RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 SFMBT1Q9UHJ3 866 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 CORO1CQ9ULV4 474 aaPredicted RBP6.46□□□□□ -1.38
SF3A3-208ENST00000489537 ARL2BPQ9Y2Y0 163 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 USP15Q9Y4E8 981 aaPredicted RBP6.46□□□□□ -1.38
SF3A3-208ENST00000489537 IRAK3Q9Y616 596 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 RPS6KL1Q9Y6S9 549 aa6.46□□□□□ -1.38
SF3A3-208ENST00000489537 PRRC2BQ5JSZ5 2229 aaKnown RBP6.46□□□□□ -1.38
SF3A3-208ENST00000489537 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.45□□□□□ -1.38
SF3A3-208ENST00000489537 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.45□□□□□ -1.38
SF3A3-208ENST00000489537 WDR27A2RRH5 827 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 LCHNA4D1U4 455 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 FAM72CH0Y354 149 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 MAFKO60675 156 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 LRG1P02750 347 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 F11P03951 625 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 FGF1P05230 155 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 RB1P06400 928 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 CELA2BP08218 269 aaPredicted RBP6.45□□□□□ -1.38
SF3A3-208ENST00000489537 SERPINF2P08697 491 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 CTSAP10619 480 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 NFKB1P19838 968 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 TACR2P21452 398 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 DRD4P21917 467 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 NFKBIAP25963 317 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 HOXA9P31269 272 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 PPARGP37231 505 aaPredicted RBP6.45□□□□□ -1.38
SF3A3-208ENST00000489537 SLC26A3P40879 764 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 CCNFP41002 786 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 SERPINB8P50452 374 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 PAPOLAP51003 745 aaKnown RBP6.45□□□□□ -1.38
SF3A3-208ENST00000489537 SESN2P58004 480 aaPredicted RBP6.45□□□□□ -1.38
SF3A3-208ENST00000489537 WDR5P61964 334 aaKnown RBP6.45□□□□□ -1.38
SF3A3-208ENST00000489537 SLC20A2Q08357 652 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 SLC12A1Q13621 1099 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 GAS6Q14393 721 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 ZNF235Q14590 738 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 FASTKD3Q14CZ7 662 aaKnown RBP6.45□□□□□ -1.38
SF3A3-208ENST00000489537 CCDC85BQ15834 202 aaPredicted RBP6.45□□□□□ -1.38
SF3A3-208ENST00000489537 TAF1BQ53T94 588 aaPredicted RBP6.45□□□□□ -1.38
SF3A3-208ENST00000489537 INO80DQ53TQ3 878 aaPredicted RBP6.45□□□□□ -1.38
SF3A3-208ENST00000489537 FAM72AQ5TYM5 149 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 FAM72DQ6L9T8 149 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 TMEM214Q6NUQ4 689 aaKnown RBP6.45□□□□□ -1.38
SF3A3-208ENST00000489537 FBXL22Q6P050 247 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 LYPD4Q6UWN0 246 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 PIGWQ7Z7B1 504 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 FAM72BQ86X60 149 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 ZNF354CQ86Y25 554 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 MIB1Q86YT6 1006 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 MFN1Q8IWA4 741 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 TEX26Q8N6G2 289 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 EFHBQ8N7U6 833 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 ANKRD42Q8N9B4 389 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 HJURPQ8NCD3 748 aaPredicted RBP6.45□□□□□ -1.38
SF3A3-208ENST00000489537 RDH11Q8TC12 318 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 DENND1AQ8TEH3 1009 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 PPM1EQ8WY54 764 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 GTPBP3Q969Y2 492 aaKnown RBP6.45□□□□□ -1.38
SF3A3-208ENST00000489537 VPS39Q96JC1 886 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 SEC16BQ96JE7 1060 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 AGAP3Q96P47 875 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 NECAB3Q96P71 396 aaPredicted RBP6.45□□□□□ -1.38
SF3A3-208ENST00000489537 PGLYRP2Q96PD5 576 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 RAD9AQ99638 391 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 RHOBTB2Q9BYZ6 727 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 SLC39A8Q9C0K1 460 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 STN1Q9H668 368 aaKnown RBP6.45□□□□□ -1.38
SF3A3-208ENST00000489537 C10orf88Q9H8K7 445 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 CERS4Q9HA82 394 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 RC3H2Q9HBD1 1191 aaKnown RBP6.45□□□□□ -1.38
SF3A3-208ENST00000489537 CYP4F11Q9HBI6 524 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 HACD3Q9P035 362 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 PRKAG3Q9UGI9 489 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 STOML2Q9UJZ1 356 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 MAGED2Q9UNF1 606 aaPredicted RBP6.45□□□□□ -1.38
SF3A3-208ENST00000489537 TTLL3Q9Y4R7 772 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 YIPF1Q9Y548 306 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 DNMT3AQ9Y6K1 912 aaPredicted RBP6.45□□□□□ -1.38
SF3A3-208ENST00000489537 TSC2P49815 1807 aa6.45□□□□□ -1.38
SF3A3-208ENST00000489537 A0A1W2PQ67 120 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 TCRBV7S3A2A0A539 114 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 TCP11X1B4DZS4 312 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 TRIM49D1C9J1S8 452 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 MSI1O43347 362 aaKnown RBP6.44□□□□□ -1.38
SF3A3-208ENST00000489537 SNX3O60493 162 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 B4GALT3O60512 393 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 PRAMEF11O60813 436 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 SIN3BO75182 1162 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 XYLBO75191 536 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 CRTAMO95727 393 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 CYBBP04839 570 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 POU2F2P09086 479 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 HNRNPA1P09651 372 aaKnown RBP eCLIP6.44□□□□□ -1.38
SF3A3-208ENST00000489537 IGFBP6P24592 240 aaPredicted RBP6.44□□□□□ -1.38
SF3A3-208ENST00000489537 MGAT1P26572 445 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 GCAP28676 217 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 CRABP2P29373 138 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 TYK2P29597 1187 aa6.44□□□□□ -1.38
SF3A3-208ENST00000489537 SKIV2L2P42285 1042 aaKnown RBP6.44□□□□□ -1.38
SF3A3-208ENST00000489537 SERPINH1P50454 418 aaKnown RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms