RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 ALS2CR12Q96Q35 445 aa15.29■□□□□ 0.04
CDC42SE1-205ENST00000491825 FAM129BQ96TA1 746 aa15.29■□□□□ 0.04
CDC42SE1-205ENST00000491825 SLCO3A1Q9UIG8 710 aa15.29■□□□□ 0.04
CDC42SE1-205ENST00000491825 AMFRQ9UKV5 643 aa15.29■□□□□ 0.04
CDC42SE1-205ENST00000491825 FZD4Q9ULV1 537 aa15.29■□□□□ 0.04
CDC42SE1-205ENST00000491825 APOBEC2Q9Y235 224 aaKnown RBP15.29■□□□□ 0.04
CDC42SE1-205ENST00000491825 HS3ST2Q9Y278 367 aa15.29■□□□□ 0.04
CDC42SE1-205ENST00000491825 EDDM13A0A1B0GTR0 161 aa15.28■□□□□ 0.04
CDC42SE1-205ENST00000491825 A0A1W2PP55 124 aa15.28■□□□□ 0.04
CDC42SE1-205ENST00000491825 A0A1W2PPC4 97 aa15.28■□□□□ 0.04
CDC42SE1-205ENST00000491825 H0Y8X5 98 aa15.28■□□□□ 0.04
CDC42SE1-205ENST00000491825 PCDHGA12O60330 932 aa15.28■□□□□ 0.04
CDC42SE1-205ENST00000491825 ZMPSTE24O75844 475 aa15.28■□□□□ 0.04
CDC42SE1-205ENST00000491825 PEX5P50542 639 aa15.28■□□□□ 0.04
CDC42SE1-205ENST00000491825 RACK1P63244 317 aaKnown RBP15.28■□□□□ 0.04
CDC42SE1-205ENST00000491825 MMRN1Q13201 1228 aa15.28■□□□□ 0.04
CDC42SE1-205ENST00000491825 ZFYVE27Q5T4F4 411 aa15.28■□□□□ 0.04
CDC42SE1-205ENST00000491825 NCEH1Q6PIU2 408 aa15.28■□□□□ 0.04
CDC42SE1-205ENST00000491825 MMAAQ8IVH4 418 aaKnown RBP15.28■□□□□ 0.04
CDC42SE1-205ENST00000491825 ARHGAP12Q8IWW6 846 aa15.28■□□□□ 0.04
CDC42SE1-205ENST00000491825 REXO1L1PQ8IX06 675 aa15.28■□□□□ 0.04
CDC42SE1-205ENST00000491825 AADATQ8N5Z0 425 aa15.28■□□□□ 0.04
CDC42SE1-205ENST00000491825 OR7D4Q8NG98 312 aa15.28■□□□□ 0.04
CDC42SE1-205ENST00000491825 PTPRN2Q92932 1015 aa15.28■□□□□ 0.04
CDC42SE1-205ENST00000491825 FAM131CQ96AQ9 280 aa15.28■□□□□ 0.04
CDC42SE1-205ENST00000491825 HES6Q96HZ4 224 aa15.28■□□□□ 0.04
CDC42SE1-205ENST00000491825 SLC6A18Q96N87 628 aa15.28■□□□□ 0.04
CDC42SE1-205ENST00000491825 RNF157Q96PX1 679 aa15.28■□□□□ 0.04
CDC42SE1-205ENST00000491825 NEUROG2Q9H2A3 272 aa15.28■□□□□ 0.04
CDC42SE1-205ENST00000491825 ATP13A1Q9HD20 1204 aa15.28■□□□□ 0.04
CDC42SE1-205ENST00000491825 VPS51Q9UID3 782 aa15.28■□□□□ 0.04
CDC42SE1-205ENST00000491825 NCKAP1Q9Y2A7 1128 aa15.28■□□□□ 0.04
CDC42SE1-205ENST00000491825 GOLGA6L9A6NEM1 432 aa15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 ZSCAN5CA6NGD5 496 aaPredicted RBP15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 RASA4BC9J798 803 aa15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 KCNK3O14649 394 aa15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 RASA4O43374 803 aa15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 RNASEH1O60930 286 aaKnown RBP15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 ZRANB2O95218 330 aaKnown RBP eCLIP15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 FTCDO95954 541 aa15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 ATXN1LP0C7T5 689 aaKnown RBP15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 AMPD1P23109 780 aa15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 PTPN7P35236 360 aa15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 ACVRL1P37023 503 aa15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 CDKN2BP42772 138 aa15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 STK19P49842 368 aaPredicted RBP15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 CCT8P50990 548 aa15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 CLCN6P51797 869 aa15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 GEMIN4P57678 1058 aaKnown RBP15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 COPS2P61201 443 aa15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 SERINC3Q13530 473 aa15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 PAFAH1B3Q15102 231 aaKnown RBP15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 PPP2R5EQ16537 467 aa15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 ODF2Q5BJF6 829 aa15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 TFDP3Q5H9I0 405 aa15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 NCBP2-AS2Q69YL0 99 aa15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 SLC9A4Q6AI14 798 aa15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 RETSATQ6NUM9 610 aa15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 RCOR2Q8IZ40 523 aa15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 PQLC3Q8N755 202 aa15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 UBL4BQ8N7F7 174 aa15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 OR2T34Q8NGX1 318 aa15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 RHBDD1Q8TEB9 315 aa15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 HMCESQ96FZ2 354 aa15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 RPL10LQ96L21 214 aaKnown RBP15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 CDC6Q99741 560 aa15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 ETNK2Q9NVF9 386 aa15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 SLC25A13Q9UJS0 675 aa15.27■□□□□ 0.04
CDC42SE1-205ENST00000491825 DSPP15924 2871 aaKnown RBP15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 FAM47DPA6NHR8 397 aa15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 ARHGAP42A6NI28 874 aa15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 CBX4O00257 560 aa15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 VILLO15195 856 aa15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 KDELR3O43731 214 aa15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 ATP9BO43861 1147 aa15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 SNAP91O60641 907 aa15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 RNASEH2AO75792 299 aaKnown RBP15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 WNT1P04628 370 aa15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 TNNT1P13805 278 aa15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 VAV1P15498 845 aa15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 SLC8A1P32418 973 aa15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 DRD3P35462 400 aa15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 PSMD8P48556 350 aa15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 NUMBP49757 651 aa15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 SERPINH1P50454 418 aaKnown RBP15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 ADPRHP54922 357 aa15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 RWDD2BP57060 319 aa15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 ARF5P84085 180 aa15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 SLC20A2Q08357 652 aa15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 ELAVL3Q14576 367 aaKnown RBP15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 SUZ12Q15022 739 aaKnown RBP15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 MFSD7Q6UXD7 560 aa15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 SPOCD1Q6ZMY3 1216 aa15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 TMPRSS7Q7RTY8 843 aa15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 STK40Q8N2I9 435 aa15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 SH2D3CQ8N5H7 860 aa15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 GANCQ8TET4 914 aa15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 FRS2Q8WU20 508 aa15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 ALG3Q92685 438 aa15.26■□□□□ 0.03
CDC42SE1-205ENST00000491825 SPON2Q9BUD6 331 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms