RNA–Protein interactions for RNA: ENST00000489318.1

C9orf3-220, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-220ENST00000489318 FAM237BA0A1B0GVD1 139 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 TCRBV9S1A1TA0A576 114 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 H3BQF6 201 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 TULP3O75386 442 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 PMPCBO75439 489 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 GJB3O75712 270 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 ALDH1A2O94788 518 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 GSRP00390 522 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 MT-CO1P00395 513 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 AGTP01019 485 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 ASLP04424 464 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 FGF1P05230 155 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 IVLP07476 585 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 PRKCHP24723 683 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 SSTR1P30872 391 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 GBP2P32456 591 aaPredicted RBP11.62□□□□□ -0.55
C9orf3-220ENST00000489318 STX2P32856 288 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 MAPK8P45983 427 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 DGKGP49619 791 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 SESN2P58004 480 aaPredicted RBP11.62□□□□□ -0.55
C9orf3-220ENST00000489318 RHOAP61586 193 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 ITKQ08881 620 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 HTR4Q13639 388 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 EIF4HQ15056 248 aaKnown RBP11.62□□□□□ -0.55
C9orf3-220ENST00000489318 SLC1A5Q15758 541 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 TNFAIP8L3Q5GJ75 292 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 HP1BP3Q5SSJ5 553 aaPredicted RBP11.62□□□□□ -0.55
C9orf3-220ENST00000489318 CEP85LQ5SZL2 805 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 TMEM215Q68D42 235 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 C22orf39Q6P5X5 142 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 NCEH1Q6PIU2 408 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 PARM1Q6UWI2 310 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 TMEM135Q86UB9 458 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 TDRPQ86YL5 185 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 RIBC1Q8N443 379 aaPredicted RBP11.62□□□□□ -0.55
C9orf3-220ENST00000489318 CPA6Q8N4T0 437 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 SH2D3CQ8N5H7 860 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 DNAAF3Q8N9W5 541 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 GSDMBQ8TAX9 411 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 SPOCK2Q92563 424 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 FGF14Q92915 247 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 VOPP1Q96AW1 172 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 PGM2Q96G03 612 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 LRCH3Q96II8 777 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 ZFYVE19Q96K21 471 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 RANBP9Q96S59 729 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 DHRS4Q9BTZ2 278 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 KIFC1Q9BW19 673 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 PLA2G2FQ9BZM2 168 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 EBF3Q9H4W6 596 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 VPS37BQ9H9H4 285 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 TMBIM4Q9HC24 238 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 NOD2Q9HC29 1040 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 PRKAG3Q9UGI9 489 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 RABGEF1Q9UJ41 708 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 SLC25A13Q9UJS0 675 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 SOX13Q9UN79 622 aa11.62□□□□□ -0.55
C9orf3-220ENST00000489318 FCF1Q9Y324 198 aaKnown RBP11.62□□□□□ -0.55
C9orf3-220ENST00000489318 ARIH1Q9Y4X5 557 aaPredicted RBP11.62□□□□□ -0.55
C9orf3-220ENST00000489318 MAGEB16A2A368 324 aa11.61□□□□□ -0.55
C9orf3-220ENST00000489318 OTOL1A6NHN0 477 aaPredicted RBP11.61□□□□□ -0.55
C9orf3-220ENST00000489318 K7ERQ8 282 aa11.61□□□□□ -0.55
C9orf3-220ENST00000489318 SMAD6O43541 496 aaKnown RBP11.61□□□□□ -0.55
C9orf3-220ENST00000489318 ATP9BO43861 1147 aa11.61□□□□□ -0.55
C9orf3-220ENST00000489318 FZD6O60353 706 aa11.61□□□□□ -0.55
C9orf3-220ENST00000489318 USP1O94782 785 aa11.61□□□□□ -0.55
C9orf3-220ENST00000489318 IGFBP4P22692 258 aa11.61□□□□□ -0.55
C9orf3-220ENST00000489318 GCAP28676 217 aa11.61□□□□□ -0.55
C9orf3-220ENST00000489318 CTSOP43234 321 aaPredicted RBP11.61□□□□□ -0.55
C9orf3-220ENST00000489318 NUMBP49757 651 aa11.61□□□□□ -0.55
C9orf3-220ENST00000489318 CDK18Q07002 472 aa11.61□□□□□ -0.55
C9orf3-220ENST00000489318 IFFO1Q0D2I5 559 aa11.61□□□□□ -0.55
C9orf3-220ENST00000489318 SMAD4Q13485 552 aaKnown RBP11.61□□□□□ -0.55
C9orf3-220ENST00000489318 RUNX3Q13761 415 aa11.61□□□□□ -0.55
C9orf3-220ENST00000489318 CRYMQ14894 314 aa11.61□□□□□ -0.55
C9orf3-220ENST00000489318 GEN1Q17RS7 908 aa11.61□□□□□ -0.55
C9orf3-220ENST00000489318 KLHL38Q2WGJ6 581 aa11.61□□□□□ -0.55
C9orf3-220ENST00000489318 PCID2Q5JVF3 399 aa11.61□□□□□ -0.55
C9orf3-220ENST00000489318 SPANXN3Q5MJ09 141 aa11.61□□□□□ -0.55
C9orf3-220ENST00000489318 MBLAC2Q68D91 279 aa11.61□□□□□ -0.55
C9orf3-220ENST00000489318 C3orf62Q6ZUJ4 267 aa11.61□□□□□ -0.55
C9orf3-220ENST00000489318 PALM2Q8IXS6 379 aa11.61□□□□□ -0.55
C9orf3-220ENST00000489318 PLPP6Q8IY26 295 aa11.61□□□□□ -0.55
C9orf3-220ENST00000489318 PCDH20Q8N6Y1 951 aaKnown RBP11.61□□□□□ -0.55
C9orf3-220ENST00000489318 KDM1BQ8NB78 822 aa11.61□□□□□ -0.55
C9orf3-220ENST00000489318 OR2AP1Q8NGE2 309 aa11.61□□□□□ -0.55
C9orf3-220ENST00000489318 PEX13Q92968 403 aa11.61□□□□□ -0.55
C9orf3-220ENST00000489318 CHFRQ96EP1 664 aa11.61□□□□□ -0.55
C9orf3-220ENST00000489318 MYO19Q96H55 970 aa11.61□□□□□ -0.55
C9orf3-220ENST00000489318 EXOC2Q96KP1 924 aa11.61□□□□□ -0.55
C9orf3-220ENST00000489318 MRGPRX3Q96LB0 322 aa11.61□□□□□ -0.55
C9orf3-220ENST00000489318 KXD1Q9BQD3 176 aa11.61□□□□□ -0.55
C9orf3-220ENST00000489318 APOL2Q9BQE5 337 aa11.61□□□□□ -0.55
C9orf3-220ENST00000489318 SCUBE2Q9NQ36 999 aa11.61□□□□□ -0.55
C9orf3-220ENST00000489318 MOCS1Q9NZB8 636 aa11.61□□□□□ -0.55
C9orf3-220ENST00000489318 LGALS13Q9UHV8 139 aa11.61□□□□□ -0.55
C9orf3-220ENST00000489318 ZCWPW2A0A1B0GU75 182 aa11.6□□□□□ -0.55
C9orf3-220ENST00000489318 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.6□□□□□ -0.55
C9orf3-220ENST00000489318 EXOC1LA0A1B0GW35 172 aa11.6□□□□□ -0.55
C9orf3-220ENST00000489318 TTC24A2A3L6 582 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms