RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 SCN4AP35499 1836 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 A0A1B0GTW7 788 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 A0A1B0GVG6 124 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 MAGEB16A2A368 324 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 LRRC14BA6NHZ5 514 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 TMEM114B3SHH9 223 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 PPP6CO00743 305 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 MTSS1O43312 755 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 CAPN15O75808 1086 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 F9P00740 461 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 FAM163BP0C2L3 166 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 FGFR3P22607 806 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 THPOP40225 353 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 RPL14P50914 215 aaKnown RBP12.82□□□□□ -0.36
CLIC4-202ENST00000488683 PAPOLAP51003 745 aaKnown RBP12.82□□□□□ -0.36
CLIC4-202ENST00000488683 RALGDSQ12967 914 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 CEACAM7Q14002 265 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 NAPEPLDQ6IQ20 393 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 ZYG11AQ6WRX3 759 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 PDSS2Q86YH6 399 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 RYBPQ8N488 228 aaPredicted RBP12.82□□□□□ -0.36
CLIC4-202ENST00000488683 OR9I1Q8NGQ6 314 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 PABPC5Q96DU9 382 aaKnown RBP12.82□□□□□ -0.36
CLIC4-202ENST00000488683 IFT43Q96FT9 208 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 VAT1Q99536 393 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 FSD1LQ9BXM9 530 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 ARHGAP39Q9C0H5 1083 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 SEMA6AQ9H2E6 1030 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 RHOJQ9H4E5 214 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 FAM96AQ9H5X1 160 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 ABI2Q9NYB9 513 aaPredicted RBP12.82□□□□□ -0.36
CLIC4-202ENST00000488683 ARHGAP26Q9UNA1 814 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 TDRD15B5MCY1 1934 aaKnown RBP12.82□□□□□ -0.36
CLIC4-202ENST00000488683 KCNU1A8MYU2 1149 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 CACNG3O60359 315 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 DNAJA2O60884 412 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 FKBP6O75344 327 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 KCNC1P48547 511 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 SLC5A3P53794 718 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 CD300LGQ6UXG3 332 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 SDCCAG8Q86SQ7 713 aaPredicted RBP12.82□□□□□ -0.36
CLIC4-202ENST00000488683 ANKRD49Q8WVL7 239 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 DRC3Q9H069 523 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 FBRSL1Q9HCM7 1045 aaKnown RBP12.82□□□□□ -0.36
CLIC4-202ENST00000488683 NT5MQ9NPB1 228 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 DNAJB4Q9UDY4 337 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 CRYL1Q9Y2S2 319 aa12.82□□□□□ -0.36
CLIC4-202ENST00000488683 UNC80Q8N2C7 3258 aa12.81□□□□□ -0.36
CLIC4-202ENST00000488683 A0A1W2PQH9 124 aa12.81□□□□□ -0.36
CLIC4-202ENST00000488683 TARM1B6A8C7 271 aa12.81□□□□□ -0.36
CLIC4-202ENST00000488683 IGLV3-25P01717 112 aa12.81□□□□□ -0.36
CLIC4-202ENST00000488683 HAPLN1P10915 354 aaPredicted RBP12.81□□□□□ -0.36
CLIC4-202ENST00000488683 ARCN1P48444 511 aaKnown RBP12.81□□□□□ -0.36
CLIC4-202ENST00000488683 YBX1P67809 324 aaKnown RBP12.81□□□□□ -0.36
CLIC4-202ENST00000488683 EIF4EBP2Q13542 120 aaPredicted RBP12.81□□□□□ -0.36
CLIC4-202ENST00000488683 LIPMQ5VYY2 423 aa12.81□□□□□ -0.36
CLIC4-202ENST00000488683 FAM171BQ6P995 826 aa12.81□□□□□ -0.36
CLIC4-202ENST00000488683 BHLHE22Q8NFJ8 381 aaPredicted RBP12.81□□□□□ -0.36
CLIC4-202ENST00000488683 MYEOVQ96EZ4 313 aa12.81□□□□□ -0.36
CLIC4-202ENST00000488683 MRGPRX2Q96LB1 330 aa12.81□□□□□ -0.36
CLIC4-202ENST00000488683 GPR78Q96P69 363 aa12.81□□□□□ -0.36
CLIC4-202ENST00000488683 CYP2S1Q96SQ9 504 aa12.81□□□□□ -0.36
CLIC4-202ENST00000488683 COPG1Q9Y678 874 aaKnown RBP12.81□□□□□ -0.36
CLIC4-202ENST00000488683 MAGEA13PA6NCF6 341 aa12.81□□□□□ -0.36
CLIC4-202ENST00000488683 YWHAQP27348 245 aa12.81□□□□□ -0.36
CLIC4-202ENST00000488683 MTTPP55157 894 aa12.81□□□□□ -0.36
CLIC4-202ENST00000488683 ARPP19P56211 112 aa12.81□□□□□ -0.36
CLIC4-202ENST00000488683 C1QTNF8P60827 252 aa12.81□□□□□ -0.36
CLIC4-202ENST00000488683 USP46P62068 366 aa12.81□□□□□ -0.36
CLIC4-202ENST00000488683 DSC2Q02487 901 aa12.81□□□□□ -0.36
CLIC4-202ENST00000488683 SLC10A7Q0GE19 358 aa12.81□□□□□ -0.36
CLIC4-202ENST00000488683 ZRSR2Q15696 482 aaKnown RBP12.81□□□□□ -0.36
CLIC4-202ENST00000488683 PKN3Q6P5Z2 889 aa12.81□□□□□ -0.36
CLIC4-202ENST00000488683 AAGABQ6PD74 315 aa12.81□□□□□ -0.36
CLIC4-202ENST00000488683 SCD5Q86SK9 330 aa12.81□□□□□ -0.36
CLIC4-202ENST00000488683 MIB1Q86YT6 1006 aa12.81□□□□□ -0.36
CLIC4-202ENST00000488683 KLHDC8BQ8IXV7 354 aa12.81□□□□□ -0.36
CLIC4-202ENST00000488683 LILRA2Q8N149 483 aa12.81□□□□□ -0.36
CLIC4-202ENST00000488683 PKMYT1Q99640 499 aa12.81□□□□□ -0.36
CLIC4-202ENST00000488683 KATNAL1Q9BW62 490 aa12.81□□□□□ -0.36
CLIC4-202ENST00000488683 GLOD4Q9HC38 313 aa12.81□□□□□ -0.36
CLIC4-202ENST00000488683 RRN3Q9NYV6 651 aa12.81□□□□□ -0.36
CLIC4-202ENST00000488683 PCDH10Q9P2E7 1040 aa12.81□□□□□ -0.36
CLIC4-202ENST00000488683 PADI3Q9ULW8 664 aa12.81□□□□□ -0.36
CLIC4-202ENST00000488683 FNDC3AQ9Y2H6 1198 aaKnown RBP12.81□□□□□ -0.36
CLIC4-202ENST00000488683 ACOT9Q9Y305 439 aa12.81□□□□□ -0.36
CLIC4-202ENST00000488683 TRPV2Q9Y5S1 764 aa12.81□□□□□ -0.36
CLIC4-202ENST00000488683 SCN10AQ9Y5Y9 1956 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 MIA3Q5JRA6 1907 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 HDAC3O15379 428 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 CSPG5O95196 566 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 PCSK1P29120 753 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 CD86P42081 329 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 ARSDP51689 593 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 CDH13P55290 713 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 PRPSAP1Q14558 356 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 PTPRRQ15256 657 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 SLC39A12Q504Y0 691 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 ALFQ53S48 1182 aa12.8□□□□□ -0.36
CLIC4-202ENST00000488683 BTBD8Q5XKL5 378 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms