RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 JCHAINP01591 159 aa19.81■□□□□ 0.76
SEC22A-208ENST00000487572 APOC2P02655 101 aa19.81■□□□□ 0.76
SEC22A-208ENST00000487572 CSNK1DP48730 415 aa19.81■□□□□ 0.76
SEC22A-208ENST00000487572 ADPRHP54922 357 aa19.81■□□□□ 0.76
SEC22A-208ENST00000487572 NSUN2Q08J23 767 aaKnown RBP eCLIP19.81■□□□□ 0.76
SEC22A-208ENST00000487572 ZNF805Q5CZA5 627 aa19.81■□□□□ 0.76
SEC22A-208ENST00000487572 ZNF569Q5MCW4 686 aa19.81■□□□□ 0.76
SEC22A-208ENST00000487572 PIP5KL1Q5T9C9 394 aa19.81■□□□□ 0.76
SEC22A-208ENST00000487572 AGBL4Q5VU57 503 aa19.81■□□□□ 0.76
SEC22A-208ENST00000487572 ERN2Q76MJ5 926 aaKnown RBP19.81■□□□□ 0.76
SEC22A-208ENST00000487572 PARS2Q7L3T8 475 aaKnown RBP19.81■□□□□ 0.76
SEC22A-208ENST00000487572 TEX26Q8N6G2 289 aa19.81■□□□□ 0.76
SEC22A-208ENST00000487572 PAF1Q8N7H5 531 aa19.81■□□□□ 0.76
SEC22A-208ENST00000487572 TFB1MQ8WVM0 346 aaKnown RBP19.81■□□□□ 0.76
SEC22A-208ENST00000487572 UBE2Q2Q8WVN8 375 aa19.81■□□□□ 0.76
SEC22A-208ENST00000487572 FATE1Q969F0 183 aa19.81■□□□□ 0.76
SEC22A-208ENST00000487572 VOPP1Q96AW1 172 aa19.81■□□□□ 0.76
SEC22A-208ENST00000487572 HSPA12BQ96MM6 686 aa19.81■□□□□ 0.76
SEC22A-208ENST00000487572 MGME1Q9BQP7 344 aa19.81■□□□□ 0.76
SEC22A-208ENST00000487572 CEP41Q9BYV8 373 aa19.81■□□□□ 0.76
SEC22A-208ENST00000487572 BRD8Q9H0E9 1235 aa19.81■□□□□ 0.76
SEC22A-208ENST00000487572 NCDNQ9UBB6 729 aa19.81■□□□□ 0.76
SEC22A-208ENST00000487572 GMEB2Q9UKD1 530 aa19.81■□□□□ 0.76
SEC22A-208ENST00000487572 C16orf96A6NNT2 1141 aa19.8■□□□□ 0.76
SEC22A-208ENST00000487572 MEI4A8MW99 385 aa19.8■□□□□ 0.76
SEC22A-208ENST00000487572 H7C0C1 242 aa19.8■□□□□ 0.76
SEC22A-208ENST00000487572 KIF5CO60282 957 aa19.8■□□□□ 0.76
SEC22A-208ENST00000487572 HLA-DQB2P05538 268 aa19.8■□□□□ 0.76
SEC22A-208ENST00000487572 ATP5OP48047 213 aa19.8■□□□□ 0.76
SEC22A-208ENST00000487572 NEK3P51956 506 aa19.8■□□□□ 0.76
SEC22A-208ENST00000487572 AP1S1P61966 158 aa19.8■□□□□ 0.76
SEC22A-208ENST00000487572 OTUD4Q01804 1114 aaKnown RBP19.8■□□□□ 0.76
SEC22A-208ENST00000487572 ZBTB17Q13105 803 aa19.8■□□□□ 0.76
SEC22A-208ENST00000487572 PRKD1Q15139 912 aaPredicted RBP19.8■□□□□ 0.76
SEC22A-208ENST00000487572 CFAP58Q5T655 872 aa19.8■□□□□ 0.76
SEC22A-208ENST00000487572 LYSMD4Q5XG99 296 aa19.8■□□□□ 0.76
SEC22A-208ENST00000487572 FBXL19Q6PCT2 694 aa19.8■□□□□ 0.76
SEC22A-208ENST00000487572 NCEH1Q6PIU2 408 aa19.8■□□□□ 0.76
SEC22A-208ENST00000487572 ASCL5Q7RTU5 278 aa19.8■□□□□ 0.76
SEC22A-208ENST00000487572 CAMK1DQ8IU85 385 aa19.8■□□□□ 0.76
SEC22A-208ENST00000487572 SLC41A1Q8IVJ1 513 aa19.8■□□□□ 0.76
SEC22A-208ENST00000487572 ACTL9Q8TC94 416 aa19.8■□□□□ 0.76
SEC22A-208ENST00000487572 SNX19Q92543 992 aa19.8■□□□□ 0.76
SEC22A-208ENST00000487572 FAM122AQ96E09 287 aa19.8■□□□□ 0.76
SEC22A-208ENST00000487572 NUDCD1Q96RS6 583 aa19.8■□□□□ 0.76
SEC22A-208ENST00000487572 HINFPQ9BQA5 517 aa19.8■□□□□ 0.76
SEC22A-208ENST00000487572 TLR10Q9BXR5 811 aa19.8■□□□□ 0.76
SEC22A-208ENST00000487572 HDAC8Q9BY41 377 aa19.8■□□□□ 0.76
SEC22A-208ENST00000487572 CPEB1Q9BZB8 566 aaKnown RBP19.8■□□□□ 0.76
SEC22A-208ENST00000487572 ATP13A3Q9H7F0 1226 aa19.8■□□□□ 0.76
SEC22A-208ENST00000487572 ATXN2Q99700 1313 aaKnown RBP19.79■□□□□ 0.76
SEC22A-208ENST00000487572 TBC1D3DA0A087WVF3 549 aa19.79■□□□□ 0.76
SEC22A-208ENST00000487572 TBC1D3IA0A087WXS9 549 aa19.79■□□□□ 0.76
SEC22A-208ENST00000487572 TBC1D3EA0A087X179 549 aa19.79■□□□□ 0.76
SEC22A-208ENST00000487572 TBC1D3KA0A087X1G2 549 aa19.79■□□□□ 0.76
SEC22A-208ENST00000487572 GOLGA6L9A6NEM1 432 aa19.79■□□□□ 0.76
SEC22A-208ENST00000487572 TBC1D3FA6NER0 549 aaPredicted RBP19.79■□□□□ 0.76
SEC22A-208ENST00000487572 LRRC72A6NJI9 287 aa19.79■□□□□ 0.76
SEC22A-208ENST00000487572 TBC1D3LB9A6J9 549 aa19.79■□□□□ 0.76
SEC22A-208ENST00000487572 ENC1O14682 589 aa19.79■□□□□ 0.76
SEC22A-208ENST00000487572 SLC7A4O43246 635 aa19.79■□□□□ 0.76
SEC22A-208ENST00000487572 FSBPO95073 299 aa19.79■□□□□ 0.76
SEC22A-208ENST00000487572 TBC1D3HP0C7X1 549 aa19.79■□□□□ 0.76
SEC22A-208ENST00000487572 ADRB3P13945 408 aa19.79■□□□□ 0.76
SEC22A-208ENST00000487572 SERPINA4P29622 427 aa19.79■□□□□ 0.76
SEC22A-208ENST00000487572 MAPK8P45983 427 aa19.79■□□□□ 0.76
SEC22A-208ENST00000487572 IFI35P80217 286 aaPredicted RBP19.79■□□□□ 0.76
SEC22A-208ENST00000487572 CREB5Q02930 508 aa19.79■□□□□ 0.76
SEC22A-208ENST00000487572 ZNF33AQ06730 810 aa19.79■□□□□ 0.76
SEC22A-208ENST00000487572 BCL2L1Q07817 233 aa19.79■□□□□ 0.76
SEC22A-208ENST00000487572 CCDC15Q0P6D6 951 aa19.79■□□□□ 0.76
SEC22A-208ENST00000487572 GRM3Q14832 879 aa19.79■□□□□ 0.76
SEC22A-208ENST00000487572 NOMO1Q15155 1222 aa19.79■□□□□ 0.76
SEC22A-208ENST00000487572 LRRC73Q5JTD7 316 aa19.79■□□□□ 0.76
SEC22A-208ENST00000487572 TBC1D3GQ6DHY5 549 aa19.79■□□□□ 0.76
SEC22A-208ENST00000487572 TBC1D3CQ6IPX1 549 aa19.79■□□□□ 0.76
SEC22A-208ENST00000487572 CYP2U1Q7Z449 544 aa19.79■□□□□ 0.76
SEC22A-208ENST00000487572 TBC1D3Q8IZP1 549 aaPredicted RBP19.79■□□□□ 0.76
SEC22A-208ENST00000487572 SLC35F6Q8N357 371 aa19.79■□□□□ 0.76
SEC22A-208ENST00000487572 OR2T34Q8NGX1 318 aa19.79■□□□□ 0.76
SEC22A-208ENST00000487572 NSMCE3Q96MG7 304 aa19.79■□□□□ 0.76
SEC22A-208ENST00000487572 QKIQ96PU8 341 aaKnown RBP eCLIP19.79■□□□□ 0.764e-7■■■■■ 38
SEC22A-208ENST00000487572 TUBGCP5Q96RT8 1024 aa19.79■□□□□ 0.76
SEC22A-208ENST00000487572 SEMA3CQ99985 751 aa19.79■□□□□ 0.76
SEC22A-208ENST00000487572 POLR1EQ9GZS1 481 aaKnown RBP19.79■□□□□ 0.76
SEC22A-208ENST00000487572 SUV39H2Q9H5I1 410 aa19.79■□□□□ 0.76
SEC22A-208ENST00000487572 C10orf88Q9H8K7 445 aa19.79■□□□□ 0.76
SEC22A-208ENST00000487572 NOD2Q9HC29 1040 aa19.79■□□□□ 0.76
SEC22A-208ENST00000487572 HAUS2Q9NVX0 235 aa19.79■□□□□ 0.76
SEC22A-208ENST00000487572 TCRBV7S2A1N4TA0A589 114 aa19.78■□□□□ 0.76
SEC22A-208ENST00000487572 PLRG1O43660 514 aaKnown RBP19.78■□□□□ 0.76
SEC22A-208ENST00000487572 CR2P20023 1033 aa19.78■□□□□ 0.76
SEC22A-208ENST00000487572 ITPKAP23677 461 aa19.78■□□□□ 0.76
SEC22A-208ENST00000487572 EIF3EP60228 445 aaKnown RBP19.78■□□□□ 0.76
SEC22A-208ENST00000487572 DSC2Q02487 901 aa19.78■□□□□ 0.76
SEC22A-208ENST00000487572 SPDYCQ5MJ68 293 aa19.78■□□□□ 0.76
SEC22A-208ENST00000487572 ADAT2Q7Z6V5 191 aaKnown RBP19.78■□□□□ 0.76
SEC22A-208ENST00000487572 RGL4Q8IZJ4 473 aa19.78■□□□□ 0.76
SEC22A-208ENST00000487572 CADM4Q8NFZ8 388 aa19.78■□□□□ 0.76
SEC22A-208ENST00000487572 FOXJ1Q92949 421 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms