RNA–Protein interactions for RNA: ENST00000488918.2

ARHGEF39-204, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 5

Gene ARHGEF39, Length 347 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-204ENST00000488918 USP34Q70CQ2 3546 aa11.36□□□□□ -0.59
ARHGEF39-204ENST00000488918 PLXND1Q9Y4D7 1925 aa11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 UPK3BL1B0FP48 263 aa11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 UPK3BL2E5RIL1 263 aa11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 J3KR12 359 aa11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 FPGTO14772 594 aa11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 AP1G1O43747 822 aa11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 ZNF883P0CG24 379 aa11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 PRLRP16471 622 aa11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 AMPD1P23109 780 aa11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 IL1R2P27930 398 aa11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 MAN1A1P33908 653 aa11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 SLC1A1P43005 524 aa11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 GRK6P43250 576 aa11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 MAGEA1P43355 309 aa11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 SCNN1BP51168 640 aa11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 ZNF75DP51815 510 aa11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 DPYSQ14117 519 aa11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 LBRQ14739 615 aaKnown RBP11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 MARC1Q5VT66 337 aa11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 TIGD7Q6NT04 549 aaPredicted RBP11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 BRAT1Q6PJG6 821 aa11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 LAYNQ6UX15 382 aa11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 PARS2Q7L3T8 475 aaKnown RBP11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 PTAR1Q7Z6K3 402 aaPredicted RBP11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 NDUFAF2Q8N183 169 aa11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 CCNYQ8ND76 341 aa11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 MRFAP1L1Q96HT8 127 aa11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 ZNF641Q96N77 438 aaPredicted RBP11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 CHP1Q99653 195 aa11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 PACSIN1Q9BY11 444 aa11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 SLC17A9Q9BYT1 436 aa11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 CPEB1Q9BZB8 566 aaKnown RBP11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 NOL6Q9H6R4 1146 aaKnown RBP11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 LRRC19Q9H756 370 aa11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 PCDH18Q9HCL0 1135 aa11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 SCUBE2Q9NQ36 999 aa11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 APOBEC2Q9Y235 224 aaKnown RBP11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 TTLL3Q9Y4R7 772 aa11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 MUC22E2RYF6 1773 aaPredicted RBP11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 VPS13AQ96RL7 3174 aa11.35□□□□□ -0.59
ARHGEF39-204ENST00000488918 GVINP1Q7Z2Y8 2422 aa11.34□□□□□ -0.59
ARHGEF39-204ENST00000488918 LRRD1A4D1F6 860 aa11.34□□□□□ -0.59
ARHGEF39-204ENST00000488918 A6NNZ2 444 aa11.34□□□□□ -0.59
ARHGEF39-204ENST00000488918 LATO43561 262 aa11.34□□□□□ -0.59
ARHGEF39-204ENST00000488918 SH3BP5O60239 455 aa11.34□□□□□ -0.59
ARHGEF39-204ENST00000488918 ZNF821O75541 412 aaPredicted RBP11.34□□□□□ -0.59
ARHGEF39-204ENST00000488918 TM7SF2O76062 418 aa11.34□□□□□ -0.59
ARHGEF39-204ENST00000488918 MX2P20592 715 aa11.34□□□□□ -0.59
ARHGEF39-204ENST00000488918 CA4P22748 312 aa11.34□□□□□ -0.59
ARHGEF39-204ENST00000488918 GKP32189 559 aa11.34□□□□□ -0.59
ARHGEF39-204ENST00000488918 AP1S1P61966 158 aa11.34□□□□□ -0.59
ARHGEF39-204ENST00000488918 TRIP6Q15654 476 aaKnown RBP11.34□□□□□ -0.59
ARHGEF39-204ENST00000488918 SRLQ86TD4 932 aa11.34□□□□□ -0.59
ARHGEF39-204ENST00000488918 DCP2Q8IU60 420 aaKnown RBP11.34□□□□□ -0.59
ARHGEF39-204ENST00000488918 TMTC1Q8IUR5 882 aa11.34□□□□□ -0.59
ARHGEF39-204ENST00000488918 NETO2Q8NC67 525 aa11.34□□□□□ -0.59
ARHGEF39-204ENST00000488918 HCAR2Q8TDS4 363 aa11.34□□□□□ -0.59
ARHGEF39-204ENST00000488918 PDCD6IPQ8WUM4 868 aaKnown RBP11.34□□□□□ -0.59
ARHGEF39-204ENST00000488918 ELF4Q99607 663 aaPredicted RBP11.34□□□□□ -0.59
ARHGEF39-204ENST00000488918 ZNF670Q9BS34 389 aa11.34□□□□□ -0.59
ARHGEF39-204ENST00000488918 RBSNQ9H1K0 784 aa11.34□□□□□ -0.59
ARHGEF39-204ENST00000488918 SUV39H2Q9H5I1 410 aa11.34□□□□□ -0.59
ARHGEF39-204ENST00000488918 DDX56Q9NY93 547 aaKnown RBP11.34□□□□□ -0.59
ARHGEF39-204ENST00000488918 DKK3Q9UBP4 350 aa11.34□□□□□ -0.59
ARHGEF39-204ENST00000488918 ANGPTL2Q9UKU9 493 aa11.34□□□□□ -0.59
ARHGEF39-204ENST00000488918 MFHAS1Q9Y4C4 1052 aa11.34□□□□□ -0.59
ARHGEF39-204ENST00000488918 PCDHGB2Q9Y5G2 931 aa11.34□□□□□ -0.59
ARHGEF39-204ENST00000488918 FADS3Q9Y5Q0 445 aa11.34□□□□□ -0.59
ARHGEF39-204ENST00000488918 A0A1W2PQ67 120 aa11.33□□□□□ -0.6
ARHGEF39-204ENST00000488918 MED19A0JLT2 244 aaPredicted RBP11.33□□□□□ -0.6
ARHGEF39-204ENST00000488918 GOLGA8CPA6NN73 597 aa11.33□□□□□ -0.6
ARHGEF39-204ENST00000488918 H3BM21 787 aa11.33□□□□□ -0.6
ARHGEF39-204ENST00000488918 KCNK3O14649 394 aa11.33□□□□□ -0.6
ARHGEF39-204ENST00000488918 TM4SF5O14894 197 aa11.33□□□□□ -0.6
ARHGEF39-204ENST00000488918 LZTS3O60299 673 aaPredicted RBP11.33□□□□□ -0.6
ARHGEF39-204ENST00000488918 TRIM16O95361 564 aa11.33□□□□□ -0.6
ARHGEF39-204ENST00000488918 CD160O95971 181 aa11.33□□□□□ -0.6
ARHGEF39-204ENST00000488918 PAK4O96013 591 aaPredicted RBP11.33□□□□□ -0.6
ARHGEF39-204ENST00000488918 KRT1P04264 644 aa11.33□□□□□ -0.6
ARHGEF39-204ENST00000488918 PTMAP06454 111 aaKnown RBP11.33□□□□□ -0.6
ARHGEF39-204ENST00000488918 ADRB1P08588 477 aa11.33□□□□□ -0.6
ARHGEF39-204ENST00000488918 THEGLP0DJG4 465 aa11.33□□□□□ -0.6
ARHGEF39-204ENST00000488918 ZFXP17010 805 aaPredicted RBP11.33□□□□□ -0.6
ARHGEF39-204ENST00000488918 CETN2P41208 172 aa11.33□□□□□ -0.6
ARHGEF39-204ENST00000488918 CTSKP43235 329 aa11.33□□□□□ -0.6
ARHGEF39-204ENST00000488918 TNNT3P45378 269 aaPredicted RBP11.33□□□□□ -0.6
ARHGEF39-204ENST00000488918 MMP13P45452 471 aa11.33□□□□□ -0.6
ARHGEF39-204ENST00000488918 CSNK1DP48730 415 aa11.33□□□□□ -0.6
ARHGEF39-204ENST00000488918 THOP1P52888 689 aa11.33□□□□□ -0.6
ARHGEF39-204ENST00000488918 FAM193AP78312 1265 aa11.33□□□□□ -0.6
ARHGEF39-204ENST00000488918 IL9RQ01113 521 aa11.33□□□□□ -0.6
ARHGEF39-204ENST00000488918 SLC25A11Q02978 314 aaKnown RBP11.33□□□□□ -0.6
ARHGEF39-204ENST00000488918 NSUN2Q08J23 767 aaKnown RBP eCLIP11.33□□□□□ -0.6
ARHGEF39-204ENST00000488918 FOXC1Q12948 553 aa11.33□□□□□ -0.6
ARHGEF39-204ENST00000488918 PTK2BQ14289 1009 aa11.33□□□□□ -0.6
ARHGEF39-204ENST00000488918 CYTH1Q15438 398 aa11.33□□□□□ -0.6
ARHGEF39-204ENST00000488918 IFI16Q16666 785 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms