456 POLD3Q15054 466 aaPredicted RBP17.92■□□□□ 0.46
NUP50-218ENST00000493456 ARTNQ5T4W7 220 aa17.92■□□□□ 0.46
NUP50-218ENST00000493456 KYQ8NBH2 561 aa17.92■□□□□ 0.46
NUP50-218ENST00000493456 EXTL1Q92935 676 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms