RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 CNTNAP3Q9BZ76 1288 aa12.96□□□□□ -0.33
HDAC6-229ENST00000486665 TM6SF2Q9BZW4 377 aa12.96□□□□□ -0.33
HDAC6-229ENST00000486665 CEP44Q9C0F1 390 aa12.96□□□□□ -0.33
HDAC6-229ENST00000486665 GLOD4Q9HC38 313 aa12.96□□□□□ -0.33
HDAC6-229ENST00000486665 POLR3BQ9NW08 1133 aaPredicted RBP12.96□□□□□ -0.33
HDAC6-229ENST00000486665 FEZ2Q9UHY8 353 aaPredicted RBP12.96□□□□□ -0.33
HDAC6-229ENST00000486665 TRHDEQ9UKU6 1024 aa12.96□□□□□ -0.33
HDAC6-229ENST00000486665 CHD8Q9HCK8 2581 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 DCDC2BA2VCK2 349 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 ADAM23O75077 832 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 STK10O94804 968 aaKnown RBP12.95□□□□□ -0.34
HDAC6-229ENST00000486665 KLF8O95600 359 aaPredicted RBP12.95□□□□□ -0.34
HDAC6-229ENST00000486665 ECEL1O95672 775 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 NFKB1P19838 968 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 CR2P20023 1033 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 GKP32189 559 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 NNMTP40261 264 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 RHOAP61586 193 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 MRPS21P82921 87 aaKnown RBP12.95□□□□□ -0.34
HDAC6-229ENST00000486665 DSC2Q02487 901 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 NSUN2Q08J23 767 aaKnown RBP eCLIP12.95□□□□□ -0.34
HDAC6-229ENST00000486665 SRSF5Q13243 272 aaKnown RBP12.95□□□□□ -0.34
HDAC6-229ENST00000486665 P3H1Q32P28 736 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 HNRNPA1L2Q32P51 320 aaKnown RBP12.95□□□□□ -0.34
HDAC6-229ENST00000486665 FBXO43Q4G163 708 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 CARD16Q5EG05 197 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 C9orf64Q5T6V5 341 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 SERPINA13PQ6UXR4 307 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 Q6ZS52 159 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 Q6ZVU0 165 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 SRLQ86TD4 932 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 METTL3Q86U44 580 aaKnown RBP12.95□□□□□ -0.34
HDAC6-229ENST00000486665 JAMLQ86YT9 394 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 CHPFQ8IZ52 775 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 BBS5Q8N3I7 341 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 PCDH20Q8N6Y1 951 aaKnown RBP12.95□□□□□ -0.34
HDAC6-229ENST00000486665 CCDC89Q8N998 374 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 IL17RCQ8NAC3 791 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 TXNDC5Q8NBS9 432 aaKnown RBP12.95□□□□□ -0.34
HDAC6-229ENST00000486665 CHST14Q8NCH0 376 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 OR2A12Q8NGT7 310 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 OR6K2Q8NGY2 324 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 RPLP0P6Q8NHW5 317 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 ARRDC2Q8TBH0 407 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 GRK7Q8WTQ7 553 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 RUNDC3BQ96NL0 473 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 SEMA3CQ99985 751 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 FERMT1Q9BQL6 677 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 MGME1Q9BQP7 344 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 GORASP1Q9BQQ3 440 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 TRIM51Q9BSJ1 452 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 LRRC1Q9BTT6 524 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 NOD2Q9HC29 1040 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 MRPS17Q9Y2R5 130 aaKnown RBP12.95□□□□□ -0.34
HDAC6-229ENST00000486665 TTLL3Q9Y4R7 772 aa12.95□□□□□ -0.34
HDAC6-229ENST00000486665 RIOK3O14730 519 aaKnown RBP12.94□□□□□ -0.34
HDAC6-229ENST00000486665 NPC1O15118 1278 aa12.94□□□□□ -0.34
HDAC6-229ENST00000486665 BNIP3LO60238 219 aa12.94□□□□□ -0.34
HDAC6-229ENST00000486665 OPHN1O60890 802 aa12.94□□□□□ -0.34
HDAC6-229ENST00000486665 SIN3BO75182 1162 aa12.94□□□□□ -0.34
HDAC6-229ENST00000486665 ZNF189O75820 626 aaPredicted RBP12.94□□□□□ -0.34
HDAC6-229ENST00000486665 NEBLO76041 1014 aa12.94□□□□□ -0.34
HDAC6-229ENST00000486665 GSRP00390 522 aa12.94□□□□□ -0.34
HDAC6-229ENST00000486665 MMP2P08253 660 aa12.94□□□□□ -0.34
HDAC6-229ENST00000486665 PSMB4P28070 264 aa12.94□□□□□ -0.34
HDAC6-229ENST00000486665 NTSR1P30989 418 aa12.94□□□□□ -0.34
HDAC6-229ENST00000486665 VPS41P49754 854 aa12.94□□□□□ -0.34
HDAC6-229ENST00000486665 SCNN1BP51168 640 aa12.94□□□□□ -0.34
HDAC6-229ENST00000486665 PTK6Q13882 451 aa12.94□□□□□ -0.34
HDAC6-229ENST00000486665 DHX34Q14147 1143 aaKnown RBP12.94□□□□□ -0.34
HDAC6-229ENST00000486665 PPP1R7Q15435 360 aa12.94□□□□□ -0.34
HDAC6-229ENST00000486665 MYLK3Q32MK0 819 aa12.94□□□□□ -0.34
HDAC6-229ENST00000486665 FAXCQ5TGI0 409 aa12.94□□□□□ -0.34
HDAC6-229ENST00000486665 NCEH1Q6PIU2 408 aa12.94□□□□□ -0.34
HDAC6-229ENST00000486665 DPY19L3Q6ZPD9 716 aa12.94□□□□□ -0.34
HDAC6-229ENST00000486665 ARHGEF18Q6ZSZ5 1173 aa12.94□□□□□ -0.34
HDAC6-229ENST00000486665 PRPF39Q86UA1 669 aaKnown RBP12.94□□□□□ -0.34
HDAC6-229ENST00000486665 OR2AP1Q8NGE2 309 aa12.94□□□□□ -0.34
HDAC6-229ENST00000486665 SPATA22Q8NHS9 363 aa12.94□□□□□ -0.34
HDAC6-229ENST00000486665 CCDC26Q8TAB7 109 aa12.94□□□□□ -0.34
HDAC6-229ENST00000486665 FCRL5Q96RD9 977 aa12.94□□□□□ -0.34
HDAC6-229ENST00000486665 NUDCD1Q96RS6 583 aa12.94□□□□□ -0.34
HDAC6-229ENST00000486665 GABRG3Q99928 467 aa12.94□□□□□ -0.34
HDAC6-229ENST00000486665 SLC25A51Q9H1U9 297 aa12.94□□□□□ -0.34
HDAC6-229ENST00000486665 ETNK1Q9HBU6 452 aa12.94□□□□□ -0.34
HDAC6-229ENST00000486665 PCDH9Q9HC56 1237 aa12.94□□□□□ -0.34
HDAC6-229ENST00000486665 PRSS16Q9NQE7 514 aa12.94□□□□□ -0.34
HDAC6-229ENST00000486665 PAK5Q9P286 719 aa12.94□□□□□ -0.34
HDAC6-229ENST00000486665 HECAQ9UBI9 543 aaPredicted RBP12.94□□□□□ -0.34
HDAC6-229ENST00000486665 SUN2Q9UH99 717 aa12.94□□□□□ -0.34
HDAC6-229ENST00000486665 RSPH14Q9UHP6 348 aa12.94□□□□□ -0.34
HDAC6-229ENST00000486665 EVLQ9UI08 416 aaPredicted RBP12.94□□□□□ -0.34
HDAC6-229ENST00000486665 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.94□□□□□ -0.34
HDAC6-229ENST00000486665 RALGAPA1Q6GYQ0 2036 aa12.94□□□□□ -0.34
HDAC6-229ENST00000486665 SHROOM3Q8TF72 1996 aa12.94□□□□□ -0.34
HDAC6-229ENST00000486665 MAP1BP46821 2468 aaKnown RBP12.94□□□□□ -0.34
HDAC6-229ENST00000486665 EDDM13A0A1B0GTR0 161 aa12.93□□□□□ -0.34
HDAC6-229ENST00000486665 A0A1W2PQF6 199 aa12.93□□□□□ -0.34
HDAC6-229ENST00000486665 TARSL2A2RTX5 802 aaKnown RBP12.93□□□□□ -0.34
HDAC6-229ENST00000486665 FAM187AA6NFU0 413 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms