RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 ATP9BO43861 1147 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 RNF40O75150 1001 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 GJB3O75712 270 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 TCEA3O75764 348 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 CD160O95971 181 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 MT-CO1P00395 513 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 ASLP04424 464 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 FGF1P05230 155 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 ATP5BP06576 529 aaKnown RBP10.13□□□□□ -0.79
USP11-211ENST00000489111 TPH1P17752 444 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 OAS2P29728 719 aaKnown RBP10.13□□□□□ -0.79
USP11-211ENST00000489111 NNMTP40261 264 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 CTSOP43234 321 aaPredicted RBP10.13□□□□□ -0.79
USP11-211ENST00000489111 RGRP47804 291 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 KDSRQ06136 332 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 NSUN2Q08J23 767 aaKnown RBP eCLIP10.13□□□□□ -0.79
USP11-211ENST00000489111 POU6F1Q14863 301 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 CRYMQ14894 314 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 SLC1A5Q15758 541 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 LONRF1Q17RB8 773 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 SPANXN3Q5MJ09 141 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 CERCAMQ5T4B2 595 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 ATXN7L2Q5T6C5 722 aaPredicted RBP10.13□□□□□ -0.79
USP11-211ENST00000489111 STEAP4Q687X5 459 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 ASTLQ6HA08 431 aaPredicted RBP10.13□□□□□ -0.79
USP11-211ENST00000489111 C22orf39Q6P5X5 142 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 PARM1Q6UWI2 310 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 RANBP10Q6VN20 620 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 UNC5AQ6ZN44 842 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 SRLQ86TD4 932 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 PTCD2Q8WV60 388 aaKnown RBP10.13□□□□□ -0.79
USP11-211ENST00000489111 ZNF669Q96BR6 464 aaPredicted RBP10.13□□□□□ -0.79
USP11-211ENST00000489111 FAM83CQ9BQN1 747 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 TRMT61BQ9BVS5 477 aaKnown RBP10.13□□□□□ -0.79
USP11-211ENST00000489111 ADGRE3Q9BY15 652 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 CEP44Q9C0F1 390 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 ECT2Q9H8V3 914 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 OGFRQ9NZT2 677 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 BCCIPQ9P287 314 aaKnown RBP eCLIP10.13□□□□□ -0.79
USP11-211ENST00000489111 DEC1Q9P2X7 70 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 EPS15L1Q9UBC2 864 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 SLC8A2Q9UPR5 921 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 HS3ST2Q9Y278 367 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 ARIH1Q9Y4X5 557 aaPredicted RBP10.13□□□□□ -0.79
USP11-211ENST00000489111 IKBKGQ9Y6K9 419 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 RPS6KL1Q9Y6S9 549 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 ANAPC1Q9H1A4 1944 aa10.13□□□□□ -0.79
USP11-211ENST00000489111 MTCL1Q9Y4B5 1905 aaKnown RBP10.12□□□□□ -0.79
USP11-211ENST00000489111 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.12□□□□□ -0.79
USP11-211ENST00000489111 FAM237BA0A1B0GVD1 139 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.12□□□□□ -0.79
USP11-211ENST00000489111 HMGB1P1B2RPK0 211 aaPredicted RBP10.12□□□□□ -0.79
USP11-211ENST00000489111 POC1B-GALNT4F8VUJ3 575 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 SMAD6O43541 496 aaKnown RBP10.12□□□□□ -0.79
USP11-211ENST00000489111 CDH16O75309 829 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 TULP3O75386 442 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 NDST3O95803 873 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 GSRP00390 522 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 EPOP01588 193 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 SRCP12931 536 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 CR2P20023 1033 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 KCNA5P22460 613 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 SP100P23497 879 aaPredicted RBP10.12□□□□□ -0.79
USP11-211ENST00000489111 ATP5DP30049 168 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 GDI1P31150 447 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 CHRNA4P43681 627 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 RECQLP46063 649 aaPredicted RBP10.12□□□□□ -0.79
USP11-211ENST00000489111 STK19P49842 368 aaPredicted RBP10.12□□□□□ -0.79
USP11-211ENST00000489111 ST8SIA6P61647 398 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 SNRPD1P62314 119 aaKnown RBP10.12□□□□□ -0.79
USP11-211ENST00000489111 LAMB3Q13751 1172 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 RUNX3Q13761 415 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 ACCSLQ4AC99 568 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 PREPLQ4J6C6 727 aaPredicted RBP10.12□□□□□ -0.79
USP11-211ENST00000489111 PCID2Q5JVF3 399 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 SIRPB2Q5JXA9 342 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 AGBL2Q5U5Z8 902 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 PRPF38BQ5VTL8 546 aaKnown RBP10.12□□□□□ -0.79
USP11-211ENST00000489111 ARMC3Q5W041 872 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 DENND5AQ6IQ26 1287 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 ADIPOR2Q86V24 386 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 C12orf40Q86WS4 652 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 CTAGE3PQ8IX95 158 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 RIBC1Q8N443 379 aaPredicted RBP10.12□□□□□ -0.79
USP11-211ENST00000489111 SH2D3CQ8N5H7 860 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 PCDH20Q8N6Y1 951 aaKnown RBP10.12□□□□□ -0.79
USP11-211ENST00000489111 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.12□□□□□ -0.79
USP11-211ENST00000489111 PDCD6IPQ8WUM4 868 aaKnown RBP10.12□□□□□ -0.79
USP11-211ENST00000489111 SUSD6Q92537 303 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 CDKL2Q92772 493 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 TTC17Q96AE7 1141 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 ISG20Q96AZ6 181 aaKnown RBP10.12□□□□□ -0.79
USP11-211ENST00000489111 RMDN1Q96DB5 314 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 LRCH3Q96II8 777 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 RPL10LQ96L21 214 aaKnown RBP10.12□□□□□ -0.79
USP11-211ENST00000489111 ATP6V1G3Q96LB4 118 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 TDRD1Q9BXT4 1180 aaKnown RBP10.12□□□□□ -0.79
USP11-211ENST00000489111 TNKS2Q9H2K2 1166 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 ATP13A3Q9H7F0 1226 aa10.12□□□□□ -0.79
USP11-211ENST00000489111 ARNT2Q9HBZ2 717 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms