RNA–Protein interactions for RNA: ENST00000489160.1

CCL20-204, Transcript of C-C motif chemokine ligand 20, humanhuman

TSL 3

Gene CCL20, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-204ENST00000489160 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.26□□□□□ -1.57
CCL20-204ENST00000489160 ZNF804BA4D1E1 1349 aa5.25□□□□□ -1.57
CCL20-204ENST00000489160 A0A096LPK6 155 aa5.25□□□□□ -1.57
CCL20-204ENST00000489160 ZNF814B7Z6K7 855 aa5.25□□□□□ -1.57
CCL20-204ENST00000489160 TACC1O75410 805 aa5.25□□□□□ -1.57
CCL20-204ENST00000489160 TOP3BO95985 862 aaKnown RBP5.25□□□□□ -1.57
CCL20-204ENST00000489160 CLEC3BP05452 202 aa5.25□□□□□ -1.57
CCL20-204ENST00000489160 MYZAPP0CAP1 466 aa5.25□□□□□ -1.57
CCL20-204ENST00000489160 CYP19A1P11511 503 aaPredicted RBP5.25□□□□□ -1.57
CCL20-204ENST00000489160 SLC2A4P14672 509 aa5.25□□□□□ -1.57
CCL20-204ENST00000489160 PSMA4P25789 261 aaKnown RBP5.25□□□□□ -1.57
CCL20-204ENST00000489160 POU1F1P28069 291 aa5.25□□□□□ -1.57
CCL20-204ENST00000489160 TNFSF8P32971 234 aa5.25□□□□□ -1.57
CCL20-204ENST00000489160 CENPAP49450 140 aa5.25□□□□□ -1.57
CCL20-204ENST00000489160 CTCFP49711 727 aaPredicted RBP5.25□□□□□ -1.57
CCL20-204ENST00000489160 DCAF7P61962 342 aa5.25□□□□□ -1.57
CCL20-204ENST00000489160 SLC18A2Q05940 514 aa5.25□□□□□ -1.57
CCL20-204ENST00000489160 TAF11Q15544 211 aa5.25□□□□□ -1.57
CCL20-204ENST00000489160 INPP5JQ15735 1006 aaPredicted RBP5.25□□□□□ -1.57
CCL20-204ENST00000489160 GPATCH4Q5T3I0 446 aaKnown RBP5.25□□□□□ -1.57
CCL20-204ENST00000489160 SERTAD4-AS1Q5TG53 156 aa5.25□□□□□ -1.57
CCL20-204ENST00000489160 ASPHD1Q5U4P2 390 aa5.25□□□□□ -1.57
CCL20-204ENST00000489160 HAUS3Q68CZ6 603 aa5.25□□□□□ -1.57
CCL20-204ENST00000489160 BRINP3Q76B58 766 aa5.25□□□□□ -1.57
CCL20-204ENST00000489160 CPLX4Q7Z7G2 160 aa5.25□□□□□ -1.57
CCL20-204ENST00000489160 C16orf52Q8NHV5 167 aa5.25□□□□□ -1.57
CCL20-204ENST00000489160 MPLKIPQ8TAP9 179 aa5.25□□□□□ -1.57
CCL20-204ENST00000489160 ETNPPLQ8TBG4 499 aa5.25□□□□□ -1.57
CCL20-204ENST00000489160 ATOH1Q92858 354 aaPredicted RBP5.25□□□□□ -1.57
CCL20-204ENST00000489160 MSI2Q96DH6 328 aaKnown RBP5.25□□□□□ -1.57
CCL20-204ENST00000489160 ZFYVE19Q96K21 471 aa5.25□□□□□ -1.57
CCL20-204ENST00000489160 CENPOQ9BU64 300 aa5.25□□□□□ -1.57
CCL20-204ENST00000489160 AP1M1Q9BXS5 423 aa5.25□□□□□ -1.57
CCL20-204ENST00000489160 B3GNT4Q9C0J1 378 aa5.25□□□□□ -1.57
CCL20-204ENST00000489160 KRT84Q9NSB2 600 aa5.25□□□□□ -1.57
CCL20-204ENST00000489160 C20orf141Q9NUB4 165 aa5.25□□□□□ -1.57
CCL20-204ENST00000489160 TUBA8Q9NY65 449 aaPredicted RBP5.25□□□□□ -1.57
CCL20-204ENST00000489160 PLEKHB1Q9UF11 243 aaPredicted RBP5.25□□□□□ -1.57
CCL20-204ENST00000489160 BTBD3Q9Y2F9 522 aa5.25□□□□□ -1.57
CCL20-204ENST00000489160 KAT6BQ8WYB5 2073 aa5.25□□□□□ -1.57
CCL20-204ENST00000489160 PGPEP1LA6NFU8 196 aa5.24□□□□□ -1.57
CCL20-204ENST00000489160 CBY3A6NI87 242 aa5.24□□□□□ -1.57
CCL20-204ENST00000489160 A6NNC1 897 aa5.24□□□□□ -1.57
CCL20-204ENST00000489160 B4DLN1 442 aa5.24□□□□□ -1.57
CCL20-204ENST00000489160 EBAG9O00559 213 aa5.24□□□□□ -1.57
CCL20-204ENST00000489160 SLC25A17O43808 307 aa5.24□□□□□ -1.57
CCL20-204ENST00000489160 USO1O60763 962 aaKnown RBP5.24□□□□□ -1.57
CCL20-204ENST00000489160 FGBP02675 491 aa5.24□□□□□ -1.57
CCL20-204ENST00000489160 MMP3P08254 477 aa5.24□□□□□ -1.57
CCL20-204ENST00000489160 CHRNB1P11230 501 aa5.24□□□□□ -1.57
CCL20-204ENST00000489160 PTPN2P17706 415 aa5.24□□□□□ -1.57
CCL20-204ENST00000489160 PTGER1P34995 402 aa5.24□□□□□ -1.57
CCL20-204ENST00000489160 RFC1P35251 1148 aaPredicted RBP5.24□□□□□ -1.57
CCL20-204ENST00000489160 CPOXP36551 454 aa5.24□□□□□ -1.57
CCL20-204ENST00000489160 MMP13P45452 471 aa5.24□□□□□ -1.57
CCL20-204ENST00000489160 SRSF1Q07955 248 aaKnown RBP eCLIP5.24□□□□□ -1.57
CCL20-204ENST00000489160 TBCEQ15813 527 aaPredicted RBP5.24□□□□□ -1.57
CCL20-204ENST00000489160 ARMC3Q5W041 872 aa5.24□□□□□ -1.57
CCL20-204ENST00000489160 SHC4Q6S5L8 630 aa5.24□□□□□ -1.57
CCL20-204ENST00000489160 CCDC129Q6ZRS4 1044 aa5.24□□□□□ -1.57
CCL20-204ENST00000489160 FAM83HQ6ZRV2 1179 aaPredicted RBP5.24□□□□□ -1.57
CCL20-204ENST00000489160 NEK10Q6ZWH5 1172 aa5.24□□□□□ -1.57
CCL20-204ENST00000489160 GPAT4Q86UL3 456 aa5.24□□□□□ -1.57
CCL20-204ENST00000489160 CAMK1DQ8IU85 385 aa5.24□□□□□ -1.57
CCL20-204ENST00000489160 FAM217AQ8IXS0 508 aa5.24□□□□□ -1.57
CCL20-204ENST00000489160 KDM1BQ8NB78 822 aa5.24□□□□□ -1.57
CCL20-204ENST00000489160 CCDC68Q9H2F9 335 aa5.24□□□□□ -1.57
CCL20-204ENST00000489160 RANBP17Q9H2T7 1088 aaKnown RBP5.24□□□□□ -1.57
CCL20-204ENST00000489160 PRKRIP1Q9H875 184 aaPredicted RBP5.24□□□□□ -1.57
CCL20-204ENST00000489160 WDR6Q9NNW5 1121 aaKnown RBP5.24□□□□□ -1.57
CCL20-204ENST00000489160 TRNAU1APQ9NX07 287 aaKnown RBP5.24□□□□□ -1.57
CCL20-204ENST00000489160 NSMCE4AQ9NXX6 385 aa5.24□□□□□ -1.57
CCL20-204ENST00000489160 PCDHA12Q9UN75 941 aa5.24□□□□□ -1.57
CCL20-204ENST00000489160 ADGRF5Q8IZF2 1346 aa5.23□□□□□ -1.57
CCL20-204ENST00000489160 A0A1W2PPC1 479 aa5.23□□□□□ -1.57
CCL20-204ENST00000489160 FAM170AA1A519 330 aa5.23□□□□□ -1.57
CCL20-204ENST00000489160 GAGE12JA6NER3 117 aa5.23□□□□□ -1.57
CCL20-204ENST00000489160 NPIPB15A6NHN6 443 aaPredicted RBP5.23□□□□□ -1.57
CCL20-204ENST00000489160 TTC36A6NLP5 189 aa5.23□□□□□ -1.57
CCL20-204ENST00000489160 HSPB6O14558 160 aa5.23□□□□□ -1.57
CCL20-204ENST00000489160 LDLRAD4O15165 306 aa5.23□□□□□ -1.57
CCL20-204ENST00000489160 ATG13O75143 517 aa5.23□□□□□ -1.57
CCL20-204ENST00000489160 SEC14L2O76054 403 aa5.23□□□□□ -1.57
CCL20-204ENST00000489160 HEXAP06865 529 aa5.23□□□□□ -1.57
CCL20-204ENST00000489160 IRF1P10914 325 aa5.23□□□□□ -1.57
CCL20-204ENST00000489160 ENO3P13929 434 aaPredicted RBP5.23□□□□□ -1.57
CCL20-204ENST00000489160 ZNF8P17098 575 aaPredicted RBP5.23□□□□□ -1.57
CCL20-204ENST00000489160 CTPS1P17812 591 aa5.23□□□□□ -1.57
CCL20-204ENST00000489160 POLD2P49005 469 aa5.23□□□□□ -1.57
CCL20-204ENST00000489160 ARF3P61204 181 aaPredicted RBP5.23□□□□□ -1.57
CCL20-204ENST00000489160 RPL7AP62424 266 aaKnown RBP5.23□□□□□ -1.57
CCL20-204ENST00000489160 ARF1P84077 181 aaKnown RBP5.23□□□□□ -1.57
CCL20-204ENST00000489160 DCTN2Q13561 401 aaKnown RBP5.23□□□□□ -1.57
CCL20-204ENST00000489160 MYBPC2Q14324 1141 aa5.23□□□□□ -1.57
CCL20-204ENST00000489160 VEPH1Q14D04 833 aa5.23□□□□□ -1.57
CCL20-204ENST00000489160 ATG9BQ674R7 924 aa5.23□□□□□ -1.57
CCL20-204ENST00000489160 ARFGAP1Q8N6T3 406 aa5.23□□□□□ -1.57
CCL20-204ENST00000489160 HORMAD2Q8N7B1 307 aa5.23□□□□□ -1.57
CCL20-204ENST00000489160 NANOGP1Q8N7R0 232 aa5.23□□□□□ -1.57
CCL20-204ENST00000489160 ANKRD52Q8NB46 1076 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms