RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 CPEB1Q9BZB8 566 aaKnown RBP12.64□□□□□ -0.39
COL6A1-205ENST00000492851 ABCG4Q9H172 646 aa12.64□□□□□ -0.39
COL6A1-205ENST00000492851 GPR27Q9NS67 375 aa12.64□□□□□ -0.39
COL6A1-205ENST00000492851 DKK3Q9UBP4 350 aa12.64□□□□□ -0.39
COL6A1-205ENST00000492851 RALYQ9UKM9 306 aaKnown RBP12.64□□□□□ -0.39
COL6A1-205ENST00000492851 FZD10Q9ULW2 581 aa12.64□□□□□ -0.39
COL6A1-205ENST00000492851 TMEM131Q92545 1883 aa12.63□□□□□ -0.39
COL6A1-205ENST00000492851 TCRBV5S1A1TA0A578 114 aa12.63□□□□□ -0.39
COL6A1-205ENST00000492851 POM121BA6NF01 834 aa12.63□□□□□ -0.39
COL6A1-205ENST00000492851 IGLON5A6NGN9 336 aa12.63□□□□□ -0.39
COL6A1-205ENST00000492851 RNF103O00237 685 aa12.63□□□□□ -0.39
COL6A1-205ENST00000492851 TPP1O14773 563 aa12.63□□□□□ -0.39
COL6A1-205ENST00000492851 CCP110O43303 1012 aa12.63□□□□□ -0.39
COL6A1-205ENST00000492851 CREB3O43889 395 aa12.63□□□□□ -0.39
COL6A1-205ENST00000492851 TM7SF2O76062 418 aa12.63□□□□□ -0.39
COL6A1-205ENST00000492851 UGT2B4P06133 528 aa12.63□□□□□ -0.39
COL6A1-205ENST00000492851 NME1P15531 152 aaKnown RBP12.63□□□□□ -0.39
COL6A1-205ENST00000492851 XPAP23025 273 aaPredicted RBP12.63□□□□□ -0.39
COL6A1-205ENST00000492851 ACTN2P35609 894 aa12.63□□□□□ -0.39
COL6A1-205ENST00000492851 ZNF135P52742 658 aaPredicted RBP12.63□□□□□ -0.39
COL6A1-205ENST00000492851 NDST2P52849 883 aa12.63□□□□□ -0.39
COL6A1-205ENST00000492851 THOP1P52888 689 aa12.63□□□□□ -0.39
COL6A1-205ENST00000492851 RHOAP61586 193 aa12.63□□□□□ -0.39
COL6A1-205ENST00000492851 INSM1Q01101 510 aaPredicted RBP12.63□□□□□ -0.39
COL6A1-205ENST00000492851 ELP6Q0PNE2 266 aa12.63□□□□□ -0.39
COL6A1-205ENST00000492851 COL28A1Q2UY09 1125 aa12.63□□□□□ -0.39
COL6A1-205ENST00000492851 RAB6CQ53S08 254 aa12.63□□□□□ -0.39
COL6A1-205ENST00000492851 PPP1R15BQ5SWA1 713 aa12.63□□□□□ -0.39
COL6A1-205ENST00000492851 ZCCHC8Q6NZY4 707 aaKnown RBP12.63□□□□□ -0.39
COL6A1-205ENST00000492851 PDZD3Q86UT5 571 aa12.63□□□□□ -0.39
COL6A1-205ENST00000492851 MARCH9Q86YJ5 346 aa12.63□□□□□ -0.39
COL6A1-205ENST00000492851 MCOLN2Q8IZK6 566 aa12.63□□□□□ -0.39
COL6A1-205ENST00000492851 LSMEM2Q8N112 164 aa12.63□□□□□ -0.39
COL6A1-205ENST00000492851 SLC22A18ASQ8N1D0 253 aa12.63□□□□□ -0.39
COL6A1-205ENST00000492851 TPCN2Q8NHX9 752 aa12.63□□□□□ -0.39
COL6A1-205ENST00000492851 CXorf40AQ8TE69 158 aa12.63□□□□□ -0.39
COL6A1-205ENST00000492851 GLMNQ92990 594 aa12.63□□□□□ -0.39
COL6A1-205ENST00000492851 TBATAQ96M53 351 aa12.63□□□□□ -0.39
COL6A1-205ENST00000492851 MCEEQ96PE7 176 aa12.63□□□□□ -0.39
COL6A1-205ENST00000492851 BPIFA3Q9BQP9 254 aa12.63□□□□□ -0.39
COL6A1-205ENST00000492851 RAB6CQ9H0N0 254 aa12.63□□□□□ -0.39
COL6A1-205ENST00000492851 UCKL1Q9NWZ5 548 aa12.63□□□□□ -0.39
COL6A1-205ENST00000492851 SALL4Q9UJQ4 1053 aa12.63□□□□□ -0.39
COL6A1-205ENST00000492851 NEU3Q9UQ49 428 aa12.63□□□□□ -0.39
COL6A1-205ENST00000492851 NYNRINQ9P2P1 1898 aaKnown RBP12.63□□□□□ -0.39
COL6A1-205ENST00000492851 DMXL2Q8TDJ6 3036 aa12.62□□□□□ -0.39
COL6A1-205ENST00000492851 TMEM110-MUSTN1A8MSY1 372 aa12.62□□□□□ -0.39
COL6A1-205ENST00000492851 RASA4BC9J798 803 aa12.62□□□□□ -0.39
COL6A1-205ENST00000492851 AREL1O15033 823 aa12.62□□□□□ -0.39
COL6A1-205ENST00000492851 FFAR2O15552 330 aa12.62□□□□□ -0.39
COL6A1-205ENST00000492851 RASA4O43374 803 aa12.62□□□□□ -0.39
COL6A1-205ENST00000492851 RNF8O76064 485 aa12.62□□□□□ -0.39
COL6A1-205ENST00000492851 TMCC1O94876 653 aa12.62□□□□□ -0.39
COL6A1-205ENST00000492851 GJB6O95452 261 aa12.62□□□□□ -0.39
COL6A1-205ENST00000492851 MT-CO3P00414 261 aa12.62□□□□□ -0.39
COL6A1-205ENST00000492851 GZMAP12544 262 aa12.62□□□□□ -0.39
COL6A1-205ENST00000492851 RPIAP49247 311 aa12.62□□□□□ -0.39
COL6A1-205ENST00000492851 BLKP51451 505 aa12.62□□□□□ -0.39
COL6A1-205ENST00000492851 PFN3P60673 137 aa12.62□□□□□ -0.39
COL6A1-205ENST00000492851 RPL7AP62424 266 aaKnown RBP12.62□□□□□ -0.39
COL6A1-205ENST00000492851 SERINC3Q13530 473 aa12.62□□□□□ -0.39
COL6A1-205ENST00000492851 PDE1CQ14123 709 aaPredicted RBP12.62□□□□□ -0.39
COL6A1-205ENST00000492851 FGL2Q14314 439 aa12.62□□□□□ -0.39
COL6A1-205ENST00000492851 FZD2Q14332 565 aa12.62□□□□□ -0.39
COL6A1-205ENST00000492851 NCAPHQ15003 741 aa12.62□□□□□ -0.39
COL6A1-205ENST00000492851 IRF2BP2Q7Z5L9 587 aa12.62□□□□□ -0.39
COL6A1-205ENST00000492851 DNAAF5Q86Y56 855 aa12.62□□□□□ -0.39
COL6A1-205ENST00000492851 PSTKQ8IV42 348 aaKnown RBP12.62□□□□□ -0.39
COL6A1-205ENST00000492851 OR6K2Q8NGY2 324 aa12.62□□□□□ -0.39
COL6A1-205ENST00000492851 CENPTQ96BT3 561 aa12.62□□□□□ -0.39
COL6A1-205ENST00000492851 APOLD1Q96LR9 279 aa12.62□□□□□ -0.39
COL6A1-205ENST00000492851 ZNF641Q96N77 438 aaPredicted RBP12.62□□□□□ -0.39
COL6A1-205ENST00000492851 DEPDC7Q96QD5 511 aa12.62□□□□□ -0.39
COL6A1-205ENST00000492851 KLF6Q99612 283 aaPredicted RBP12.62□□□□□ -0.39
COL6A1-205ENST00000492851 IL12RB2Q99665 862 aa12.62□□□□□ -0.39
COL6A1-205ENST00000492851 SPASTQ9UBP0 616 aa12.62□□□□□ -0.39
COL6A1-205ENST00000492851 ACTL7AQ9Y615 435 aa12.62□□□□□ -0.39
COL6A1-205ENST00000492851 SPEGQ15772 3267 aa12.62□□□□□ -0.39
COL6A1-205ENST00000492851 PLXNB3Q9ULL4 1909 aa12.62□□□□□ -0.39
COL6A1-205ENST00000492851 PTPRBP23467 1997 aa12.61□□□□□ -0.39
COL6A1-205ENST00000492851 K7ESM1 405 aa12.61□□□□□ -0.39
COL6A1-205ENST00000492851 RAD51BO15315 384 aa12.61□□□□□ -0.39
COL6A1-205ENST00000492851 DAPK3O43293 454 aa12.61□□□□□ -0.39
COL6A1-205ENST00000492851 AQP9O43315 295 aa12.61□□□□□ -0.39
COL6A1-205ENST00000492851 GIMD1P0DJR0 217 aa12.61□□□□□ -0.39
COL6A1-205ENST00000492851 JUNDP17535 347 aa12.61□□□□□ -0.39
COL6A1-205ENST00000492851 GKP32189 559 aa12.61□□□□□ -0.39
COL6A1-205ENST00000492851 ABL2P42684 1182 aa12.61□□□□□ -0.39
COL6A1-205ENST00000492851 ABCG1P45844 678 aa12.61□□□□□ -0.39
COL6A1-205ENST00000492851 PEX5P50542 639 aa12.61□□□□□ -0.39
COL6A1-205ENST00000492851 TPI1P60174 286 aa12.61□□□□□ -0.39
COL6A1-205ENST00000492851 POLR2LP62875 67 aaKnown RBP12.61□□□□□ -0.39
COL6A1-205ENST00000492851 SEMG2Q02383 582 aa12.61□□□□□ -0.39
COL6A1-205ENST00000492851 TYRO3Q06418 890 aa12.61□□□□□ -0.39
COL6A1-205ENST00000492851 MAMLD1Q13495 774 aa12.61□□□□□ -0.39
COL6A1-205ENST00000492851 CFAP58Q5T655 872 aa12.61□□□□□ -0.39
COL6A1-205ENST00000492851 ERMARDQ5T6L9 678 aa12.61□□□□□ -0.39
COL6A1-205ENST00000492851 ERAP2Q6P179 960 aa12.61□□□□□ -0.39
COL6A1-205ENST00000492851 BRAT1Q6PJG6 821 aa12.61□□□□□ -0.39
COL6A1-205ENST00000492851 APTXQ7Z2E3 356 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms