RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 ARL8BQ9NVJ2 186 aa3.56□□□□□ -1.84
CRNKL1-203ENST00000490258 RIC8BQ9NVN3 520 aa3.56□□□□□ -1.84
CRNKL1-203ENST00000490258 GALNT8Q9NY28 637 aa3.56□□□□□ -1.84
CRNKL1-203ENST00000490258 TAS2R14Q9NYV8 317 aa3.56□□□□□ -1.84
CRNKL1-203ENST00000490258 PLK2Q9NYY3 685 aa3.56□□□□□ -1.84
CRNKL1-203ENST00000490258 TMOD4Q9NZQ9 345 aa3.56□□□□□ -1.84
CRNKL1-203ENST00000490258 NYAP2Q9P242 653 aa3.56□□□□□ -1.84
CRNKL1-203ENST00000490258 ANKFY1Q9P2R3 1169 aa3.56□□□□□ -1.84
CRNKL1-203ENST00000490258 WRAP73Q9P2S5 460 aaPredicted RBP3.56□□□□□ -1.84
CRNKL1-203ENST00000490258 UVRAGQ9P2Y5 699 aa3.56□□□□□ -1.84
CRNKL1-203ENST00000490258 HSFX1Q9UBD0 423 aa3.56□□□□□ -1.84
CRNKL1-203ENST00000490258 SEL1LQ9UBV2 794 aa3.56□□□□□ -1.84
CRNKL1-203ENST00000490258 SLC24A2Q9UI40 661 aa3.56□□□□□ -1.84
CRNKL1-203ENST00000490258 DNAJC12Q9UKB3 198 aa3.56□□□□□ -1.84
CRNKL1-203ENST00000490258 GRID1Q9ULK0 1009 aa3.56□□□□□ -1.84
CRNKL1-203ENST00000490258 PHTF1Q9UMS5 762 aa3.56□□□□□ -1.84
CRNKL1-203ENST00000490258 GABRQQ9UN88 632 aa3.56□□□□□ -1.84
CRNKL1-203ENST00000490258 ZFR2Q9UPR6 939 aaKnown RBP3.56□□□□□ -1.84
CRNKL1-203ENST00000490258 TMX2Q9Y320 296 aa3.56□□□□□ -1.84
CRNKL1-203ENST00000490258 AFG3L2Q9Y4W6 797 aa3.56□□□□□ -1.84
CRNKL1-203ENST00000490258 NUB1Q9Y5A7 615 aa3.56□□□□□ -1.84
CRNKL1-203ENST00000490258 NR2E3Q9Y5X4 410 aa3.56□□□□□ -1.84
CRNKL1-203ENST00000490258 NUMBLQ9Y6R0 609 aa3.56□□□□□ -1.84
CRNKL1-203ENST00000490258 TDRD15B5MCY1 1934 aaKnown RBP3.56□□□□□ -1.84
CRNKL1-203ENST00000490258 COL4A6Q14031 1691 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 CITO14578 2027 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 ADGRA2Q96PE1 1338 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 MYADML2A6NDP7 307 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 TMEM221A6NGB7 291 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 RSPH10B2B2RC85 870 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 RASA4BC9J798 803 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 E9PMD0 336 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 H0Y3Z8 333 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 MEIS2O14770 477 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 NDC80O14777 642 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 CASQ2O14958 399 aaPredicted RBP3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 TM9SF1O15321 606 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 RASA4O43374 803 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 RNASEH1O60930 286 aaKnown RBP3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 RFPL3O75679 317 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 SPATA31D3P0C874 917 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 RSPH10BP0C881 870 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 FAM200BP0CF97 657 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 TROVE2P10155 538 aaKnown RBP eCLIP3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 ARP10275 920 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 ANPEPP15144 967 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 DESP17661 470 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 KLRC2P26717 231 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 RPA1P27694 616 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 PSMC2P35998 433 aaKnown RBP3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 SLC1A1P43005 524 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 SERPINB8P50452 374 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 NEK3P51956 506 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 STAT2P52630 851 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 ITGA8P53708 1063 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 POLE2P56282 527 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 BPIFB4P59827 614 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 GPC5P78333 572 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 CDK16Q00536 496 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 DSG1Q02413 1049 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 BTKQ06187 659 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 DNAJC3Q13217 504 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 TMED1Q13445 227 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 PRPF4BQ13523 1007 aaKnown RBP3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 APOFQ13790 326 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 TNFAIP1Q13829 316 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 BAATQ14032 418 aaPredicted RBP3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 SPIDRQ14159 915 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 SURF1Q15526 300 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 CCDC6Q16204 474 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 CCNG2Q16589 344 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 DNAL1Q4LDG9 190 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 ZC2HC1CQ53FD0 456 aaPredicted RBP3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 HERC4Q5GLZ8 1057 aaPredicted RBP3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 FAM47CQ5HY64 1035 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 TCTN3Q6NUS6 607 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 KLC3Q6P597 504 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 ZNF449Q6P9G9 518 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 DRICH1Q6PGQ1 229 aaPredicted RBP3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 DHRS4L2Q6PKH6 230 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 IZUMO2Q6UXV1 221 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 SPATA31D4Q6ZUB0 917 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 FAM47EQ6ZV65 393 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 USP50Q70EL3 339 aaPredicted RBP3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 ZNF365Q70YC5 407 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 CXXC5Q7LFL8 322 aaKnown RBP3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 DNAAF5Q86Y56 855 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 PDSS2Q86YH6 399 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 ZC3H7AQ8IWR0 971 aaKnown RBP3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 C12orf56Q8IXR9 622 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 CCDC105Q8IYK2 499 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 FAM186BQ8IYM0 893 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 CCDC89Q8N998 374 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 ETNPPLQ8TBG4 499 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 Q8TCH9 128 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 CD99L2Q8TCZ2 262 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 DIS3LQ8TF46 1054 aaKnown RBP3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 FAM172AQ8WUF8 416 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 TRAPPC12Q8WVT3 735 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 RSPH1Q8WYR4 309 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms