RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 RAD51Q06609 339 aa31.82■■■□□ 2.68
LDB1-204ENST00000490751 PPP6R3Q5H9R7 873 aaPredicted RBP31.82■■■□□ 2.68
LDB1-204ENST00000490751 GDPD4Q6W3E5 623 aa31.82■■■□□ 2.68
LDB1-204ENST00000490751 GCNT7Q6ZNI0 430 aa31.82■■■□□ 2.68
LDB1-204ENST00000490751 RFX8Q6ZV50 586 aa31.82■■■□□ 2.68
LDB1-204ENST00000490751 SLC17A9Q9BYT1 436 aa31.82■■■□□ 2.68
LDB1-204ENST00000490751 LHX3Q9UBR4 397 aa31.82■■■□□ 2.68
LDB1-204ENST00000490751 UBA2Q9UBT2 640 aaPredicted RBP31.82■■■□□ 2.68
LDB1-204ENST00000490751 USP24Q9UPU5 2620 aa31.82■■■□□ 2.68
LDB1-204ENST00000490751 AKAP13Q12802 2813 aa31.82■■■□□ 2.68
LDB1-204ENST00000490751 CLDN2P57739 230 aa31.81■■■□□ 2.68
LDB1-204ENST00000490751 FGL2Q14314 439 aa31.81■■■□□ 2.68
LDB1-204ENST00000490751 PSTKQ8IV42 348 aaKnown RBP31.81■■■□□ 2.68
LDB1-204ENST00000490751 OR13H1Q8NG92 308 aa31.81■■■□□ 2.68
LDB1-204ENST00000490751 EXOC2Q96KP1 924 aa31.81■■■□□ 2.68
LDB1-204ENST00000490751 NCAPGQ9BPX3 1015 aa31.81■■■□□ 2.68
LDB1-204ENST00000490751 SLC39A8Q9C0K1 460 aa31.81■■■□□ 2.68
LDB1-204ENST00000490751 PDFQ9HBH1 243 aa31.81■■■□□ 2.68
LDB1-204ENST00000490751 GGT7Q9UJ14 662 aa31.81■■■□□ 2.68
LDB1-204ENST00000490751 ITM2BQ9Y287 266 aa31.81■■■□□ 2.68
LDB1-204ENST00000490751 LUC7L2Q9Y383 392 aaKnown RBP31.81■■■□□ 2.68
LDB1-204ENST00000490751 GYPCP04921 128 aa31.8■■■□□ 2.68
LDB1-204ENST00000490751 CYTH1Q15438 398 aa31.8■■■□□ 2.68
LDB1-204ENST00000490751 SKOR2Q2VWA4 1001 aaPredicted RBP31.8■■■□□ 2.68
LDB1-204ENST00000490751 EID2Q8N6I1 236 aa31.8■■■□□ 2.68
LDB1-204ENST00000490751 CALN1Q9BXU9 219 aa31.8■■■□□ 2.68
LDB1-204ENST00000490751 ARHGAP42A6NI28 874 aa31.79■■■□□ 2.68
LDB1-204ENST00000490751 J3KR12 359 aa31.79■■■□□ 2.68
LDB1-204ENST00000490751 NEMP1O14524 444 aa31.79■■■□□ 2.68
LDB1-204ENST00000490751 TSPAN6O43657 245 aa31.79■■■□□ 2.68
LDB1-204ENST00000490751 PAK4O96013 591 aaPredicted RBP31.79■■■□□ 2.68
LDB1-204ENST00000490751 ERCC2P18074 760 aa31.79■■■□□ 2.68
LDB1-204ENST00000490751 CCDC157Q569K6 752 aa31.79■■■□□ 2.68
LDB1-204ENST00000490751 ABI3BPQ7Z7G0 1075 aa31.79■■■□□ 2.68
LDB1-204ENST00000490751 ZSCAN30Q86W11 494 aa31.79■■■□□ 2.68
LDB1-204ENST00000490751 CNDP2Q96KP4 475 aaKnown RBP31.79■■■□□ 2.68
LDB1-204ENST00000490751 THAP2Q9H0W7 228 aa31.79■■■□□ 2.68
LDB1-204ENST00000490751 MFHAS1Q9Y4C4 1052 aa31.79■■■□□ 2.68
LDB1-204ENST00000490751 PLXNB3Q9ULL4 1909 aa31.79■■■□□ 2.68
LDB1-204ENST00000490751 A0A087X0T9 212 aa31.78■■■□□ 2.68
LDB1-204ENST00000490751 SPINT1O43278 529 aa31.78■■■□□ 2.68
LDB1-204ENST00000490751 PRAMEF11O60813 436 aa31.78■■■□□ 2.68
LDB1-204ENST00000490751 FAM228BP0C875 321 aa31.78■■■□□ 2.68
LDB1-204ENST00000490751 PCK1P35558 622 aa31.78■■■□□ 2.68
LDB1-204ENST00000490751 PAPOLAP51003 745 aaKnown RBP31.78■■■□□ 2.68
LDB1-204ENST00000490751 ACAP1Q15027 740 aa31.78■■■□□ 2.68
LDB1-204ENST00000490751 LRRC73Q5JTD7 316 aa31.78■■■□□ 2.68
LDB1-204ENST00000490751 KANSL1Q7Z3B3 1105 aa31.78■■■□□ 2.68
LDB1-204ENST00000490751 KDF1Q8NAX2 398 aaPredicted RBP31.78■■■□□ 2.68
LDB1-204ENST00000490751 ARHGEF26Q96DR7 871 aa31.78■■■□□ 2.68
LDB1-204ENST00000490751 XPO4Q9C0E2 1151 aaKnown RBP31.78■■■□□ 2.68
LDB1-204ENST00000490751 HS3ST3A1Q9Y663 406 aa31.78■■■□□ 2.68
LDB1-204ENST00000490751 TMEM8BA6NDV4 472 aa31.77■■■□□ 2.68
LDB1-204ENST00000490751 IGLON5A6NGN9 336 aa31.77■■■□□ 2.68
LDB1-204ENST00000490751 A6NNZ2 444 aa31.77■■■□□ 2.68
LDB1-204ENST00000490751 ENC1O14682 589 aa31.77■■■□□ 2.68
LDB1-204ENST00000490751 RAD51BO15315 384 aa31.77■■■□□ 2.68
LDB1-204ENST00000490751 INSIG1O15503 277 aa31.77■■■□□ 2.68
LDB1-204ENST00000490751 SDC3O75056 442 aa31.77■■■□□ 2.68
LDB1-204ENST00000490751 LDOC1O95751 146 aaPredicted RBP31.77■■■□□ 2.68
LDB1-204ENST00000490751 ZNF135P52742 658 aaPredicted RBP31.77■■■□□ 2.68
LDB1-204ENST00000490751 NFKBIBQ15653 356 aa31.77■■■□□ 2.68
LDB1-204ENST00000490751 PTAR1Q7Z6K3 402 aaPredicted RBP31.77■■■□□ 2.68
LDB1-204ENST00000490751 TTC7BQ86TV6 843 aa31.77■■■□□ 2.68
LDB1-204ENST00000490751 NPWQ8N729 165 aa31.77■■■□□ 2.68
LDB1-204ENST00000490751 BMFQ96LC9 184 aa31.77■■■□□ 2.68
LDB1-204ENST00000490751 C1QTNF2Q9BXJ5 285 aa31.77■■■□□ 2.68
LDB1-204ENST00000490751 CWC15Q9P013 229 aaKnown RBP31.77■■■□□ 2.68
LDB1-204ENST00000490751 ASPMQ8IZT6 3477 aa31.76■■■□□ 2.68
LDB1-204ENST00000490751 AREL1O15033 823 aa31.76■■■□□ 2.67
LDB1-204ENST00000490751 KRT37O76014 449 aa31.76■■■□□ 2.67
LDB1-204ENST00000490751 TCF4P15884 667 aa31.76■■■□□ 2.67
LDB1-204ENST00000490751 IL1R2P27930 398 aa31.76■■■□□ 2.67
LDB1-204ENST00000490751 CASP14P31944 242 aa31.76■■■□□ 2.67
LDB1-204ENST00000490751 SGCGQ13326 291 aa31.76■■■□□ 2.67
LDB1-204ENST00000490751 SMTNL2Q2TAL5 461 aa31.76■■■□□ 2.67
LDB1-204ENST00000490751 AFMIDQ63HM1 303 aa31.76■■■□□ 2.67
LDB1-204ENST00000490751 ARHGAP12Q8IWW6 846 aa31.76■■■□□ 2.67
LDB1-204ENST00000490751 SLC22A18ASQ8N1D0 253 aa31.76■■■□□ 2.67
LDB1-204ENST00000490751 FAM174AQ8TBP5 190 aa31.76■■■□□ 2.67
LDB1-204ENST00000490751 CPEB1Q9BZB8 566 aaKnown RBP31.76■■■□□ 2.67
LDB1-204ENST00000490751 KLHL11Q9NVR0 708 aa31.76■■■□□ 2.67
LDB1-204ENST00000490751 IGF2RP11717 2491 aa31.75■■■□□ 2.67
LDB1-204ENST00000490751 POM121BA6NF01 834 aa31.75■■■□□ 2.67
LDB1-204ENST00000490751 TPM3P06753 285 aa31.75■■■□□ 2.67
LDB1-204ENST00000490751 HCAR3P49019 387 aa31.75■■■□□ 2.67
LDB1-204ENST00000490751 PIGHQ14442 188 aaPredicted RBP31.75■■■□□ 2.67
LDB1-204ENST00000490751 KYAT3Q6YP21 454 aaKnown RBP31.75■■■□□ 2.67
LDB1-204ENST00000490751 CCNI2Q6ZMN8 369 aaPredicted RBP31.75■■■□□ 2.67
LDB1-204ENST00000490751 Q6ZSR6 202 aa31.75■■■□□ 2.67
LDB1-204ENST00000490751 TMPRSS7Q7RTY8 843 aa31.75■■■□□ 2.67
LDB1-204ENST00000490751 ZWILCHQ9H900 591 aa31.75■■■□□ 2.67
LDB1-204ENST00000490751 DKK3Q9UBP4 350 aa31.75■■■□□ 2.67
LDB1-204ENST00000490751 ZMIZ1Q9ULJ6 1067 aa31.75■■■□□ 2.67
LDB1-204ENST00000490751 TDRD6O60522 2096 aaKnown RBP31.74■■■□□ 2.67
LDB1-204ENST00000490751 DFFAO00273 331 aa31.74■■■□□ 2.67
LDB1-204ENST00000490751 PIGNO95427 931 aa31.74■■■□□ 2.67
LDB1-204ENST00000490751 DNAJC3Q13217 504 aa31.74■■■□□ 2.67
LDB1-204ENST00000490751 DPYSQ14117 519 aa31.74■■■□□ 2.67
LDB1-204ENST00000490751 DPYSL2Q16555 572 aa31.74■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms