RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 FILIP1LQ4L180 1135 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 CCDC183Q5T5S1 534 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 TRNP1Q6NT89 227 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 ZCCHC8Q6NZY4 707 aaKnown RBP8.89□□□□□ -0.99
NUP50-217ENST00000491860 DCUN1D2Q6PH85 259 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 WDR59Q6PJI9 974 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 GDPD4Q6W3E5 623 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 GCNT7Q6ZNI0 430 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 Q6ZSR6 202 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 LSMEM2Q8N112 164 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 OR13H1Q8NG92 308 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 ATL2Q8NHH9 583 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 TPCN2Q8NHX9 752 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 JOSD2Q8TAC2 188 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 SLC30A5Q8TAD4 765 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 WDR48Q8TAF3 677 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 GPT2Q8TD30 523 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 CNPY3Q9BT09 278 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 C1QTNF2Q9BXJ5 285 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 CPEB1Q9BZB8 566 aaKnown RBP8.89□□□□□ -0.99
NUP50-217ENST00000491860 TM6SF2Q9BZW4 377 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 TTYH3Q9C0H2 523 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 TMPRSS4Q9NRS4 437 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 GPR27Q9NS67 375 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 DKK3Q9UBP4 350 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 DNAI1Q9UI46 699 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 FCF1Q9Y324 198 aaKnown RBP8.89□□□□□ -0.99
NUP50-217ENST00000491860 MYLKQ15746 1914 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 TMEM110-MUSTN1A8MSY1 372 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 SMTNL1A8MU46 457 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 TPP1O14773 563 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 BUB1O43683 1085 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 SIGLEC6O43699 453 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 SDC3O75056 442 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 ZIC2O95409 532 aaPredicted RBP8.88□□□□□ -0.99
NUP50-217ENST00000491860 PAK4O96013 591 aaPredicted RBP8.88□□□□□ -0.99
NUP50-217ENST00000491860 CSF2P04141 144 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 NME1P15531 152 aaKnown RBP8.88□□□□□ -0.99
NUP50-217ENST00000491860 XPAP23025 273 aaPredicted RBP8.88□□□□□ -0.99
NUP50-217ENST00000491860 NFKBIAP25963 317 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 ACVRL1P37023 503 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 ABCG1P45844 678 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 RPIAP49247 311 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 BLKP51451 505 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 THOP1P52888 689 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 PTP4A2Q12974 167 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 TARDBPQ13148 414 aaKnown RBP eCLIP8.88□□□□□ -0.99
NUP50-217ENST00000491860 ARTNQ5T4W7 220 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 SEL1L3Q68CR1 1132 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 ACAD10Q6JQN1 1059 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 SCYL2Q6P3W7 929 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 MON1BQ7L1V2 547 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 PARS2Q7L3T8 475 aaKnown RBP8.88□□□□□ -0.99
NUP50-217ENST00000491860 TTC7BQ86TV6 843 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 DNAAF5Q86Y56 855 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 UMODL1-AS1Q8N2C9 162 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 SDR16C5Q8N3Y7 309 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 SLC25A45Q8N413 288 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 DCBLD1Q8N8Z6 715 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 CXorf40AQ8TE69 158 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 KLK6Q92876 244 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 MCEEQ96PE7 176 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 DEPDC7Q96QD5 511 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 ABCG4Q9H172 646 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 PARVAQ9NVD7 372 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 DNAJC28Q9NX36 388 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 SPASTQ9UBP0 616 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 SALL4Q9UJQ4 1053 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 ZFR2Q9UPR6 939 aaKnown RBP8.88□□□□□ -0.99
NUP50-217ENST00000491860 AK5Q9Y6K8 562 aa8.88□□□□□ -0.99
NUP50-217ENST00000491860 SHROOM3Q8TF72 1996 aa8.87□□□□□ -0.99
NUP50-217ENST00000491860 CFAP69A5D8W1 941 aa8.87□□□□□ -0.99
NUP50-217ENST00000491860 FAM149AA5PLN7 773 aa8.87□□□□□ -0.99
NUP50-217ENST00000491860 ARHGAP42A6NI28 874 aa8.87□□□□□ -0.99
NUP50-217ENST00000491860 EPHB6O15197 1021 aa8.87□□□□□ -0.99
NUP50-217ENST00000491860 ATXN7O15265 892 aaPredicted RBP8.87□□□□□ -0.99
NUP50-217ENST00000491860 CCP110O43303 1012 aa8.87□□□□□ -0.99
NUP50-217ENST00000491860 AQP9O43315 295 aa8.87□□□□□ -0.99
NUP50-217ENST00000491860 CREB3O43889 395 aa8.87□□□□□ -0.99
NUP50-217ENST00000491860 C1QL1O75973 258 aa8.87□□□□□ -0.99
NUP50-217ENST00000491860 TM7SF2O76062 418 aa8.87□□□□□ -0.99
NUP50-217ENST00000491860 RNF8O76064 485 aa8.87□□□□□ -0.99
NUP50-217ENST00000491860 TMCC1O94876 653 aa8.87□□□□□ -0.99
NUP50-217ENST00000491860 CD160O95971 181 aa8.87□□□□□ -0.99
NUP50-217ENST00000491860 MT-CO3P00414 261 aa8.87□□□□□ -0.99
NUP50-217ENST00000491860 UGT2B4P06133 528 aa8.87□□□□□ -0.99
NUP50-217ENST00000491860 TNFAIP3P21580 790 aa8.87□□□□□ -0.99
NUP50-217ENST00000491860 HTR1BP28222 390 aa8.87□□□□□ -0.99
NUP50-217ENST00000491860 CSNK1DP48730 415 aa8.87□□□□□ -0.99
NUP50-217ENST00000491860 KLK7P49862 253 aa8.87□□□□□ -0.99
NUP50-217ENST00000491860 PEX5P50542 639 aa8.87□□□□□ -0.99
NUP50-217ENST00000491860 NDST2P52849 883 aa8.87□□□□□ -0.99
NUP50-217ENST00000491860 CLDN2P57739 230 aa8.87□□□□□ -0.99
NUP50-217ENST00000491860 RHOAP61586 193 aa8.87□□□□□ -0.99
NUP50-217ENST00000491860 INSM1Q01101 510 aaPredicted RBP8.87□□□□□ -0.99
NUP50-217ENST00000491860 SERINC3Q13530 473 aa8.87□□□□□ -0.99
NUP50-217ENST00000491860 RFTN1Q14699 578 aaPredicted RBP8.87□□□□□ -0.99
NUP50-217ENST00000491860 PPP1R15BQ5SWA1 713 aa8.87□□□□□ -0.99
NUP50-217ENST00000491860 CFAP58Q5T655 872 aa8.87□□□□□ -0.99
NUP50-217ENST00000491860 TMCO4Q5TGY1 634 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms