RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 MUSKO15146 869 aa16.16■□□□□ 0.18
CTDSP1-209ENST00000488627 PALMO75781 387 aa16.16■□□□□ 0.18
CTDSP1-209ENST00000488627 IGSF6O95976 241 aa16.16■□□□□ 0.18
CTDSP1-209ENST00000488627 ZNF883P0CG24 379 aa16.16■□□□□ 0.18
CTDSP1-209ENST00000488627 CD38P28907 300 aa16.16■□□□□ 0.18
CTDSP1-209ENST00000488627 ARHGAP25P42331 645 aa16.16■□□□□ 0.18
CTDSP1-209ENST00000488627 CSNK1DP48730 415 aa16.16■□□□□ 0.18
CTDSP1-209ENST00000488627 FGL2Q14314 439 aa16.16■□□□□ 0.18
CTDSP1-209ENST00000488627 MESDQ14696 234 aa16.16■□□□□ 0.18
CTDSP1-209ENST00000488627 SEL1L3Q68CR1 1132 aa16.16■□□□□ 0.18
CTDSP1-209ENST00000488627 NAPEPLDQ6IQ20 393 aa16.16■□□□□ 0.18
CTDSP1-209ENST00000488627 PSAPL1Q6NUJ1 521 aa16.16■□□□□ 0.18
CTDSP1-209ENST00000488627 FBXL19Q6PCT2 694 aa16.16■□□□□ 0.18
CTDSP1-209ENST00000488627 RHOT2Q8IXI1 618 aa16.16■□□□□ 0.18
CTDSP1-209ENST00000488627 TMEM145Q8NBT3 493 aa16.16■□□□□ 0.18
CTDSP1-209ENST00000488627 TSEN2Q8NCE0 465 aaKnown RBP16.16■□□□□ 0.18
CTDSP1-209ENST00000488627 DEFB124Q8NES8 71 aa16.16■□□□□ 0.18
CTDSP1-209ENST00000488627 PCDH19Q8TAB3 1148 aa16.16■□□□□ 0.18
CTDSP1-209ENST00000488627 RAB7BQ96AH8 199 aa16.16■□□□□ 0.18
CTDSP1-209ENST00000488627 FAF2Q96CS3 445 aa16.16■□□□□ 0.18
CTDSP1-209ENST00000488627 EXOC2Q96KP1 924 aa16.16■□□□□ 0.18
CTDSP1-209ENST00000488627 NSMCE3Q96MG7 304 aa16.16■□□□□ 0.18
CTDSP1-209ENST00000488627 AASDHPPTQ9NRN7 309 aa16.16■□□□□ 0.18
CTDSP1-209ENST00000488627 DKK3Q9UBP4 350 aa16.16■□□□□ 0.18
CTDSP1-209ENST00000488627 TMEM110-MUSTN1A8MSY1 372 aa16.15■□□□□ 0.18
CTDSP1-209ENST00000488627 SLC31A1O15431 190 aa16.15■□□□□ 0.18
CTDSP1-209ENST00000488627 BUB1BO60566 1050 aaPredicted RBP16.15■□□□□ 0.18
CTDSP1-209ENST00000488627 MAFKO60675 156 aa16.15■□□□□ 0.18
CTDSP1-209ENST00000488627 PCDH8O95206 1070 aa16.15■□□□□ 0.18
CTDSP1-209ENST00000488627 CER1O95813 267 aa16.15■□□□□ 0.18
CTDSP1-209ENST00000488627 KRT7P08729 469 aa16.15■□□□□ 0.18
CTDSP1-209ENST00000488627 CEACAM1P13688 526 aa16.15■□□□□ 0.18
CTDSP1-209ENST00000488627 TIMP2P16035 220 aa16.15■□□□□ 0.18
CTDSP1-209ENST00000488627 PRLRP16471 622 aa16.15■□□□□ 0.18
CTDSP1-209ENST00000488627 NOVA1P51513 510 aaKnown RBP16.15■□□□□ 0.18
CTDSP1-209ENST00000488627 RAD51Q06609 339 aa16.15■□□□□ 0.18
CTDSP1-209ENST00000488627 NSUN2Q08J23 767 aaKnown RBP eCLIP16.15■□□□□ 0.18
CTDSP1-209ENST00000488627 SLC10A7Q0GE19 358 aa16.15■□□□□ 0.18
CTDSP1-209ENST00000488627 KRT81Q14533 505 aa16.15■□□□□ 0.18
CTDSP1-209ENST00000488627 RFTN1Q14699 578 aaPredicted RBP16.15■□□□□ 0.18
CTDSP1-209ENST00000488627 PDK2Q15119 407 aa16.15■□□□□ 0.18
CTDSP1-209ENST00000488627 ZNF423Q2M1K9 1284 aa16.15■□□□□ 0.18
CTDSP1-209ENST00000488627 N4BP2L1Q5TBK1 243 aaPredicted RBP16.15■□□□□ 0.18
CTDSP1-209ENST00000488627 CCDC170Q8IYT3 715 aa16.15■□□□□ 0.18
CTDSP1-209ENST00000488627 MFSD2AQ8NA29 543 aa16.15■□□□□ 0.18
CTDSP1-209ENST00000488627 KCTD6Q8NC69 237 aa16.15■□□□□ 0.18
CTDSP1-209ENST00000488627 RAPGEF5Q92565 580 aa16.15■□□□□ 0.18
CTDSP1-209ENST00000488627 KLK6Q92876 244 aa16.15■□□□□ 0.18
CTDSP1-209ENST00000488627 ZNF599Q96NL3 588 aa16.15■□□□□ 0.18
CTDSP1-209ENST00000488627 PANX2Q96RD6 677 aa16.15■□□□□ 0.18
CTDSP1-209ENST00000488627 SP110Q9HB58 689 aa16.15■□□□□ 0.18
CTDSP1-209ENST00000488627 TM7SF3Q9NS93 570 aa16.15■□□□□ 0.18
CTDSP1-209ENST00000488627 CA5BQ9Y2D0 317 aa16.15■□□□□ 0.18
CTDSP1-209ENST00000488627 PRAMEF26H0Y7S4 382 aa16.14■□□□□ 0.17
CTDSP1-209ENST00000488627 H0Y8X5 98 aa16.14■□□□□ 0.17
CTDSP1-209ENST00000488627 TLR4O00206 839 aa16.14■□□□□ 0.17
CTDSP1-209ENST00000488627 SH3BP5O60239 455 aa16.14■□□□□ 0.17
CTDSP1-209ENST00000488627 PIGNO95427 931 aa16.14■□□□□ 0.17
CTDSP1-209ENST00000488627 ADRB1P08588 477 aa16.14■□□□□ 0.17
CTDSP1-209ENST00000488627 GJC1P36383 396 aa16.14■□□□□ 0.17
CTDSP1-209ENST00000488627 MAGEA1P43355 309 aa16.14■□□□□ 0.17
CTDSP1-209ENST00000488627 C21orf59P57076 290 aa16.14■□□□□ 0.17
CTDSP1-209ENST00000488627 PAFAH1B3Q15102 231 aaKnown RBP16.14■□□□□ 0.17
CTDSP1-209ENST00000488627 SETMARQ53H47 684 aaPredicted RBP16.14■□□□□ 0.17
CTDSP1-209ENST00000488627 ANKRD20A8PQ5CZ79 823 aa16.14■□□□□ 0.17
CTDSP1-209ENST00000488627 PRAMEF14Q5SWL7 426 aa16.14■□□□□ 0.17
CTDSP1-209ENST00000488627 NCBP2-AS2Q69YL0 99 aa16.14■□□□□ 0.17
CTDSP1-209ENST00000488627 ADAT2Q7Z6V5 191 aaKnown RBP16.14■□□□□ 0.17
CTDSP1-209ENST00000488627 IQCHQ86VS3 1027 aa16.14■□□□□ 0.17
CTDSP1-209ENST00000488627 SPATS2Q86XZ4 545 aaKnown RBP16.14■□□□□ 0.17
CTDSP1-209ENST00000488627 PQLC3Q8N755 202 aa16.14■□□□□ 0.17
CTDSP1-209ENST00000488627 HCAR2Q8TDS4 363 aa16.14■□□□□ 0.17
CTDSP1-209ENST00000488627 FEM1CQ96JP0 617 aa16.14■□□□□ 0.17
CTDSP1-209ENST00000488627 CAMK1GQ96NX5 476 aa16.14■□□□□ 0.17
CTDSP1-209ENST00000488627 PSKH2Q96QS6 385 aa16.14■□□□□ 0.17
CTDSP1-209ENST00000488627 ZNF670Q9BS34 389 aa16.14■□□□□ 0.17
CTDSP1-209ENST00000488627 C1QTNF2Q9BXJ5 285 aa16.14■□□□□ 0.17
CTDSP1-209ENST00000488627 KLHL11Q9NVR0 708 aa16.14■□□□□ 0.17
CTDSP1-209ENST00000488627 GGT7Q9UJ14 662 aa16.14■□□□□ 0.17
CTDSP1-209ENST00000488627 ITM2BQ9Y287 266 aa16.14■□□□□ 0.17
CTDSP1-209ENST00000488627 PCDHGB2Q9Y5G2 931 aa16.14■□□□□ 0.17
CTDSP1-209ENST00000488627 TSPAN11A1L157 253 aa16.13■□□□□ 0.17
CTDSP1-209ENST00000488627 C3orf70A6NLC5 250 aaPredicted RBP16.13■□□□□ 0.17
CTDSP1-209ENST00000488627 TSPAN6O43657 245 aa16.13■□□□□ 0.17
CTDSP1-209ENST00000488627 CBFA2T3O75081 653 aa16.13■□□□□ 0.17
CTDSP1-209ENST00000488627 ITIH2P19823 946 aa16.13■□□□□ 0.17
CTDSP1-209ENST00000488627 CR2P20023 1033 aa16.13■□□□□ 0.17
CTDSP1-209ENST00000488627 KDELR1P24390 212 aa16.13■□□□□ 0.17
CTDSP1-209ENST00000488627 SERPINB6P35237 376 aa16.13■□□□□ 0.17
CTDSP1-209ENST00000488627 HADHBP55084 474 aaKnown RBP16.13■□□□□ 0.17
CTDSP1-209ENST00000488627 NXPH1P58417 271 aa16.13■□□□□ 0.17
CTDSP1-209ENST00000488627 RPS21P63220 83 aaKnown RBP16.13■□□□□ 0.17
CTDSP1-209ENST00000488627 FAM193AP78312 1265 aa16.13■□□□□ 0.17
CTDSP1-209ENST00000488627 LBRQ14739 615 aaKnown RBP16.13■□□□□ 0.17
CTDSP1-209ENST00000488627 SHBQ15464 509 aa16.13■□□□□ 0.17
CTDSP1-209ENST00000488627 TMCO4Q5TGY1 634 aa16.13■□□□□ 0.17
CTDSP1-209ENST00000488627 KIAA1161Q6NSJ0 714 aa16.13■□□□□ 0.17
CTDSP1-209ENST00000488627 SRLQ86TD4 932 aa16.13■□□□□ 0.17
CTDSP1-209ENST00000488627 TTC7BQ86TV6 843 aa16.13■□□□□ 0.17
CTDSP1-209ENST00000488627 ZSWIM9Q86XI8 627 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms