RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 FAM126AQ9BYI3 521 aaPredicted RBP12.92□□□□□ -0.34
PRDM2-208ENST00000487453 FRMD8P1Q9BZ68 369 aaPredicted RBP12.92□□□□□ -0.34
PRDM2-208ENST00000487453 ATP13A3Q9H7F0 1226 aa12.92□□□□□ -0.34
PRDM2-208ENST00000487453 AMACRQ9UHK6 382 aa12.92□□□□□ -0.34
PRDM2-208ENST00000487453 PPM1HQ9ULR3 514 aa12.92□□□□□ -0.34
PRDM2-208ENST00000487453 SCML1Q9UN30 329 aa12.92□□□□□ -0.34
PRDM2-208ENST00000487453 INVSQ9Y283 1065 aa12.92□□□□□ -0.34
PRDM2-208ENST00000487453 NCKAP1Q9Y2A7 1128 aa12.92□□□□□ -0.34
PRDM2-208ENST00000487453 EML5Q05BV3 1969 aa12.92□□□□□ -0.34
PRDM2-208ENST00000487453 CCDC163A0A0D9SF12 145 aa12.91□□□□□ -0.34
PRDM2-208ENST00000487453 GOLGA6L10A0A0M3HER8 536 aa12.91□□□□□ -0.34
PRDM2-208ENST00000487453 BCLAF3A2AJT9 711 aaKnown RBP12.91□□□□□ -0.34
PRDM2-208ENST00000487453 F5H423 210 aaPredicted RBP12.91□□□□□ -0.34
PRDM2-208ENST00000487453 PLK4O00444 970 aa12.91□□□□□ -0.34
PRDM2-208ENST00000487453 ZNF189O75820 626 aaPredicted RBP12.91□□□□□ -0.34
PRDM2-208ENST00000487453 NFKB1P19838 968 aa12.91□□□□□ -0.34
PRDM2-208ENST00000487453 CSNK1DP48730 415 aa12.91□□□□□ -0.34
PRDM2-208ENST00000487453 TPMTP51580 245 aa12.91□□□□□ -0.34
PRDM2-208ENST00000487453 WASHC5Q12768 1159 aa12.91□□□□□ -0.34
PRDM2-208ENST00000487453 SFSWAPQ12872 951 aaKnown RBP12.91□□□□□ -0.34
PRDM2-208ENST00000487453 SRSF5Q13243 272 aaKnown RBP12.91□□□□□ -0.34
PRDM2-208ENST00000487453 SIX1Q15475 284 aaPredicted RBP12.91□□□□□ -0.34
PRDM2-208ENST00000487453 PID1Q7Z2X4 250 aa12.91□□□□□ -0.34
PRDM2-208ENST00000487453 ZNF567Q8N184 647 aa12.91□□□□□ -0.34
PRDM2-208ENST00000487453 AADATQ8N5Z0 425 aa12.91□□□□□ -0.34
PRDM2-208ENST00000487453 FAM160A2Q8N612 972 aaPredicted RBP12.91□□□□□ -0.34
PRDM2-208ENST00000487453 CNTD1Q8N815 330 aa12.91□□□□□ -0.34
PRDM2-208ENST00000487453 TMIEQ8NEW7 156 aa12.91□□□□□ -0.34
PRDM2-208ENST00000487453 ACTRT1Q8TDG2 376 aa12.91□□□□□ -0.34
PRDM2-208ENST00000487453 PDCD6IPQ8WUM4 868 aaKnown RBP12.91□□□□□ -0.34
PRDM2-208ENST00000487453 LRIG1Q96JA1 1093 aa12.91□□□□□ -0.34
PRDM2-208ENST00000487453 KLHL32Q96NJ5 620 aa12.91□□□□□ -0.34
PRDM2-208ENST00000487453 TUBGCP5Q96RT8 1024 aa12.91□□□□□ -0.34
PRDM2-208ENST00000487453 VAT1Q99536 393 aa12.91□□□□□ -0.34
PRDM2-208ENST00000487453 TMEM121Q9BTD3 319 aa12.91□□□□□ -0.34
PRDM2-208ENST00000487453 NOD2Q9HC29 1040 aa12.91□□□□□ -0.34
PRDM2-208ENST00000487453 ZSCAN32Q9NX65 697 aa12.91□□□□□ -0.34
PRDM2-208ENST00000487453 FBXL12Q9NXK8 326 aa12.91□□□□□ -0.34
PRDM2-208ENST00000487453 USP36Q9P275 1121 aaKnown RBP12.91□□□□□ -0.34
PRDM2-208ENST00000487453 SERGEFQ9UGK8 458 aa12.91□□□□□ -0.34
PRDM2-208ENST00000487453 RSPH14Q9UHP6 348 aa12.91□□□□□ -0.34
PRDM2-208ENST00000487453 ZNF148Q9UQR1 794 aa12.91□□□□□ -0.34
PRDM2-208ENST00000487453 ATP8A1Q9Y2Q0 1164 aa12.91□□□□□ -0.34
PRDM2-208ENST00000487453 HCN4Q9Y3Q4 1203 aa12.91□□□□□ -0.34
PRDM2-208ENST00000487453 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.9□□□□□ -0.34
PRDM2-208ENST00000487453 CFAP69A5D8W1 941 aa12.9□□□□□ -0.34
PRDM2-208ENST00000487453 RPP40O75818 363 aaKnown RBP12.9□□□□□ -0.34
PRDM2-208ENST00000487453 PRLRP16471 622 aa12.9□□□□□ -0.34
PRDM2-208ENST00000487453 CR2P20023 1033 aa12.9□□□□□ -0.34
PRDM2-208ENST00000487453 ITGB7P26010 798 aa12.9□□□□□ -0.34
PRDM2-208ENST00000487453 DRD3P35462 400 aa12.9□□□□□ -0.34
PRDM2-208ENST00000487453 P2RY2P41231 377 aa12.9□□□□□ -0.34
PRDM2-208ENST00000487453 CD86P42081 329 aa12.9□□□□□ -0.34
PRDM2-208ENST00000487453 NEK3P51956 506 aa12.9□□□□□ -0.34
PRDM2-208ENST00000487453 CNTN1Q12860 1018 aa12.9□□□□□ -0.34
PRDM2-208ENST00000487453 CCNG2Q16589 344 aa12.9□□□□□ -0.34
PRDM2-208ENST00000487453 TEX44Q53QW1 395 aa12.9□□□□□ -0.34
PRDM2-208ENST00000487453 ZNF805Q5CZA5 627 aa12.9□□□□□ -0.34
PRDM2-208ENST00000487453 RALGPS1Q5JS13 557 aa12.9□□□□□ -0.34
PRDM2-208ENST00000487453 ITPRIPL1Q6GPH6 555 aa12.9□□□□□ -0.34
PRDM2-208ENST00000487453 NCEH1Q6PIU2 408 aa12.9□□□□□ -0.34
PRDM2-208ENST00000487453 ZC3H14Q6PJT7 736 aaKnown RBP12.9□□□□□ -0.34
PRDM2-208ENST00000487453 PARS2Q7L3T8 475 aaKnown RBP12.9□□□□□ -0.34
PRDM2-208ENST00000487453 GSTA5Q7RTV2 222 aa12.9□□□□□ -0.34
PRDM2-208ENST00000487453 KBTBD6Q86V97 674 aa12.9□□□□□ -0.34
PRDM2-208ENST00000487453 CAMK1DQ8IU85 385 aa12.9□□□□□ -0.34
PRDM2-208ENST00000487453 FAM71DQ8N9W8 422 aa12.9□□□□□ -0.34
PRDM2-208ENST00000487453 NKD2Q969F2 451 aaPredicted RBP12.9□□□□□ -0.34
PRDM2-208ENST00000487453 ARRDC3Q96B67 414 aa12.9□□□□□ -0.34
PRDM2-208ENST00000487453 TEKT5Q96M29 485 aa12.9□□□□□ -0.34
PRDM2-208ENST00000487453 CPEB1Q9BZB8 566 aaKnown RBP12.9□□□□□ -0.34
PRDM2-208ENST00000487453 ITM2CQ9NQX7 267 aa12.9□□□□□ -0.34
PRDM2-208ENST00000487453 HOMER3Q9NSC5 361 aa12.9□□□□□ -0.34
PRDM2-208ENST00000487453 TRHDEQ9UKU6 1024 aa12.9□□□□□ -0.34
PRDM2-208ENST00000487453 TTC7AQ9ULT0 858 aaPredicted RBP12.9□□□□□ -0.34
PRDM2-208ENST00000487453 FZD4Q9ULV1 537 aa12.9□□□□□ -0.34
PRDM2-208ENST00000487453 PCDHGA2Q9Y5H1 932 aa12.9□□□□□ -0.34
PRDM2-208ENST00000487453 MYO18AQ92614 2054 aaKnown RBP12.9□□□□□ -0.34
PRDM2-208ENST00000487453 PLXND1Q9Y4D7 1925 aa12.9□□□□□ -0.35
PRDM2-208ENST00000487453 IGHV1OR15-9A0A0B4J2B8 117 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 PRR23AA6NEV1 266 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 FAM47DPA6NHR8 397 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 KIF2AO00139 706 aaPredicted RBP12.89□□□□□ -0.35
PRDM2-208ENST00000487453 MAP3K13O43283 966 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 SOCS5O75159 536 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 NDUFS2O75306 463 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 CPP00450 1065 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 IFNB1P01574 187 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 SERPINF2P08697 491 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 CA4P22748 312 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 XPAP23025 273 aaPredicted RBP12.89□□□□□ -0.35
PRDM2-208ENST00000487453 CD6P30203 668 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 DEKP35659 375 aaKnown RBP12.89□□□□□ -0.35
PRDM2-208ENST00000487453 PAFAH1B1P43034 410 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 PTPN5P54829 565 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 GDF10P55107 478 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 OASLQ15646 514 aaKnown RBP12.89□□□□□ -0.35
PRDM2-208ENST00000487453 PCSK7Q16549 785 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 LRRC73Q5JTD7 316 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 ANKRD20A2Q5SQ80 823 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms