RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 SMIM35A0A1B0GVV1 85 aa5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 WIPF3A6NGB9 483 aa5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 K7ENM7 598 aa5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 KIR2DS3K7RE56 304 aa5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 PPP6CO00743 305 aa5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 SEC14L2O76054 403 aa5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 SEC31AO94979 1220 aaKnown RBP5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 MLYCDO95822 493 aa5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 SLC2A4P14672 509 aa5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 EDN2P20800 178 aa5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 ATP5F1P24539 256 aaPredicted RBP5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 YWHAQP27348 245 aa5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 BSGP35613 385 aa5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 SLC16A2P36021 539 aa5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 MLH1P40692 756 aa5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 CLCNKBP51801 687 aa5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 RARSP54136 660 aaKnown RBP5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 YWHAZP63104 245 aaKnown RBP5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 NHLH1Q02575 133 aa5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 ZNF91Q05481 1191 aa5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 TOMM20Q15388 145 aa5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 MEA1Q16626 185 aa5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 ALG10Q5BKT4 473 aa5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 ALG10BQ5I7T1 473 aa5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 ENTPD8Q5MY95 495 aa5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 TTC39AQ5SRH9 613 aa5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 KLHL24Q6TFL4 600 aa5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 CCDC129Q6ZRS4 1044 aa5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 SLC46A3Q7Z3Q1 461 aa5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 OR4N2Q8NGD1 307 aa5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 ATOH1Q92858 354 aaPredicted RBP5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 EME1Q96AY2 570 aa5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 QTRT1Q9BXR0 403 aaKnown RBP5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 MUC13Q9H3R2 512 aa5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 SPAG4Q9NPE6 437 aa5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 PAPOLBQ9NRJ5 636 aaKnown RBP5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 HAUS2Q9NVX0 235 aa5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 GPR34Q9UPC5 381 aa5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 FANCAO15360 1455 aa5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 RAPGEF2Q9Y4G8 1499 aa5.25□□□□□ -1.57
PRPF38A-203ENST00000487160 ZMYM4Q5VZL5 1548 aa5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 F8W810 466 aa5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 SNAP23O00161 211 aa5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 AP3D1O14617 1153 aa5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 CCNDBP1O95273 360 aa5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 CTSAP10619 480 aa5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 CERS1P27544 350 aa5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 PBX3P40426 434 aa5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 ARHGAP25P42331 645 aa5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 RPS13P62277 151 aaKnown RBP5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 SLC18A2Q05940 514 aa5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 VEPH1Q14D04 833 aa5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 MED22Q15528 200 aa5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 GSTA3Q16772 222 aa5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 PAPD7Q5XG87 772 aaKnown RBP5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 ATG9BQ674R7 924 aa5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 C16orf54Q6UWD8 224 aa5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 IKBIPQ70UQ0 350 aa5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 ADGRG3Q86Y34 549 aa5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 DPP10Q8N608 796 aa5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 PDILTQ8N807 584 aa5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 RASSF8Q8NHQ8 419 aa5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 TMEM170AQ8WVE7 144 aa5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 NELL1Q92832 810 aa5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 INTS12Q96CB8 462 aaKnown RBP5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 SIGLEC11Q96RL6 698 aa5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 LIMA1Q9UHB6 759 aaKnown RBP5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 AGO2Q9UKV8 859 aaKnown RBP5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 INTS6Q9UL03 887 aaKnown RBP5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 MKLN1Q9UL63 735 aa5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 CORO1CQ9ULV4 474 aaPredicted RBP5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 A4GNTQ9UNA3 340 aa5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 KCNE2Q9Y6J6 123 aa5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 CAPN7Q9Y6W3 813 aa5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 GOLGA3Q08378 1498 aa5.24□□□□□ -1.57
PRPF38A-203ENST00000487160 EFCAB5A4FU69 1503 aa5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 ZFYVE16Q7Z3T8 1539 aa5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 RAPGEF6Q8TEU7 1601 aa5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 TRBV5-3A0A0A0MS03 114 aa5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 CBY3A6NI87 242 aa5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 GTPBP1O00178 669 aaKnown RBP5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 RNMTO43148 476 aaKnown RBP5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 PRPF4O43172 522 aaKnown RBP eCLIP5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 AKAP8O43823 692 aaKnown RBP5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 BCAR3O75815 825 aa5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 HEXAP06865 529 aa5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 UNGP13051 313 aaPredicted RBP5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 HOXD13P35453 343 aa5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 GNAQP50148 359 aa5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 CLDN2P57739 230 aa5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 OLR1P78380 273 aa5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 KCTD2Q14681 263 aa5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 DAZAP2Q15038 168 aaPredicted RBP5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 CCNG2Q16589 344 aa5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 HMBOX1Q6NT76 420 aa5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 TTI2Q6NXR4 508 aa5.23□□□□□ -1.57
PRPF38A-203ENST00000487160 ZNF793Q6ZN11 406 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms