RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.63□□□□□ -1.51
SF1-217ENST00000486960 ZRANB3Q5FWF4 1079 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 TCEAL5Q5H9L2 206 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 ATAD3BQ5T9A4 648 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 RIPPLY2Q5TAB7 128 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 DCAF15Q66K64 600 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 ARL6IP4Q66PJ3 421 aaKnown RBP5.63□□□□□ -1.51
SF1-217ENST00000486960 HEPHL1Q6MZM0 1159 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 SUSD1Q6UWL2 747 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 ARHGAP36Q6ZRI8 547 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 RBM43Q6ZSC3 357 aaKnown RBP5.63□□□□□ -1.51
SF1-217ENST00000486960 LRRC8DQ7L1W4 858 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 ARMCX2Q7L311 632 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 HDXQ7Z353 690 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 ANKS1BQ7Z6G8 1248 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 TMCO2Q7Z6W1 182 aaPredicted RBP5.63□□□□□ -1.51
SF1-217ENST00000486960 SLC22A9Q8IVM8 553 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 C12orf56Q8IXR9 622 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 ZCCHC7Q8N3Z6 543 aaKnown RBP5.63□□□□□ -1.51
SF1-217ENST00000486960 WDTC1Q8N5D0 677 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 FRMD1Q8N878 549 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 SYT2Q8N9I0 419 aaPredicted RBP5.63□□□□□ -1.51
SF1-217ENST00000486960 CCDC150Q8NCX0 1101 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 ADCY4Q8NFM4 1077 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 NFKBIDQ8NI38 313 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 ZNF671Q8TAW3 534 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 RHBDD1Q8TEB9 315 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 MRPS27Q92552 414 aaKnown RBP5.63□□□□□ -1.51
SF1-217ENST00000486960 SYN2Q92777 582 aaPredicted RBP5.63□□□□□ -1.51
SF1-217ENST00000486960 LENG1Q96BZ8 264 aaPredicted RBP5.63□□□□□ -1.51
SF1-217ENST00000486960 FAM89AQ96GI7 184 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 TRAPPC9Q96Q05 1148 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 ABHD1Q96SE0 405 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 ZSCAN10Q96SZ4 725 aaPredicted RBP5.63□□□□□ -1.51
SF1-217ENST00000486960 BOCQ9BWV1 1114 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 CARD6Q9BX69 1037 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 HEMGNQ9BXL5 484 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 ZNF341Q9BYN7 854 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 PCIF1Q9H4Z3 704 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 SYNDIG1Q9H7V2 258 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 COQ10BQ9H8M1 238 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 SP110Q9HB58 689 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 WDR6Q9NNW5 1121 aaKnown RBP5.63□□□□□ -1.51
SF1-217ENST00000486960 PARD6AQ9NPB6 346 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 GIMAP4Q9NUV9 329 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 NDFIP2Q9NV92 336 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 PLA2G3Q9NZ20 509 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 CD300AQ9UGN4 299 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 IPO11Q9UI26 975 aaKnown RBP5.63□□□□□ -1.51
SF1-217ENST00000486960 VAV3Q9UKW4 847 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 PCDHA4Q9UN74 947 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 SNX6Q9UNH7 406 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 ZNF451Q9Y4E5 1061 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 TRPV2Q9Y5S1 764 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 ZHX2Q9Y6X8 837 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 CACNA1FO60840 1977 aa5.63□□□□□ -1.51
SF1-217ENST00000486960 TRIP12Q14669 1992 aaPredicted RBP5.62□□□□□ -1.51
SF1-217ENST00000486960 IQANK1A0A1B0GTG1 560 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 SLC9B1P1A6NJY1 282 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 NEURL1BA8MQ27 555 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 DCDC2CA8MYV0 355 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 MYO1GB0I1T2 1018 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 H0Y8G0 127 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 GOLGA6L19H0YKK7 550 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 H3BUI4 141 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 TULP2O00295 520 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 KRIT1O00522 736 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 CLEC3AO75596 197 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 NDST3O95803 873 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 RPLP2P05387 115 aaKnown RBP5.62□□□□□ -1.51
SF1-217ENST00000486960 IVLP07476 585 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 GALTP07902 379 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 FAM86B2P0C5J1 330 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 CCDC192P0DO97 292 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 KRT3P12035 628 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 CD247P20963 164 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 CHMLP26374 656 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 CORO1AP31146 461 aaKnown RBP5.62□□□□□ -1.51
SF1-217ENST00000486960 TAGLN2P37802 199 aaKnown RBP5.62□□□□□ -1.51
SF1-217ENST00000486960 HARS2P49590 506 aaKnown RBP5.62□□□□□ -1.51
SF1-217ENST00000486960 CLCN4P51793 760 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 PNLIPRP1P54315 467 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 CCL23P55773 120 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 ZNF445P59923 1031 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 STX1BP61266 288 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 B2MP61769 119 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 NKX3-2P78367 333 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 KCNC3Q14003 757 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 CRYMQ14894 314 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 ARHGAP19Q14CB8 494 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 RPS6KA2Q15349 733 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 TBC1D25Q3MII6 688 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 ANKRD20A4Q4UJ75 823 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 SMUG1Q53HV7 270 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 ARHGAP15Q53QZ3 475 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 ANKRD20A8PQ5CZ79 823 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 ANKRD20A2Q5SQ80 823 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 PRAMEF19Q5SWL8 479 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 SPATA46Q5T0L3 261 aa5.62□□□□□ -1.51
SF1-217ENST00000486960 ANKRD20A1Q5TYW2 823 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms