RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 KCTD13Q8WZ19 329 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 FAM149B1Q96BN6 582 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 FAXDC2Q96IV6 333 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 ZC3H10Q96K80 434 aaKnown RBP6.13□□□□□ -1.43
CDHR3-213ENST00000488386 EXOC2Q96KP1 924 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 PRICKLE1Q96MT3 831 aaPredicted RBP6.13□□□□□ -1.43
CDHR3-213ENST00000488386 EDEM2Q9BV94 578 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 UBXN6Q9BZV1 441 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 CIPCQ9C0C6 399 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 DNAI2Q9GZS0 605 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 EPB41L4BQ9H329 900 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 SIX2Q9NPC8 291 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 CNGB3Q9NQW8 809 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 SAMSN1Q9NSI8 373 aaKnown RBP6.13□□□□□ -1.43
CDHR3-213ENST00000488386 LMBRD1Q9NUN5 540 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 WDR35Q9P2L0 1181 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 PLA2G2DQ9UNK4 145 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 STON1Q9Y6Q2 735 aa6.13□□□□□ -1.43
CDHR3-213ENST00000488386 MUC22E2RYF6 1773 aaPredicted RBP6.13□□□□□ -1.43
CDHR3-213ENST00000488386 TRBV23OR9-2A0A075B6M9 112 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 TRAV20A0A0B4J274 112 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 IGHV1OR15-9A0A0B4J2B8 117 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 BCLAF3A2AJT9 711 aaKnown RBP6.12□□□□□ -1.43
CDHR3-213ENST00000488386 OR14I1A6ND48 311 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 C4orf47A7E2U8 309 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 NUDT19A8MXV4 375 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 PRR5-ARHGAP8B1AHC4 643 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 KCNJ18B7U540 433 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 PES1O00541 588 aaKnown RBP6.12□□□□□ -1.43
CDHR3-213ENST00000488386 SLC30A4O14863 429 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 PMM2O15305 246 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 P4HA2O15460 535 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 PAPSS1O43252 624 aaPredicted RBP6.12□□□□□ -1.43
CDHR3-213ENST00000488386 ZNF292O60281 2723 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 TBL1XO60907 577 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 ALDH1A2O94788 518 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 RHOBTB1O94844 696 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 GNA14O95837 355 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 CPP00450 1065 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 CYBBP04839 570 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 DBHP09172 617 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 ZNF806P0C7X5 589 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 PON1P27169 355 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 HLA-FP30511 346 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 CD70P32970 193 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 P2RY2P41231 377 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 HARS2P49590 506 aaKnown RBP6.12□□□□□ -1.43
CDHR3-213ENST00000488386 KLK7P49862 253 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 TBX4P57082 545 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 RPS24P62847 133 aaKnown RBP6.12□□□□□ -1.43
CDHR3-213ENST00000488386 IRX4P78413 519 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 ARHGAP8P85298 464 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 ZNF234Q14588 700 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 TESK1Q15569 626 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 EXOC3L4Q17RC7 722 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 UAP1L1Q3KQV9 507 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 FUT11Q495W5 492 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 C2CD6Q53TS8 623 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 FAM133BQ5BKY9 247 aaKnown RBP6.12□□□□□ -1.43
CDHR3-213ENST00000488386 MIIPQ5JXC2 388 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 STPG1Q5TH74 334 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 TAF3Q5VWG9 929 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 E4F1Q66K89 784 aaPredicted RBP6.12□□□□□ -1.43
CDHR3-213ENST00000488386 USP53Q70EK8 1073 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 CHST9Q7L1S5 443 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 FAM124AQ86V42 546 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 SLC47A2Q86VL8 602 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 CIR1Q86X95 450 aaPredicted RBP6.12□□□□□ -1.43
CDHR3-213ENST00000488386 SLC41A1Q8IVJ1 513 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 CFAP52Q8N1V2 620 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 CPXM2Q8N436 756 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 WDTC1Q8N5D0 677 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 KIAA1958Q8N8K9 716 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 C1orf131Q8NDD1 294 aaKnown RBP6.12□□□□□ -1.43
CDHR3-213ENST00000488386 RCBTB1Q8NDN9 531 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 GPT2Q8TD30 523 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 ZNF606Q8WXB4 792 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 DIO2Q92813 273 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 CCDC140Q96MF4 163 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 CDK5RAP1Q96SZ6 601 aaKnown RBP6.12□□□□□ -1.43
CDHR3-213ENST00000488386 RTKNQ9BST9 563 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 DCLK3Q9C098 648 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 NUP62CLQ9H1M0 184 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 CD248Q9HCU0 757 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 ABCC13Q9NSE7 274 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 ABCB8Q9NUT2 735 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 FAM53CQ9NYF3 392 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 TAB2Q9NYJ8 693 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 KLHL14Q9P2G3 628 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 THAP10Q9P2Z0 257 aaPredicted RBP6.12□□□□□ -1.43
CDHR3-213ENST00000488386 FBXO10Q9UK96 956 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 DNAJC12Q9UKB3 198 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 KIAA1257Q9ULG3 409 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 PLXND1Q9Y4D7 1925 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 SNX10Q9Y5X0 201 aa6.12□□□□□ -1.43
CDHR3-213ENST00000488386 CEP250Q9BV73 2442 aa6.11□□□□□ -1.43
CDHR3-213ENST00000488386 A0A1W2PQC6 194 aa6.11□□□□□ -1.43
CDHR3-213ENST00000488386 LNP1A1A4G5 178 aa6.11□□□□□ -1.43
CDHR3-213ENST00000488386 FOXN3O00409 490 aaPredicted RBP6.11□□□□□ -1.43
CDHR3-213ENST00000488386 ACSL4O60488 711 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms