RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 ARHGAP12Q8IWW6 846 aa11.97□□□□□ -0.49
MDC1-207ENST00000492462 PLPP6Q8IY26 295 aa11.97□□□□□ -0.49
MDC1-207ENST00000492462 CHCHD4Q8N4Q1 142 aa11.97□□□□□ -0.49
MDC1-207ENST00000492462 NPWQ8N729 165 aa11.97□□□□□ -0.49
MDC1-207ENST00000492462 MFSD2AQ8NA29 543 aa11.97□□□□□ -0.49
MDC1-207ENST00000492462 TMEM145Q8NBT3 493 aa11.97□□□□□ -0.49
MDC1-207ENST00000492462 KLHL32Q96NJ5 620 aa11.97□□□□□ -0.49
MDC1-207ENST00000492462 ELF4Q99607 663 aaPredicted RBP11.97□□□□□ -0.49
MDC1-207ENST00000492462 PDFQ9HBH1 243 aa11.97□□□□□ -0.49
MDC1-207ENST00000492462 GDF3Q9NR23 364 aa11.97□□□□□ -0.49
MDC1-207ENST00000492462 TOR4AQ9NXH8 423 aa11.97□□□□□ -0.49
MDC1-207ENST00000492462 CWC15Q9P013 229 aaKnown RBP11.97□□□□□ -0.49
MDC1-207ENST00000492462 LHX3Q9UBR4 397 aa11.97□□□□□ -0.49
MDC1-207ENST00000492462 NENFQ9UMX5 172 aa11.97□□□□□ -0.49
MDC1-207ENST00000492462 DMTF1Q9Y222 760 aa11.97□□□□□ -0.49
MDC1-207ENST00000492462 ITM2BQ9Y287 266 aa11.97□□□□□ -0.49
MDC1-207ENST00000492462 BZW2Q9Y6E2 419 aaKnown RBP11.97□□□□□ -0.49
MDC1-207ENST00000492462 SCINQ9Y6U3 715 aa11.97□□□□□ -0.49
MDC1-207ENST00000492462 PTPRBP23467 1997 aa11.97□□□□□ -0.49
MDC1-207ENST00000492462 ANKRD36A6QL64 1941 aa11.97□□□□□ -0.49
MDC1-207ENST00000492462 LRRK1Q38SD2 2015 aa11.96□□□□□ -0.49
MDC1-207ENST00000492462 PLXNB3Q9ULL4 1909 aa11.96□□□□□ -0.49
MDC1-207ENST00000492462 C16orf96A6NNT2 1141 aa11.96□□□□□ -0.49
MDC1-207ENST00000492462 RAD51BO15315 384 aa11.96□□□□□ -0.49
MDC1-207ENST00000492462 PCDHGA12O60330 932 aa11.96□□□□□ -0.49
MDC1-207ENST00000492462 DESP17661 470 aa11.96□□□□□ -0.49
MDC1-207ENST00000492462 EIF4A3P38919 411 aaKnown RBP11.96□□□□□ -0.49
MDC1-207ENST00000492462 RGRP47804 291 aa11.96□□□□□ -0.49
MDC1-207ENST00000492462 PAPOLAP51003 745 aaKnown RBP11.96□□□□□ -0.49
MDC1-207ENST00000492462 RHOAP61586 193 aa11.96□□□□□ -0.49
MDC1-207ENST00000492462 SNRPD1P62314 119 aaKnown RBP11.96□□□□□ -0.49
MDC1-207ENST00000492462 BNIP3Q12983 259 aa11.96□□□□□ -0.49
MDC1-207ENST00000492462 MAPK8IP2Q13387 824 aaPredicted RBP11.96□□□□□ -0.49
MDC1-207ENST00000492462 HNRNPDQ14103 355 aaKnown RBP11.96□□□□□ -0.49
MDC1-207ENST00000492462 STAT4Q14765 748 aa11.96□□□□□ -0.49
MDC1-207ENST00000492462 ZNF805Q5CZA5 627 aa11.96□□□□□ -0.49
MDC1-207ENST00000492462 AFMIDQ63HM1 303 aa11.96□□□□□ -0.49
MDC1-207ENST00000492462 NEK5Q6P3R8 708 aa11.96□□□□□ -0.49
MDC1-207ENST00000492462 FBXL19Q6PCT2 694 aa11.96□□□□□ -0.49
MDC1-207ENST00000492462 TRIM11Q96F44 468 aa11.96□□□□□ -0.49
MDC1-207ENST00000492462 PPP1R16AQ96I34 528 aa11.96□□□□□ -0.49
MDC1-207ENST00000492462 GDAP1L1Q96MZ0 367 aa11.96□□□□□ -0.49
MDC1-207ENST00000492462 NUP85Q9BW27 656 aa11.96□□□□□ -0.49
MDC1-207ENST00000492462 TMEM121BQ9BXQ6 578 aaPredicted RBP11.96□□□□□ -0.49
MDC1-207ENST00000492462 TSPY26PQ9H489 355 aa11.96□□□□□ -0.49
MDC1-207ENST00000492462 ZWILCHQ9H900 591 aa11.96□□□□□ -0.49
MDC1-207ENST00000492462 MRPL47Q9HD33 250 aaKnown RBP11.96□□□□□ -0.49
MDC1-207ENST00000492462 ETNK2Q9NVF9 386 aa11.96□□□□□ -0.49
MDC1-207ENST00000492462 TPX2Q9ULW0 747 aaKnown RBP11.96□□□□□ -0.49
MDC1-207ENST00000492462 ZSCAN5CA6NGD5 496 aaPredicted RBP11.95□□□□□ -0.5
MDC1-207ENST00000492462 GOLGA8CPA6NN73 597 aa11.95□□□□□ -0.5
MDC1-207ENST00000492462 PRAMEF26H0Y7S4 382 aa11.95□□□□□ -0.5
MDC1-207ENST00000492462 DAPK3O43293 454 aa11.95□□□□□ -0.5
MDC1-207ENST00000492462 PRAMEF11O60813 436 aa11.95□□□□□ -0.5
MDC1-207ENST00000492462 PIGNO95427 931 aa11.95□□□□□ -0.5
MDC1-207ENST00000492462 POP4O95707 220 aaKnown RBP11.95□□□□□ -0.5
MDC1-207ENST00000492462 PAK4O96013 591 aaPredicted RBP11.95□□□□□ -0.5
MDC1-207ENST00000492462 CYP1A2P05177 515 aa11.95□□□□□ -0.5
MDC1-207ENST00000492462 RARAP10276 462 aa11.95□□□□□ -0.5
MDC1-207ENST00000492462 AMPD1P23109 780 aa11.95□□□□□ -0.5
MDC1-207ENST00000492462 EPHA8P29322 1005 aaPredicted RBP11.95□□□□□ -0.5
MDC1-207ENST00000492462 HNRNPH3P31942 346 aaKnown RBP11.95□□□□□ -0.5
MDC1-207ENST00000492462 HTR7P34969 479 aa11.95□□□□□ -0.5
MDC1-207ENST00000492462 NUDT1P36639 197 aa11.95□□□□□ -0.5
MDC1-207ENST00000492462 NDST2P52849 883 aa11.95□□□□□ -0.5
MDC1-207ENST00000492462 CCDC15Q0P6D6 951 aa11.95□□□□□ -0.5
MDC1-207ENST00000492462 DPYSQ14117 519 aa11.95□□□□□ -0.5
MDC1-207ENST00000492462 SUZ12Q15022 739 aaKnown RBP11.95□□□□□ -0.5
MDC1-207ENST00000492462 INO80DQ53TQ3 878 aaPredicted RBP11.95□□□□□ -0.5
MDC1-207ENST00000492462 SLC45A4Q5BKX6 768 aa11.95□□□□□ -0.5
MDC1-207ENST00000492462 CCDC122Q5T0U0 273 aa11.95□□□□□ -0.5
MDC1-207ENST00000492462 ALKBH5Q6P6C2 394 aaKnown RBP11.95□□□□□ -0.5
MDC1-207ENST00000492462 GDPD4Q6W3E5 623 aa11.95□□□□□ -0.5
MDC1-207ENST00000492462 GCNT7Q6ZNI0 430 aa11.95□□□□□ -0.5
MDC1-207ENST00000492462 RAB44Q7Z6P3 723 aaPredicted RBP11.95□□□□□ -0.5
MDC1-207ENST00000492462 GLRX5Q86SX6 157 aa11.95□□□□□ -0.5
MDC1-207ENST00000492462 VPS36Q86VN1 386 aa11.95□□□□□ -0.5
MDC1-207ENST00000492462 OR13H1Q8NG92 308 aa11.95□□□□□ -0.5
MDC1-207ENST00000492462 SAP25Q8TEE9 199 aa11.95□□□□□ -0.5
MDC1-207ENST00000492462 HSPH1Q92598 858 aa11.95□□□□□ -0.5
MDC1-207ENST00000492462 SKA1Q96BD8 255 aa11.95□□□□□ -0.5
MDC1-207ENST00000492462 PACSIN1Q9BY11 444 aa11.95□□□□□ -0.5
MDC1-207ENST00000492462 UBA2Q9UBT2 640 aaPredicted RBP11.95□□□□□ -0.5
MDC1-207ENST00000492462 ANAPC7Q9UJX3 599 aa11.95□□□□□ -0.5
MDC1-207ENST00000492462 SHROOM3Q8TF72 1996 aa11.95□□□□□ -0.5
MDC1-207ENST00000492462 LAMA5O15230 3695 aa11.95□□□□□ -0.5
MDC1-207ENST00000492462 TMEM8BA6NDV4 472 aa11.94□□□□□ -0.5
MDC1-207ENST00000492462 IGLON5A6NGN9 336 aa11.94□□□□□ -0.5
MDC1-207ENST00000492462 EIF3CLB5ME19 914 aaKnown RBP11.94□□□□□ -0.5
MDC1-207ENST00000492462 DFFAO00273 331 aa11.94□□□□□ -0.5
MDC1-207ENST00000492462 AREL1O15033 823 aa11.94□□□□□ -0.5
MDC1-207ENST00000492462 AP1G1O43747 822 aa11.94□□□□□ -0.5
MDC1-207ENST00000492462 DFNA5O60443 496 aa11.94□□□□□ -0.5
MDC1-207ENST00000492462 SDC3O75056 442 aa11.94□□□□□ -0.5
MDC1-207ENST00000492462 IGSF6O95976 241 aa11.94□□□□□ -0.5
MDC1-207ENST00000492462 THEGLP0DJG4 465 aa11.94□□□□□ -0.5
MDC1-207ENST00000492462 TIMP2P16035 220 aa11.94□□□□□ -0.5
MDC1-207ENST00000492462 HNRNPA2B1P22626 353 aaKnown RBP11.94□□□□□ -0.5
MDC1-207ENST00000492462 PCK1P35558 622 aa11.94□□□□□ -0.5
MDC1-207ENST00000492462 GRK6P43250 576 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms