RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 ASB12Q8WXK4 309 aa13.91□□□□□ -0.18
EXOSC3-207ENST00000490516 TMX3Q96JJ7 454 aa13.91□□□□□ -0.18
EXOSC3-207ENST00000490516 RPRD1AQ96P16 312 aaPredicted RBP13.91□□□□□ -0.18
EXOSC3-207ENST00000490516 MUC3BQ9H195 1237 aa13.91□□□□□ -0.18
EXOSC3-207ENST00000490516 CUEDC2Q9H467 287 aa13.91□□□□□ -0.18
EXOSC3-207ENST00000490516 MBNL1Q9NR56 388 aaKnown RBP13.91□□□□□ -0.18
EXOSC3-207ENST00000490516 LRIT1Q9P2V4 623 aa13.91□□□□□ -0.18
EXOSC3-207ENST00000490516 VPS51Q9UID3 782 aa13.91□□□□□ -0.18
EXOSC3-207ENST00000490516 SMC3Q9UQE7 1217 aa13.91□□□□□ -0.18
EXOSC3-207ENST00000490516 ANKRD36A6QL64 1941 aa13.91□□□□□ -0.18
EXOSC3-207ENST00000490516 PDZD2O15018 2839 aa13.91□□□□□ -0.18
EXOSC3-207ENST00000490516 PRRC2CQ9Y520 2896 aaKnown RBP13.9□□□□□ -0.18
EXOSC3-207ENST00000490516 TSPAN6O43657 245 aa13.9□□□□□ -0.18
EXOSC3-207ENST00000490516 PNLIPP16233 465 aa13.9□□□□□ -0.18
EXOSC3-207ENST00000490516 PDCP20941 246 aa13.9□□□□□ -0.18
EXOSC3-207ENST00000490516 ABL2P42684 1182 aa13.9□□□□□ -0.18
EXOSC3-207ENST00000490516 BLKP51451 505 aa13.9□□□□□ -0.18
EXOSC3-207ENST00000490516 PITX1P78337 314 aaPredicted RBP13.9□□□□□ -0.18
EXOSC3-207ENST00000490516 B4GALNT1Q00973 533 aa13.9□□□□□ -0.18
EXOSC3-207ENST00000490516 STK4Q13043 487 aa13.9□□□□□ -0.18
EXOSC3-207ENST00000490516 ARHGEF7Q14155 803 aa13.9□□□□□ -0.18
EXOSC3-207ENST00000490516 KRTAP21-3Q3LHN1 58 aa13.9□□□□□ -0.18
EXOSC3-207ENST00000490516 AMZ1Q400G9 498 aa13.9□□□□□ -0.18
EXOSC3-207ENST00000490516 ZC3H18Q86VM9 953 aaKnown RBP13.9□□□□□ -0.18
EXOSC3-207ENST00000490516 CCDC13Q8IYE1 715 aa13.9□□□□□ -0.18
EXOSC3-207ENST00000490516 ATP6V0D2Q8N8Y2 350 aa13.9□□□□□ -0.18
EXOSC3-207ENST00000490516 KIAA0895Q8NCT3 520 aa13.9□□□□□ -0.18
EXOSC3-207ENST00000490516 PDCD6IPQ8WUM4 868 aaKnown RBP13.9□□□□□ -0.18
EXOSC3-207ENST00000490516 TFAP2BQ92481 460 aa13.9□□□□□ -0.18
EXOSC3-207ENST00000490516 FAM149B1Q96BN6 582 aa13.9□□□□□ -0.18
EXOSC3-207ENST00000490516 TCTN2Q96GX1 697 aa13.9□□□□□ -0.18
EXOSC3-207ENST00000490516 NUDT22Q9BRQ3 303 aa13.9□□□□□ -0.18
EXOSC3-207ENST00000490516 TMEM8AQ9HCN3 771 aa13.9□□□□□ -0.18
EXOSC3-207ENST00000490516 PILRAQ9UKJ1 303 aa13.9□□□□□ -0.18
EXOSC3-207ENST00000490516 KCNMB2Q9Y691 235 aa13.9□□□□□ -0.18
EXOSC3-207ENST00000490516 IGHV5-10-1A0A0J9YXX1 117 aa13.89□□□□□ -0.19
EXOSC3-207ENST00000490516 MKRN2OSH3BPM6 223 aa13.89□□□□□ -0.19
EXOSC3-207ENST00000490516 PDXKO00764 312 aa13.89□□□□□ -0.19
EXOSC3-207ENST00000490516 NEMP1O14524 444 aa13.89□□□□□ -0.19
EXOSC3-207ENST00000490516 HGSO14964 777 aaPredicted RBP13.89□□□□□ -0.19
EXOSC3-207ENST00000490516 B4GAT1O43505 415 aa13.89□□□□□ -0.19
EXOSC3-207ENST00000490516 EIF5BO60841 1220 aaKnown RBP13.89□□□□□ -0.19
EXOSC3-207ENST00000490516 ZNF821O75541 412 aaPredicted RBP13.89□□□□□ -0.19
EXOSC3-207ENST00000490516 CPNE6O95741 557 aa13.89□□□□□ -0.19
EXOSC3-207ENST00000490516 PDGFAP04085 211 aa13.89□□□□□ -0.19
EXOSC3-207ENST00000490516 VDRP11473 427 aa13.89□□□□□ -0.19
EXOSC3-207ENST00000490516 PDIA4P13667 645 aaKnown RBP13.89□□□□□ -0.19
EXOSC3-207ENST00000490516 PRF1P14222 555 aa13.89□□□□□ -0.19
EXOSC3-207ENST00000490516 GGCXP38435 758 aa13.89□□□□□ -0.19
EXOSC3-207ENST00000490516 KRT83P78385 493 aa13.89□□□□□ -0.19
EXOSC3-207ENST00000490516 MRPL49Q13405 166 aaKnown RBP13.89□□□□□ -0.19
EXOSC3-207ENST00000490516 CUL4BQ13620 913 aa13.89□□□□□ -0.19
EXOSC3-207ENST00000490516 SLC39A14Q15043 492 aa13.89□□□□□ -0.19
EXOSC3-207ENST00000490516 KCTD16Q68DU8 428 aa13.89□□□□□ -0.19
EXOSC3-207ENST00000490516 LCLAT1Q6UWP7 414 aa13.89□□□□□ -0.19
EXOSC3-207ENST00000490516 ZSCAN30Q86W11 494 aa13.89□□□□□ -0.19
EXOSC3-207ENST00000490516 PRR7Q8TB68 274 aa13.89□□□□□ -0.19
EXOSC3-207ENST00000490516 STARD8Q92502 1023 aa13.89□□□□□ -0.19
EXOSC3-207ENST00000490516 KIAA1143Q96AT1 154 aaPredicted RBP13.89□□□□□ -0.19
EXOSC3-207ENST00000490516 MOCOSQ96EN8 888 aa13.89□□□□□ -0.19
EXOSC3-207ENST00000490516 FAXDC2Q96IV6 333 aa13.89□□□□□ -0.19
EXOSC3-207ENST00000490516 CCDC74BQ96LY2 380 aa13.89□□□□□ -0.19
EXOSC3-207ENST00000490516 HAPLN3Q96S86 360 aa13.89□□□□□ -0.19
EXOSC3-207ENST00000490516 VANGL2Q9ULK5 521 aa13.89□□□□□ -0.19
EXOSC3-207ENST00000490516 PVALEFA0A1B0GWK0 134 aa13.88□□□□□ -0.19
EXOSC3-207ENST00000490516 FBXO21O94952 628 aa13.88□□□□□ -0.19
EXOSC3-207ENST00000490516 RASGRP1O95267 797 aa13.88□□□□□ -0.19
EXOSC3-207ENST00000490516 TRUB2O95900 331 aaKnown RBP13.88□□□□□ -0.19
EXOSC3-207ENST00000490516 LDLRP01130 860 aa13.88□□□□□ -0.19
EXOSC3-207ENST00000490516 TCN2P20062 427 aa13.88□□□□□ -0.19
EXOSC3-207ENST00000490516 OR1D5P58170 312 aa13.88□□□□□ -0.19
EXOSC3-207ENST00000490516 C14orf28Q4W4Y0 310 aa13.88□□□□□ -0.19
EXOSC3-207ENST00000490516 KRT39Q6A163 491 aa13.88□□□□□ -0.19
EXOSC3-207ENST00000490516 OGFOD3Q6PK18 319 aa13.88□□□□□ -0.19
EXOSC3-207ENST00000490516 ENPP7Q6UWV6 458 aa13.88□□□□□ -0.19
EXOSC3-207ENST00000490516 INTS8Q75QN2 995 aaKnown RBP13.88□□□□□ -0.19
EXOSC3-207ENST00000490516 IQUBQ8NA54 791 aa13.88□□□□□ -0.19
EXOSC3-207ENST00000490516 USP28Q96RU2 1077 aa13.88□□□□□ -0.19
EXOSC3-207ENST00000490516 HEPHQ9BQS7 1158 aa13.88□□□□□ -0.19
EXOSC3-207ENST00000490516 ZSWIM1Q9BR11 485 aa13.88□□□□□ -0.19
EXOSC3-207ENST00000490516 C2orf49Q9BVC5 232 aaPredicted RBP13.88□□□□□ -0.19
EXOSC3-207ENST00000490516 DDA1Q9BW61 102 aa13.88□□□□□ -0.19
EXOSC3-207ENST00000490516 ZSCAN16Q9H4T2 348 aaPredicted RBP13.88□□□□□ -0.19
EXOSC3-207ENST00000490516 RAB20Q9NX57 234 aa13.88□□□□□ -0.19
EXOSC3-207ENST00000490516 SLC39A1Q9NY26 324 aa13.88□□□□□ -0.19
EXOSC3-207ENST00000490516 ERRFI1Q9UJM3 462 aaPredicted RBP13.88□□□□□ -0.19
EXOSC3-207ENST00000490516 TBC1D30Q9Y2I9 924 aa13.88□□□□□ -0.19
EXOSC3-207ENST00000490516 MAP4K5Q9Y4K4 846 aa13.88□□□□□ -0.19
EXOSC3-207ENST00000490516 MRPS18BQ9Y676 258 aaKnown RBP13.88□□□□□ -0.19
EXOSC3-207ENST00000490516 MED13LQ71F56 2210 aa13.88□□□□□ -0.19
EXOSC3-207ENST00000490516 HIVEP1P15822 2718 aa13.88□□□□□ -0.19
EXOSC3-207ENST00000490516 CSMD2Q7Z408 3487 aa13.88□□□□□ -0.19
EXOSC3-207ENST00000490516 C16orf96A6NNT2 1141 aa13.87□□□□□ -0.19
EXOSC3-207ENST00000490516 B4DGG1 531 aa13.87□□□□□ -0.19
EXOSC3-207ENST00000490516 TCP11X1B4DZS4 312 aa13.87□□□□□ -0.19
EXOSC3-207ENST00000490516 M0QYV0 167 aa13.87□□□□□ -0.19
EXOSC3-207ENST00000490516 MAPK13O15264 365 aa13.87□□□□□ -0.19
EXOSC3-207ENST00000490516 MMP20O60882 483 aa13.87□□□□□ -0.19
EXOSC3-207ENST00000490516 CALCAP01258 141 aa13.87□□□□□ -0.19
EXOSC3-207ENST00000490516 IGLV3-25P01717 112 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms