RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 SIGLEC10Q96LC7 697 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 YME1L1Q96TA2 773 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 COG4Q9H9E3 785 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 TMPRSS4Q9NRS4 437 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 CROTQ9UKG9 612 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 NT5C1B-RDH14C9J2C7 533 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 NRP1O14786 923 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 RAG1P15918 1043 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 PSMA4P25789 261 aaKnown RBP11.93□□□□□ -0.5
TRA2B-214ENST00000487615 TKTP29401 623 aaKnown RBP11.93□□□□□ -0.5
TRA2B-214ENST00000487615 SMARCB1Q12824 385 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 PDE1CQ14123 709 aaPredicted RBP11.93□□□□□ -0.5
TRA2B-214ENST00000487615 PAFAH1B3Q15102 231 aaKnown RBP11.93□□□□□ -0.5
TRA2B-214ENST00000487615 GDF6Q6KF10 455 aaPredicted RBP11.93□□□□□ -0.5
TRA2B-214ENST00000487615 C16orf59Q7L2K0 433 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 UBR7Q8N806 425 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 RTL3Q8N8U3 475 aaKnown RBP11.93□□□□□ -0.5
TRA2B-214ENST00000487615 ASPSCR1Q9BZE9 553 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 AGO3Q9H9G7 860 aaKnown RBP11.93□□□□□ -0.5
TRA2B-214ENST00000487615 CASS4Q9NQ75 786 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 VWA7Q9Y334 891 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 SNX13Q9Y5W8 968 aa11.93□□□□□ -0.5
TRA2B-214ENST00000487615 ZBTB42B2RXF5 422 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 BTN3A1O00481 513 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 PIRTP0C851 137 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 NMBRP28336 390 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 DUSP4Q13115 394 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 NFYCQ13952 458 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 BTG3Q14201 252 aaPredicted RBP11.92□□□□□ -0.5
TRA2B-214ENST00000487615 UBAP2Q5T6F2 1119 aaKnown RBP11.92□□□□□ -0.5
TRA2B-214ENST00000487615 RBM15BQ8NDT2 890 aaKnown RBP11.92□□□□□ -0.5
TRA2B-214ENST00000487615 STAG3L4Q8TBR4 150 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 PPP2R3CQ969Q6 453 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 RHOBTB2Q9BYZ6 727 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 SPTLC1O15269 473 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 CA12O43570 354 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 GPR32O75388 356 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 ZNF7P17097 686 aaPredicted RBP11.92□□□□□ -0.5
TRA2B-214ENST00000487615 GRK4P32298 578 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 PRKD1Q15139 912 aaPredicted RBP11.92□□□□□ -0.5
TRA2B-214ENST00000487615 PFKFB4Q16877 469 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 ZFP1Q6P2D0 407 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 DENND1CQ8IV53 801 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 UNC5BQ8IZJ1 945 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 TMEM130Q8N3G9 435 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 SNX31Q8N9S9 440 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 FOPNLQ96NB1 174 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 HAPLN3Q96S86 360 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 SMOQ99835 787 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 SLC25A51Q9H1U9 297 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 WDR41Q9HAD4 459 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 DYRK4Q9NR20 520 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 TCAF1Q9Y4C2 921 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 A0A0U1RQF3 1178 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 KCNU1A8MYU2 1149 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 PSMD12O00232 456 aaPredicted RBP11.92□□□□□ -0.5
TRA2B-214ENST00000487615 YBEYP58557 167 aaPredicted RBP11.92□□□□□ -0.5
TRA2B-214ENST00000487615 SOX4Q06945 474 aaPredicted RBP11.92□□□□□ -0.5
TRA2B-214ENST00000487615 HNRNPDQ14103 355 aaKnown RBP11.92□□□□□ -0.5
TRA2B-214ENST00000487615 THEMIS2Q5TEJ8 643 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 CAND1Q86VP6 1230 aaKnown RBP11.92□□□□□ -0.5
TRA2B-214ENST00000487615 AGAP2Q99490 1192 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 TRMT13Q9NUP7 481 aaKnown RBP11.92□□□□□ -0.5
TRA2B-214ENST00000487615 EOMESO95936 686 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 PKNOX1P55347 436 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 FRG1Q14331 258 aaKnown RBP11.92□□□□□ -0.5
TRA2B-214ENST00000487615 USP41Q3LFD5 358 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 PARP15Q460N3 678 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 ARHGAP15Q53QZ3 475 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 DDX53Q86TM3 631 aaKnown RBP11.92□□□□□ -0.5
TRA2B-214ENST00000487615 PTGR2Q8N8N7 351 aaPredicted RBP11.92□□□□□ -0.5
TRA2B-214ENST00000487615 RP9Q8TA86 221 aaKnown RBP11.92□□□□□ -0.5
TRA2B-214ENST00000487615 GDPD5Q8WTR4 605 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 AZIN2Q96A70 460 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 TTPALQ9BTX7 342 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 CRTAC1Q9NQ79 661 aa11.92□□□□□ -0.5
TRA2B-214ENST00000487615 EIF3LQ9Y262 564 aaKnown RBP11.92□□□□□ -0.5
TRA2B-214ENST00000487615 SYN3O14994 580 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 BAIAP3O94812 1187 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 HNRNPLP14866 589 aaKnown RBP eCLIP11.91□□□□□ -0.5
TRA2B-214ENST00000487615 POLD2P49005 469 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 VARS2Q5ST30 1063 aaKnown RBP11.91□□□□□ -0.5
TRA2B-214ENST00000487615 ARMC12Q5T9G4 340 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 ESRP1Q6NXG1 681 aaKnown RBP11.91□□□□□ -0.5
TRA2B-214ENST00000487615 IRGCQ6NXR0 463 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 KIAA0408Q6ZU52 694 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 HS6ST3Q8IZP7 471 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 FUBP3Q96I24 572 aaKnown RBP eCLIP11.91□□□□□ -0.5
TRA2B-214ENST00000487615 EXOC2Q96KP1 924 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 PPP1R10Q96QC0 940 aaKnown RBP11.91□□□□□ -0.5
TRA2B-214ENST00000487615 ECSITQ9BQ95 431 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 OSBPL2Q9H1P3 480 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 DENND2DQ9H6A0 471 aaPredicted RBP11.91□□□□□ -0.5
TRA2B-214ENST00000487615 SLC17A6Q9P2U8 582 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 SEC24DO94855 1032 aaPredicted RBP11.91□□□□□ -0.5
TRA2B-214ENST00000487615 MPSTP25325 297 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 PRKCZQ05513 592 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 NR6A1Q15406 480 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 TMEM259Q4ZIN3 620 aa11.91□□□□□ -0.5
TRA2B-214ENST00000487615 TTC7BQ86TV6 843 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms