RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 RARAP10276 462 aa20.72■□□□□ 0.91
HDAC4-209ENST00000487617 HNRNPA2B1P22626 353 aaKnown RBP20.72■□□□□ 0.91
HDAC4-209ENST00000487617 ABL2P42684 1182 aa20.72■□□□□ 0.91
HDAC4-209ENST00000487617 SSR1P43307 286 aaKnown RBP20.72■□□□□ 0.91
HDAC4-209ENST00000487617 RPS21P63220 83 aaKnown RBP20.72■□□□□ 0.91
HDAC4-209ENST00000487617 SLC18A3Q16572 532 aa20.72■□□□□ 0.91
HDAC4-209ENST00000487617 TMEM259Q4ZIN3 620 aa20.72■□□□□ 0.91
HDAC4-209ENST00000487617 TXNRD3NBQ6F5E7 133 aa20.72■□□□□ 0.91
HDAC4-209ENST00000487617 KIAA1161Q6NSJ0 714 aa20.72■□□□□ 0.91
HDAC4-209ENST00000487617 ARHGAP12Q8IWW6 846 aa20.72■□□□□ 0.91
HDAC4-209ENST00000487617 NPWQ8N729 165 aa20.72■□□□□ 0.91
HDAC4-209ENST00000487617 TMEM145Q8NBT3 493 aa20.72■□□□□ 0.91
HDAC4-209ENST00000487617 ZNF564Q8TBZ8 553 aaPredicted RBP20.72■□□□□ 0.91
HDAC4-209ENST00000487617 VOPP1Q96AW1 172 aa20.72■□□□□ 0.91
HDAC4-209ENST00000487617 KLHDC7BQ96G42 594 aa20.72■□□□□ 0.91
HDAC4-209ENST00000487617 EXOC2Q96KP1 924 aa20.72■□□□□ 0.91
HDAC4-209ENST00000487617 CDC6Q99741 560 aa20.72■□□□□ 0.91
HDAC4-209ENST00000487617 SP110Q9HB58 689 aa20.72■□□□□ 0.91
HDAC4-209ENST00000487617 MFHAS1Q9Y4C4 1052 aa20.72■□□□□ 0.91
HDAC4-209ENST00000487617 YKT6O15498 198 aa20.71■□□□□ 0.91
HDAC4-209ENST00000487617 INSIG1O15503 277 aa20.71■□□□□ 0.91
HDAC4-209ENST00000487617 SPINK2P20155 84 aa20.71■□□□□ 0.91
HDAC4-209ENST00000487617 GRK6P43250 576 aa20.71■□□□□ 0.91
HDAC4-209ENST00000487617 ARRB1P49407 418 aaPredicted RBP20.71■□□□□ 0.91
HDAC4-209ENST00000487617 INAVAQ3KP66 663 aa20.71■□□□□ 0.91
HDAC4-209ENST00000487617 POLNQ7Z5Q5 900 aa20.71■□□□□ 0.91
HDAC4-209ENST00000487617 SPATS2Q86XZ4 545 aaKnown RBP20.71■□□□□ 0.91
HDAC4-209ENST00000487617 GATAD2AQ86YP4 633 aa20.71■□□□□ 0.91
HDAC4-209ENST00000487617 LZTR1Q8N653 840 aa20.71■□□□□ 0.91
HDAC4-209ENST00000487617 TEKT4Q8WW24 435 aa20.71■□□□□ 0.91
HDAC4-209ENST00000487617 CTNNBL1Q8WYA6 563 aaPredicted RBP20.71■□□□□ 0.91
HDAC4-209ENST00000487617 ERVMER34-1Q9H9K5 563 aa20.71■□□□□ 0.91
HDAC4-209ENST00000487617 ABHD10Q9NUJ1 306 aa20.71■□□□□ 0.91
HDAC4-209ENST00000487617 CTTNBP2NLQ9P2B4 639 aa20.71■□□□□ 0.91
HDAC4-209ENST00000487617 ITM2BQ9Y287 266 aa20.71■□□□□ 0.91
HDAC4-209ENST00000487617 SSU72P8A0A1W2PR75 194 aa20.7■□□□□ 0.9
HDAC4-209ENST00000487617 TSPAN6O43657 245 aa20.7■□□□□ 0.9
HDAC4-209ENST00000487617 MFAP3LO75121 409 aa20.7■□□□□ 0.9
HDAC4-209ENST00000487617 PALMO75781 387 aa20.7■□□□□ 0.9
HDAC4-209ENST00000487617 ITGAVP06756 1048 aa20.7■□□□□ 0.9
HDAC4-209ENST00000487617 H2AFZP0C0S5 128 aa20.7■□□□□ 0.9
HDAC4-209ENST00000487617 FTH1P19P0C7X4 201 aa20.7■□□□□ 0.9
HDAC4-209ENST00000487617 AMPD1P23109 780 aa20.7■□□□□ 0.9
HDAC4-209ENST00000487617 ADKP55263 362 aaKnown RBP20.7■□□□□ 0.9
HDAC4-209ENST00000487617 SLC25A11Q02978 314 aaKnown RBP20.7■□□□□ 0.9
HDAC4-209ENST00000487617 SHBQ15464 509 aa20.7■□□□□ 0.9
HDAC4-209ENST00000487617 HADHQ16836 314 aaKnown RBP20.7■□□□□ 0.9
HDAC4-209ENST00000487617 ARHGAP36Q6ZRI8 547 aa20.7■□□□□ 0.9
HDAC4-209ENST00000487617 H2AFVQ71UI9 128 aa20.7■□□□□ 0.9
HDAC4-209ENST00000487617 GLRX5Q86SX6 157 aa20.7■□□□□ 0.9
HDAC4-209ENST00000487617 TTC7BQ86TV6 843 aa20.7■□□□□ 0.9
HDAC4-209ENST00000487617 OXR1Q8N573 874 aa20.7■□□□□ 0.9
HDAC4-209ENST00000487617 BAHD1Q8TBE0 780 aaPredicted RBP20.7■□□□□ 0.9
HDAC4-209ENST00000487617 CSPG4P5Q96PW8 444 aa20.7■□□□□ 0.9
HDAC4-209ENST00000487617 PACSIN1Q9BY11 444 aa20.7■□□□□ 0.9
HDAC4-209ENST00000487617 SLC17A9Q9BYT1 436 aa20.7■□□□□ 0.9
HDAC4-209ENST00000487617 CPEB1Q9BZB8 566 aaKnown RBP20.7■□□□□ 0.9
HDAC4-209ENST00000487617 PCDH18Q9HCL0 1135 aa20.7■□□□□ 0.9
HDAC4-209ENST00000487617 UVRAGQ9P2Y5 699 aa20.7■□□□□ 0.9
HDAC4-209ENST00000487617 WASF3Q9UPY6 502 aa20.7■□□□□ 0.9
HDAC4-209ENST00000487617 APOBEC2Q9Y235 224 aaKnown RBP20.7■□□□□ 0.9
HDAC4-209ENST00000487617 IGLON5A6NGN9 336 aa20.69■□□□□ 0.9
HDAC4-209ENST00000487617 HYAL3O43820 417 aaPredicted RBP20.69■□□□□ 0.9
HDAC4-209ENST00000487617 AKR1B10O60218 316 aa20.69■□□□□ 0.9
HDAC4-209ENST00000487617 TRIM16O95361 564 aa20.69■□□□□ 0.9
HDAC4-209ENST00000487617 PIGNO95427 931 aa20.69■□□□□ 0.9
HDAC4-209ENST00000487617 PAK4O96013 591 aaPredicted RBP20.69■□□□□ 0.9
HDAC4-209ENST00000487617 THEGLP0DJG4 465 aa20.69■□□□□ 0.9
HDAC4-209ENST00000487617 CLDN2P57739 230 aa20.69■□□□□ 0.9
HDAC4-209ENST00000487617 SGCGQ13326 291 aa20.69■□□□□ 0.9
HDAC4-209ENST00000487617 FGL2Q14314 439 aa20.69■□□□□ 0.9
HDAC4-209ENST00000487617 KRT81Q14533 505 aa20.69■□□□□ 0.9
HDAC4-209ENST00000487617 ASTE1Q2TB18 679 aaPredicted RBP20.69■□□□□ 0.9
HDAC4-209ENST00000487617 LRRC73Q5JTD7 316 aa20.69■□□□□ 0.9
HDAC4-209ENST00000487617 TMCO3Q6UWJ1 677 aa20.69■□□□□ 0.9
HDAC4-209ENST00000487617 ZSCAN30Q86W11 494 aa20.69■□□□□ 0.9
HDAC4-209ENST00000487617 CINPQ9BW66 212 aaPredicted RBP20.69■□□□□ 0.9
HDAC4-209ENST00000487617 SCNM1Q9BWG6 230 aa20.69■□□□□ 0.9
HDAC4-209ENST00000487617 ETNK2Q9NVF9 386 aa20.69■□□□□ 0.9
HDAC4-209ENST00000487617 DKK3Q9UBP4 350 aa20.69■□□□□ 0.9
HDAC4-209ENST00000487617 IPO11Q9UI26 975 aaKnown RBP20.69■□□□□ 0.9
HDAC4-209ENST00000487617 GGT7Q9UJ14 662 aa20.69■□□□□ 0.9
HDAC4-209ENST00000487617 EPHA8P29322 1005 aaPredicted RBP20.68■□□□□ 0.9
HDAC4-209ENST00000487617 RXRGP48443 463 aa20.68■□□□□ 0.9
HDAC4-209ENST00000487617 IL10RBQ08334 325 aa20.68■□□□□ 0.9
HDAC4-209ENST00000487617 GRM3Q14832 879 aa20.68■□□□□ 0.9
HDAC4-209ENST00000487617 GCNT7Q6ZNI0 430 aa20.68■□□□□ 0.9
HDAC4-209ENST00000487617 TP53INP2Q8IXH6 220 aa20.68■□□□□ 0.9
HDAC4-209ENST00000487617 PNPLA1Q8N8W4 532 aa20.68■□□□□ 0.9
HDAC4-209ENST00000487617 OR13H1Q8NG92 308 aa20.68■□□□□ 0.9
HDAC4-209ENST00000487617 SAP25Q8TEE9 199 aa20.68■□□□□ 0.9
HDAC4-209ENST00000487617 CHP1Q99653 195 aa20.68■□□□□ 0.9
HDAC4-209ENST00000487617 TMEM131Q92545 1883 aa20.68■□□□□ 0.9
HDAC4-209ENST00000487617 CABIN1Q9Y6J0 2220 aa20.68■□□□□ 0.9
HDAC4-209ENST00000487617 A6NNZ2 444 aa20.67■□□□□ 0.9
HDAC4-209ENST00000487617 AREL1O15033 823 aa20.67■□□□□ 0.9
HDAC4-209ENST00000487617 SPINT1O43278 529 aa20.67■□□□□ 0.9
HDAC4-209ENST00000487617 PROSCO94903 275 aa20.67■□□□□ 0.9
HDAC4-209ENST00000487617 TIMP2P16035 220 aa20.67■□□□□ 0.9
HDAC4-209ENST00000487617 XPAP23025 273 aaPredicted RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms