RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 CCDC127Q96BQ5 260 aa7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 CYFIP2Q96F07 1278 aa7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 CALML4Q96GE6 196 aa7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 TBATAQ96M53 351 aa7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 KLF6Q99612 283 aaPredicted RBP7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 DUSP16Q9BY84 665 aa7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 SPASTQ9UBP0 616 aa7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 APOBEC3BQ9UH17 382 aaKnown RBP7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 SFMBT1Q9UHJ3 866 aa7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 RNF215Q9Y6U7 377 aa7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 TNRC6AQ8NDV7 1962 aaKnown RBP7.29□□□□□ -1.24
PDLIM1-203ENST00000490391 ARHGEF17Q96PE2 2063 aaPredicted RBP7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 A0A1W2PNR3 127 aa7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 ADARB2-AS1A8MUL3 147 aa7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 TCP11X1B4DZS4 312 aa7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 C1QTNF3-AMACRE9PGA6 284 aa7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 RNF103O00237 685 aa7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 ALOX15BO15296 676 aa7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 STX6O43752 255 aa7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 ACSL4O60488 711 aa7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 SORBS2O94875 1100 aaKnown RBP7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 CTSLP07711 333 aa7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 ANXA6P08133 673 aa7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 FAM157BP0CG42 384 aa7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 TSHRP16473 764 aa7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 ASPAP45381 313 aa7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 RECQLP46063 649 aaPredicted RBP7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 PFN3P60673 137 aa7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 INCA1Q0VD86 236 aa7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 NCOA4Q13772 614 aa7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 TESK1Q15569 626 aa7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 ATP1A1-AS1Q5TC04 95 aa7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 TMEM164Q5U3C3 297 aa7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 RNF219Q5W0B1 726 aaPredicted RBP7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 ESRP1Q6NXG1 681 aaKnown RBP7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 ASB18Q6ZVZ8 466 aa7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 CCDC13Q8IYE1 715 aa7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 CACNA2D3Q8IZS8 1091 aa7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 CARNMT1Q8N4J0 409 aa7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 PCDH19Q8TAB3 1148 aa7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 BTN2A2Q8WVV5 523 aa7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 NDRG1Q92597 394 aaKnown RBP7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 SRRTQ9BXP5 876 aaKnown RBP7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 KIAA1586Q9HCI6 787 aa7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 OLA1Q9NTK5 396 aaKnown RBP7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 ENTPD4Q9Y227 616 aa7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 KCNMB2Q9Y691 235 aa7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 CSPG4Q6UVK1 2322 aa7.28□□□□□ -1.24
PDLIM1-203ENST00000490391 LRP4O75096 1905 aa7.27□□□□□ -1.25
PDLIM1-203ENST00000490391 ATP9BO43861 1147 aa7.27□□□□□ -1.25
PDLIM1-203ENST00000490391 RAD1O60671 282 aa7.27□□□□□ -1.25
PDLIM1-203ENST00000490391 DIAPH2O60879 1101 aa7.27□□□□□ -1.25
PDLIM1-203ENST00000490391 LUC7L3O95232 432 aaKnown RBP7.27□□□□□ -1.25
PDLIM1-203ENST00000490391 ZBED1O96006 694 aa7.27□□□□□ -1.25
PDLIM1-203ENST00000490391 PAK4O96013 591 aaPredicted RBP7.27□□□□□ -1.25
PDLIM1-203ENST00000490391 FGF3P11487 239 aaPredicted RBP7.27□□□□□ -1.25
PDLIM1-203ENST00000490391 CASP4P49662 377 aa7.27□□□□□ -1.25
PDLIM1-203ENST00000490391 NUMBP49757 651 aa7.27□□□□□ -1.25
PDLIM1-203ENST00000490391 NRG1Q02297 640 aaPredicted RBP7.27□□□□□ -1.25
PDLIM1-203ENST00000490391 CDH18Q13634 790 aa7.27□□□□□ -1.25
PDLIM1-203ENST00000490391 SEPT6Q14141 434 aa7.27□□□□□ -1.25
PDLIM1-203ENST00000490391 ARHGAP44Q17R89 818 aa7.27□□□□□ -1.25
PDLIM1-203ENST00000490391 CRTC2Q53ET0 693 aaPredicted RBP7.27□□□□□ -1.25
PDLIM1-203ENST00000490391 PRR30Q53SZ7 412 aaPredicted RBP7.27□□□□□ -1.25
PDLIM1-203ENST00000490391 SPRED1Q7Z699 444 aa7.27□□□□□ -1.25
PDLIM1-203ENST00000490391 SYT9Q86SS6 491 aa7.27□□□□□ -1.25
PDLIM1-203ENST00000490391 PIGZQ86VD9 579 aa7.27□□□□□ -1.25
PDLIM1-203ENST00000490391 CCNJLQ8IV13 435 aa7.27□□□□□ -1.25
PDLIM1-203ENST00000490391 PHACTR4Q8IZ21 702 aa7.27□□□□□ -1.25
PDLIM1-203ENST00000490391 AZIN2Q96A70 460 aa7.27□□□□□ -1.25
PDLIM1-203ENST00000490391 SSBP4Q9BWG4 385 aaPredicted RBP7.27□□□□□ -1.25
PDLIM1-203ENST00000490391 SLC17A9Q9BYT1 436 aa7.27□□□□□ -1.25
PDLIM1-203ENST00000490391 ULBP1Q9BZM6 244 aa7.27□□□□□ -1.25
PDLIM1-203ENST00000490391 SPRY4Q9C004 299 aa7.27□□□□□ -1.25
PDLIM1-203ENST00000490391 SEMA6CQ9H3T2 930 aa7.27□□□□□ -1.25
PDLIM1-203ENST00000490391 GULP1Q9UBP9 304 aa7.27□□□□□ -1.25
PDLIM1-203ENST00000490391 APPL1Q9UKG1 709 aa7.27□□□□□ -1.25
PDLIM1-203ENST00000490391 PILRAQ9UKJ1 303 aa7.27□□□□□ -1.25
PDLIM1-203ENST00000490391 CEP83Q9Y592 693 aa7.27□□□□□ -1.25
PDLIM1-203ENST00000490391 B3GALT1Q9Y5Z6 326 aa7.27□□□□□ -1.25
PDLIM1-203ENST00000490391 FLNAP21333 2647 aaKnown RBP7.27□□□□□ -1.25
PDLIM1-203ENST00000490391 LOC101059948A0A1B0GTJ6 334 aa7.26□□□□□ -1.25
PDLIM1-203ENST00000490391 ARHGAP10A1A4S6 786 aa7.26□□□□□ -1.25
PDLIM1-203ENST00000490391 YJEFN3A6XGL0 299 aa7.26□□□□□ -1.25
PDLIM1-203ENST00000490391 E7ENQ6 273 aa7.26□□□□□ -1.25
PDLIM1-203ENST00000490391 MKRN2OSH3BPM6 223 aa7.26□□□□□ -1.25
PDLIM1-203ENST00000490391 TGFB1I1O43294 461 aa7.26□□□□□ -1.25
PDLIM1-203ENST00000490391 PCDH8O95206 1070 aa7.26□□□□□ -1.25
PDLIM1-203ENST00000490391 KIF20AO95235 890 aa7.26□□□□□ -1.25
PDLIM1-203ENST00000490391 MOCS3O95396 460 aa7.26□□□□□ -1.25
PDLIM1-203ENST00000490391 C4BPAP04003 597 aaKnown RBP7.26□□□□□ -1.25
PDLIM1-203ENST00000490391 IRAK1P51617 712 aa7.26□□□□□ -1.25
PDLIM1-203ENST00000490391 TKTL1P51854 596 aa7.26□□□□□ -1.25
PDLIM1-203ENST00000490391 CLDN10P78369 228 aa7.26□□□□□ -1.25
PDLIM1-203ENST00000490391 BIRC3Q13489 604 aa7.26□□□□□ -1.25
PDLIM1-203ENST00000490391 NAA30Q147X3 362 aaPredicted RBP7.26□□□□□ -1.25
PDLIM1-203ENST00000490391 DCAF6Q58WW2 860 aa7.26□□□□□ -1.25
PDLIM1-203ENST00000490391 RILPL1Q5EBL4 403 aa7.26□□□□□ -1.25
PDLIM1-203ENST00000490391 MS4A13Q5J8X5 152 aa7.26□□□□□ -1.25
PDLIM1-203ENST00000490391 CERCAMQ5T4B2 595 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms