RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 ITPKAP23677 461 aa14.15□□□□□ -0.14
CCM2-217ENST00000492883 ITGB7P26010 798 aa14.15□□□□□ -0.14
CCM2-217ENST00000492883 MAOBP27338 520 aa14.15□□□□□ -0.14
CCM2-217ENST00000492883 MPLP40238 635 aa14.15□□□□□ -0.14
CCM2-217ENST00000492883 NEK3P51956 506 aa14.15□□□□□ -0.14
CCM2-217ENST00000492883 PPIDQ08752 370 aaKnown RBP14.15□□□□□ -0.14
CCM2-217ENST00000492883 SPEM2Q0P670 501 aa14.15□□□□□ -0.14
CCM2-217ENST00000492883 CCDC6Q16204 474 aa14.15□□□□□ -0.14
CCM2-217ENST00000492883 CFAP58Q5T655 872 aa14.15□□□□□ -0.14
CCM2-217ENST00000492883 AGBL4Q5VU57 503 aa14.15□□□□□ -0.14
CCM2-217ENST00000492883 KIAA0895LQ68EN5 471 aa14.15□□□□□ -0.14
CCM2-217ENST00000492883 TTC7BQ86TV6 843 aa14.15□□□□□ -0.14
CCM2-217ENST00000492883 TUBGCP5Q96RT8 1024 aa14.15□□□□□ -0.14
CCM2-217ENST00000492883 OSBPL8Q9BZF1 889 aa14.15□□□□□ -0.14
CCM2-217ENST00000492883 BRD8Q9H0E9 1235 aa14.15□□□□□ -0.14
CCM2-217ENST00000492883 MIR1-1HGQ9H1L0 117 aa14.15□□□□□ -0.14
CCM2-217ENST00000492883 KCNF1Q9H3M0 494 aa14.15□□□□□ -0.14
CCM2-217ENST00000492883 KDM4CQ9H3R0 1056 aa14.15□□□□□ -0.14
CCM2-217ENST00000492883 SUV39H2Q9H5I1 410 aa14.15□□□□□ -0.14
CCM2-217ENST00000492883 NT5MQ9NPB1 228 aa14.15□□□□□ -0.14
CCM2-217ENST00000492883 SCUBE2Q9NQ36 999 aa14.15□□□□□ -0.14
CCM2-217ENST00000492883 RBM22Q9NW64 420 aaKnown RBP eCLIP14.15□□□□□ -0.14
CCM2-217ENST00000492883 SAE1Q9UBE0 346 aaPredicted RBP14.15□□□□□ -0.14
CCM2-217ENST00000492883 C16orf96A6NNT2 1141 aa14.14□□□□□ -0.15
CCM2-217ENST00000492883 DDX3YO15523 660 aaKnown RBP14.14□□□□□ -0.15
CCM2-217ENST00000492883 ZSCAN12O43309 604 aa14.14□□□□□ -0.15
CCM2-217ENST00000492883 PLRG1O43660 514 aaKnown RBP14.14□□□□□ -0.15
CCM2-217ENST00000492883 TJP3O95049 919 aa14.14□□□□□ -0.15
CCM2-217ENST00000492883 PIGNO95427 931 aa14.14□□□□□ -0.15
CCM2-217ENST00000492883 XPAP23025 273 aaPredicted RBP14.14□□□□□ -0.15
CCM2-217ENST00000492883 DPP6P42658 865 aa14.14□□□□□ -0.15
CCM2-217ENST00000492883 MAPK8P45983 427 aa14.14□□□□□ -0.15
CCM2-217ENST00000492883 MAXP61244 160 aa14.14□□□□□ -0.15
CCM2-217ENST00000492883 AP1S1P61966 158 aa14.14□□□□□ -0.15
CCM2-217ENST00000492883 BCL2L1Q07817 233 aa14.14□□□□□ -0.15
CCM2-217ENST00000492883 ADCY2Q08462 1091 aa14.14□□□□□ -0.15
CCM2-217ENST00000492883 CCDC173Q0VFZ6 552 aa14.14□□□□□ -0.15
CCM2-217ENST00000492883 ZNF211Q13398 564 aaPredicted RBP14.14□□□□□ -0.15
CCM2-217ENST00000492883 RPS6KA1Q15418 735 aa14.14□□□□□ -0.15
CCM2-217ENST00000492883 PIP5KL1Q5T9C9 394 aa14.14□□□□□ -0.15
CCM2-217ENST00000492883 BBS12Q6ZW61 710 aa14.14□□□□□ -0.15
CCM2-217ENST00000492883 B4GALNT4Q76KP1 1039 aa14.14□□□□□ -0.15
CCM2-217ENST00000492883 CAMK1DQ8IU85 385 aa14.14□□□□□ -0.15
CCM2-217ENST00000492883 SYT12Q8IV01 421 aa14.14□□□□□ -0.15
CCM2-217ENST00000492883 PGBD5Q8N414 524 aa14.14□□□□□ -0.15
CCM2-217ENST00000492883 TEX26Q8N6G2 289 aa14.14□□□□□ -0.15
CCM2-217ENST00000492883 TRIM58Q8NG06 486 aa14.14□□□□□ -0.15
CCM2-217ENST00000492883 MAML1Q92585 1016 aa14.14□□□□□ -0.15
CCM2-217ENST00000492883 FATE1Q969F0 183 aa14.14□□□□□ -0.15
CCM2-217ENST00000492883 FAM131CQ96AQ9 280 aa14.14□□□□□ -0.15
CCM2-217ENST00000492883 BIRC7Q96CA5 298 aa14.14□□□□□ -0.15
CCM2-217ENST00000492883 HAUS1Q96CS2 278 aa14.14□□□□□ -0.15
CCM2-217ENST00000492883 HES6Q96HZ4 224 aa14.14□□□□□ -0.15
CCM2-217ENST00000492883 ZNF641Q96N77 438 aaPredicted RBP14.14□□□□□ -0.15
CCM2-217ENST00000492883 OLFM3Q96PB7 478 aa14.14□□□□□ -0.15
CCM2-217ENST00000492883 ATP13A3Q9H7F0 1226 aa14.14□□□□□ -0.15
CCM2-217ENST00000492883 TMEM74BQ9NUR3 256 aa14.14□□□□□ -0.15
CCM2-217ENST00000492883 EFR3BQ9Y2G0 817 aa14.14□□□□□ -0.15
CCM2-217ENST00000492883 TTLL3Q9Y4R7 772 aa14.14□□□□□ -0.15
CCM2-217ENST00000492883 ATXN2Q99700 1313 aaKnown RBP14.14□□□□□ -0.15
CCM2-217ENST00000492883 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.13□□□□□ -0.15
CCM2-217ENST00000492883 TTC24A2A3L6 582 aaPredicted RBP14.13□□□□□ -0.15
CCM2-217ENST00000492883 KCNK1O00180 336 aa14.13□□□□□ -0.15
CCM2-217ENST00000492883 NEMP1O14524 444 aa14.13□□□□□ -0.15
CCM2-217ENST00000492883 GJB3O75712 270 aa14.13□□□□□ -0.15
CCM2-217ENST00000492883 PCDH8O95206 1070 aa14.13□□□□□ -0.15
CCM2-217ENST00000492883 JCHAINP01591 159 aa14.13□□□□□ -0.15
CCM2-217ENST00000492883 ADRB3P13945 408 aa14.13□□□□□ -0.15
CCM2-217ENST00000492883 GNSP15586 552 aa14.13□□□□□ -0.15
CCM2-217ENST00000492883 PECAM1P16284 738 aaPredicted RBP14.13□□□□□ -0.15
CCM2-217ENST00000492883 SERPINA4P29622 427 aa14.13□□□□□ -0.15
CCM2-217ENST00000492883 PTPN7P35236 360 aa14.13□□□□□ -0.15
CCM2-217ENST00000492883 AADACL2Q6P093 401 aa14.13□□□□□ -0.15
CCM2-217ENST00000492883 PARS2Q7L3T8 475 aaKnown RBP14.13□□□□□ -0.15
CCM2-217ENST00000492883 ZC3H18Q86VM9 953 aaKnown RBP14.13□□□□□ -0.15
CCM2-217ENST00000492883 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.13□□□□□ -0.15
CCM2-217ENST00000492883 GPR161Q8N6U8 529 aaKnown RBP14.13□□□□□ -0.15
CCM2-217ENST00000492883 HCAR2Q8TDS4 363 aa14.13□□□□□ -0.15
CCM2-217ENST00000492883 TFB1MQ8WVM0 346 aaKnown RBP14.13□□□□□ -0.15
CCM2-217ENST00000492883 DNASE2BQ8WZ79 361 aa14.13□□□□□ -0.15
CCM2-217ENST00000492883 NUDCD1Q96RS6 583 aa14.13□□□□□ -0.15
CCM2-217ENST00000492883 MGME1Q9BQP7 344 aa14.13□□□□□ -0.15
CCM2-217ENST00000492883 POLR1EQ9GZS1 481 aaKnown RBP14.13□□□□□ -0.15
CCM2-217ENST00000492883 NOD2Q9HC29 1040 aa14.13□□□□□ -0.15
CCM2-217ENST00000492883 VPS45Q9NRW7 570 aa14.13□□□□□ -0.15
CCM2-217ENST00000492883 SEMA4GQ9NTN9 838 aa14.13□□□□□ -0.15
CCM2-217ENST00000492883 TRMT1Q9NXH9 659 aaKnown RBP14.13□□□□□ -0.15
CCM2-217ENST00000492883 SEPT10Q9P0V9 454 aa14.13□□□□□ -0.15
CCM2-217ENST00000492883 DKK3Q9UBP4 350 aa14.13□□□□□ -0.15
CCM2-217ENST00000492883 EIF2B4Q9UI10 523 aaKnown RBP14.13□□□□□ -0.15
CCM2-217ENST00000492883 PILRBQ9UKJ0 227 aa14.13□□□□□ -0.15
CCM2-217ENST00000492883 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.13□□□□□ -0.15
CCM2-217ENST00000492883 GOLGA6L9A6NEM1 432 aa14.12□□□□□ -0.15
CCM2-217ENST00000492883 RNGTTO60942 597 aaKnown RBP14.12□□□□□ -0.15
CCM2-217ENST00000492883 LRP3O75074 770 aa14.12□□□□□ -0.15
CCM2-217ENST00000492883 ZNF806P0C7X5 589 aa14.12□□□□□ -0.15
CCM2-217ENST00000492883 CR2P20023 1033 aa14.12□□□□□ -0.15
CCM2-217ENST00000492883 MAT2AP31153 395 aaKnown RBP14.12□□□□□ -0.15
CCM2-217ENST00000492883 TAS2R38P59533 333 aa14.12□□□□□ -0.15
CCM2-217ENST00000492883 CSRP2Q16527 193 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms