RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 RNF148Q8N7C7 305 aa16.45■□□□□ 0.22
BRAT1-206ENST00000493232 ZMYND8Q9ULU4 1186 aaPredicted RBP16.45■□□□□ 0.22
BRAT1-206ENST00000493232 NAGLUP54802 743 aa16.45■□□□□ 0.22
BRAT1-206ENST00000493232 SMIM11AP58511 58 aa16.45■□□□□ 0.22
BRAT1-206ENST00000493232 CDC42P60953 191 aa16.45■□□□□ 0.22
BRAT1-206ENST00000493232 CAMK1DQ8IU85 385 aa16.45■□□□□ 0.22
BRAT1-206ENST00000493232 ZNF398Q8TD17 642 aa16.45■□□□□ 0.22
BRAT1-206ENST00000493232 MTFMTQ96DP5 389 aaKnown RBP16.45■□□□□ 0.22
BRAT1-206ENST00000493232 PRDM12Q9H4Q4 367 aa16.45■□□□□ 0.22
BRAT1-206ENST00000493232 MTF2Q9Y483 593 aaPredicted RBP16.45■□□□□ 0.22
BRAT1-206ENST00000493232 CLUHO75153 1309 aa16.45■□□□□ 0.22
BRAT1-206ENST00000493232 LRRC14BA6NHZ5 514 aa16.45■□□□□ 0.22
BRAT1-206ENST00000493232 ULK1O75385 1050 aa16.45■□□□□ 0.22
BRAT1-206ENST00000493232 HTR1BP28222 390 aa16.45■□□□□ 0.22
BRAT1-206ENST00000493232 CLK3P49761 638 aaKnown RBP16.45■□□□□ 0.22
BRAT1-206ENST00000493232 MRPS5P82675 430 aaKnown RBP16.45■□□□□ 0.22
BRAT1-206ENST00000493232 FMO1Q01740 532 aa16.45■□□□□ 0.22
BRAT1-206ENST00000493232 TTC7BQ86TV6 843 aa16.45■□□□□ 0.22
BRAT1-206ENST00000493232 CACTIN-AS1Q8N1I8 211 aa16.45■□□□□ 0.22
BRAT1-206ENST00000493232 OR52L1Q8NGH7 329 aa16.45■□□□□ 0.22
BRAT1-206ENST00000493232 STK32AQ8WU08 396 aa16.45■□□□□ 0.22
BRAT1-206ENST00000493232 SOHLH2Q9NX45 425 aa16.45■□□□□ 0.22
BRAT1-206ENST00000493232 ST3GAL5Q9UNP4 418 aa16.45■□□□□ 0.22
BRAT1-206ENST00000493232 HES2Q9Y543 173 aa16.45■□□□□ 0.22
BRAT1-206ENST00000493232 MOXD2PA6NHM9 499 aa16.44■□□□□ 0.22
BRAT1-206ENST00000493232 PGK1P00558 417 aa16.44■□□□□ 0.22
BRAT1-206ENST00000493232 HIST1H2ABP04908 130 aa16.44■□□□□ 0.22
BRAT1-206ENST00000493232 FGF1P05230 155 aa16.44■□□□□ 0.22
BRAT1-206ENST00000493232 TFEBP19484 476 aa16.44■□□□□ 0.22
BRAT1-206ENST00000493232 LPOP22079 712 aaPredicted RBP16.44■□□□□ 0.22
BRAT1-206ENST00000493232 POLD2P49005 469 aa16.44■□□□□ 0.22
BRAT1-206ENST00000493232 DRG2P55039 364 aaKnown RBP16.44■□□□□ 0.22
BRAT1-206ENST00000493232 ZNF549Q6P9A3 640 aa16.44■□□□□ 0.22
BRAT1-206ENST00000493232 HIST3H2AQ7L7L0 130 aa16.44■□□□□ 0.22
BRAT1-206ENST00000493232 HIST1H2ACQ93077 130 aa16.44■□□□□ 0.22
BRAT1-206ENST00000493232 TRIM8Q9BZR9 551 aa16.44■□□□□ 0.22
BRAT1-206ENST00000493232 KLRC4O43908 158 aa16.44■□□□□ 0.22
BRAT1-206ENST00000493232 CBX6O95503 412 aa16.44■□□□□ 0.22
BRAT1-206ENST00000493232 FGF19O95750 216 aa16.44■□□□□ 0.22
BRAT1-206ENST00000493232 OTCP00480 354 aa16.44■□□□□ 0.22
BRAT1-206ENST00000493232 SNRPB2P08579 225 aaKnown RBP16.44■□□□□ 0.22
BRAT1-206ENST00000493232 ALG11Q2TAA5 492 aa16.44■□□□□ 0.22
BRAT1-206ENST00000493232 MIIPQ5JXC2 388 aa16.44■□□□□ 0.22
BRAT1-206ENST00000493232 C8orf59Q8N0T1 100 aaPredicted RBP16.44■□□□□ 0.22
BRAT1-206ENST00000493232 C6orf62Q9GZU0 229 aaPredicted RBP16.44■□□□□ 0.22
BRAT1-206ENST00000493232 FANCEQ9HB96 536 aa16.44■□□□□ 0.22
BRAT1-206ENST00000493232 ARHGEF3Q9NR81 526 aa16.44■□□□□ 0.22
BRAT1-206ENST00000493232 hCG_1818297A0A087WSY0 165 aa16.44■□□□□ 0.22
BRAT1-206ENST00000493232 ITGA2P17301 1181 aa16.44■□□□□ 0.22
BRAT1-206ENST00000493232 TRAF3Q13114 568 aa16.44■□□□□ 0.22
BRAT1-206ENST00000493232 TRIM25Q14258 630 aaKnown RBP16.44■□□□□ 0.22
BRAT1-206ENST00000493232 RINLQ6ZS11 566 aa16.44■□□□□ 0.22
BRAT1-206ENST00000493232 MARK2Q7KZI7 788 aaKnown RBP16.44■□□□□ 0.22
BRAT1-206ENST00000493232 S100A13Q99584 98 aa16.44■□□□□ 0.22
BRAT1-206ENST00000493232 RHBGQ9H310 441 aa16.44■□□□□ 0.22
BRAT1-206ENST00000493232 PCDHGA4Q9Y5G9 962 aa16.44■□□□□ 0.22
BRAT1-206ENST00000493232 DYTNA2CJ06 578 aa16.44■□□□□ 0.22
BRAT1-206ENST00000493232 SH3BGRLO75368 114 aa16.44■□□□□ 0.22
BRAT1-206ENST00000493232 LYPLA2O95372 231 aa16.44■□□□□ 0.22
BRAT1-206ENST00000493232 GSSP48637 474 aa16.44■□□□□ 0.22
BRAT1-206ENST00000493232 TAF13Q15543 124 aa16.44■□□□□ 0.22
BRAT1-206ENST00000493232 PTPRNQ16849 979 aa16.44■□□□□ 0.22
BRAT1-206ENST00000493232 NEK5Q6P3R8 708 aa16.44■□□□□ 0.22
BRAT1-206ENST00000493232 ZNF662Q6ZS27 426 aa16.44■□□□□ 0.22
BRAT1-206ENST00000493232 EBNA1BP2Q99848 306 aaKnown RBP16.44■□□□□ 0.22
BRAT1-206ENST00000493232 SLC12A4Q9UP95 1085 aa16.44■□□□□ 0.22
BRAT1-206ENST00000493232 CASZ1Q86V15 1759 aa16.43■□□□□ 0.22
BRAT1-206ENST00000493232 LOC102724159A0A0B4J2E5 919 aa16.43■□□□□ 0.22
BRAT1-206ENST00000493232 SRRM3A6NNA2 597 aaPredicted RBP16.43■□□□□ 0.22
BRAT1-206ENST00000493232 PWP2Q15269 919 aaKnown RBP16.43■□□□□ 0.22
BRAT1-206ENST00000493232 NEDD8Q15843 81 aa16.43■□□□□ 0.22
BRAT1-206ENST00000493232 SPANXN2Q5MJ10 180 aa16.43■□□□□ 0.22
BRAT1-206ENST00000493232 KIAA1324Q6UXG2 1013 aaKnown RBP16.43■□□□□ 0.22
BRAT1-206ENST00000493232 HEXDCQ8WVB3 486 aa16.43■□□□□ 0.22
BRAT1-206ENST00000493232 NELL1Q92832 810 aa16.43■□□□□ 0.22
BRAT1-206ENST00000493232 CD101Q93033 1021 aa16.43■□□□□ 0.22
BRAT1-206ENST00000493232 GINS4Q9BRT9 223 aa16.43■□□□□ 0.22
BRAT1-206ENST00000493232 DUSP16Q9BY84 665 aa16.43■□□□□ 0.22
BRAT1-206ENST00000493232 KCND1Q9NSA2 647 aa16.43■□□□□ 0.22
BRAT1-206ENST00000493232 RHBDL2Q9NX52 303 aa16.43■□□□□ 0.22
BRAT1-206ENST00000493232 KIF20BQ96Q89 1820 aa16.43■□□□□ 0.22
BRAT1-206ENST00000493232 C1orf232A0A0U1RR37 186 aa16.43■□□□□ 0.22
BRAT1-206ENST00000493232 TNFSF9P41273 254 aa16.43■□□□□ 0.22
BRAT1-206ENST00000493232 RGMBQ6NW40 437 aa16.43■□□□□ 0.22
BRAT1-206ENST00000493232 ZSCAN18Q8TBC5 510 aaPredicted RBP16.43■□□□□ 0.22
BRAT1-206ENST00000493232 AGO1Q9UL18 857 aaKnown RBP16.43■□□□□ 0.22
BRAT1-206ENST00000493232 BIRC5O15392 142 aa16.43■□□□□ 0.22
BRAT1-206ENST00000493232 GCATO75600 419 aa16.43■□□□□ 0.22
BRAT1-206ENST00000493232 CDC25CP30307 473 aa16.43■□□□□ 0.22
BRAT1-206ENST00000493232 GRM3Q14832 879 aa16.43■□□□□ 0.22
BRAT1-206ENST00000493232 TTC23Q5W5X9 447 aa16.43■□□□□ 0.22
BRAT1-206ENST00000493232 GPRIN3Q6ZVF9 776 aa16.43■□□□□ 0.22
BRAT1-206ENST00000493232 EIF3MQ7L2H7 374 aaKnown RBP16.43■□□□□ 0.22
BRAT1-206ENST00000493232 FAM35AQ86V20 835 aa16.43■□□□□ 0.22
BRAT1-206ENST00000493232 BHLHE22Q8NFJ8 381 aaPredicted RBP16.43■□□□□ 0.22
BRAT1-206ENST00000493232 ART4Q93070 314 aa16.43■□□□□ 0.22
BRAT1-206ENST00000493232 VPS45Q9NRW7 570 aa16.43■□□□□ 0.22
BRAT1-206ENST00000493232 GSTK1Q9Y2Q3 226 aa16.43■□□□□ 0.22
BRAT1-206ENST00000493232 MRPL42Q9Y6G3 142 aaKnown RBP16.43■□□□□ 0.22
BRAT1-206ENST00000493232 EFCAB10A6NFE3 127 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms