RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 PRAMEF11O60813 436 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 CYP1A2P05177 515 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 ITGAVP06756 1048 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 FTH1P19P0C7X4 201 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 PAPOLAP51003 745 aaKnown RBP13.07□□□□□ -0.32
CHMP3-208ENST00000486404 FAM193AP78312 1265 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 DPYSL2Q16555 572 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 HADHQ16836 314 aaKnown RBP13.07□□□□□ -0.32
CHMP3-208ENST00000486404 ZNF284Q2VY69 593 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 BOLA3Q53S33 107 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 SEL1L3Q68CR1 1132 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 TMCO3Q6UWJ1 677 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 CYP4V2Q6ZWL3 525 aaPredicted RBP13.07□□□□□ -0.32
CHMP3-208ENST00000486404 PTAR1Q7Z6K3 402 aaPredicted RBP13.07□□□□□ -0.32
CHMP3-208ENST00000486404 VSTM4Q8IW00 320 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 NIPA2Q8N8Q9 360 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 NETO2Q8NC67 525 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 OR8K1Q8NGG5 319 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 KLHDC7BQ96G42 594 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 FEM1CQ96JP0 617 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 BTBD6Q96KE9 485 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 CNTNAP3BQ96NU0 1288 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 DNAJC7Q99615 494 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 ANP32EQ9BTT0 268 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 CINPQ9BW66 212 aaPredicted RBP13.07□□□□□ -0.32
CHMP3-208ENST00000486404 CALN1Q9BXU9 219 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 CNTNAP3Q9BZ76 1288 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 LRRC19Q9H756 370 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 FZD3Q9NPG1 666 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 FTSJ1Q9UET6 329 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 CA5BQ9Y2D0 317 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 FADS3Q9Y5Q0 445 aa13.07□□□□□ -0.32
CHMP3-208ENST00000486404 TDRD6O60522 2096 aaKnown RBP13.07□□□□□ -0.32
CHMP3-208ENST00000486404 TPRP12270 2363 aaKnown RBP13.06□□□□□ -0.32
CHMP3-208ENST00000486404 A6NNZ2 444 aa13.06□□□□□ -0.32
CHMP3-208ENST00000486404 TSPAN6O43657 245 aa13.06□□□□□ -0.32
CHMP3-208ENST00000486404 MFAP3LO75121 409 aa13.06□□□□□ -0.32
CHMP3-208ENST00000486404 PALMO75781 387 aa13.06□□□□□ -0.32
CHMP3-208ENST00000486404 THEGLP0DJG4 465 aa13.06□□□□□ -0.32
CHMP3-208ENST00000486404 EPHA8P29322 1005 aaPredicted RBP13.06□□□□□ -0.32
CHMP3-208ENST00000486404 HNRNPH3P31942 346 aaKnown RBP13.06□□□□□ -0.32
CHMP3-208ENST00000486404 SERPINB6P35237 376 aa13.06□□□□□ -0.32
CHMP3-208ENST00000486404 ABL2P42684 1182 aa13.06□□□□□ -0.32
CHMP3-208ENST00000486404 HCAR3P49019 387 aa13.06□□□□□ -0.32
CHMP3-208ENST00000486404 SGCGQ13326 291 aa13.06□□□□□ -0.32
CHMP3-208ENST00000486404 DPYSQ14117 519 aa13.06□□□□□ -0.32
CHMP3-208ENST00000486404 GRM3Q14832 879 aa13.06□□□□□ -0.32
CHMP3-208ENST00000486404 SLC18A3Q16572 532 aa13.06□□□□□ -0.32
CHMP3-208ENST00000486404 LRRC73Q5JTD7 316 aa13.06□□□□□ -0.32
CHMP3-208ENST00000486404 PRAMEF14Q5SWL7 426 aa13.06□□□□□ -0.32
CHMP3-208ENST00000486404 GATAD2AQ86YP4 633 aa13.06□□□□□ -0.32
CHMP3-208ENST00000486404 ATPAF2Q8N5M1 289 aa13.06□□□□□ -0.32
CHMP3-208ENST00000486404 LZTR1Q8N653 840 aa13.06□□□□□ -0.32
CHMP3-208ENST00000486404 NPWQ8N729 165 aa13.06□□□□□ -0.32
CHMP3-208ENST00000486404 CXorf40AQ8TE69 158 aa13.06□□□□□ -0.32
CHMP3-208ENST00000486404 TEKT4Q8WW24 435 aa13.06□□□□□ -0.32
CHMP3-208ENST00000486404 SLC39A8Q9C0K1 460 aa13.06□□□□□ -0.32
CHMP3-208ENST00000486404 PDFQ9HBH1 243 aa13.06□□□□□ -0.32
CHMP3-208ENST00000486404 ABHD10Q9NUJ1 306 aa13.06□□□□□ -0.32
CHMP3-208ENST00000486404 CWC15Q9P013 229 aaKnown RBP13.06□□□□□ -0.32
CHMP3-208ENST00000486404 LHX3Q9UBR4 397 aa13.06□□□□□ -0.32
CHMP3-208ENST00000486404 LCMT1Q9UIC8 334 aa13.06□□□□□ -0.32
CHMP3-208ENST00000486404 ITM2BQ9Y287 266 aa13.06□□□□□ -0.32
CHMP3-208ENST00000486404 BTBD3Q9Y2F9 522 aa13.06□□□□□ -0.32
CHMP3-208ENST00000486404 GOLGA8CPA6NN73 597 aa13.05□□□□□ -0.32
CHMP3-208ENST00000486404 J3KR12 359 aa13.05□□□□□ -0.32
CHMP3-208ENST00000486404 HYAL3O43820 417 aaPredicted RBP13.05□□□□□ -0.32
CHMP3-208ENST00000486404 CBFA2T3O75081 653 aa13.05□□□□□ -0.32
CHMP3-208ENST00000486404 PIGNO95427 931 aa13.05□□□□□ -0.32
CHMP3-208ENST00000486404 H2AFZP0C0S5 128 aa13.05□□□□□ -0.32
CHMP3-208ENST00000486404 RARAP10276 462 aa13.05□□□□□ -0.32
CHMP3-208ENST00000486404 TCF4P15884 667 aa13.05□□□□□ -0.32
CHMP3-208ENST00000486404 SPINK2P20155 84 aa13.05□□□□□ -0.32
CHMP3-208ENST00000486404 IL1R2P27930 398 aa13.05□□□□□ -0.32
CHMP3-208ENST00000486404 CDH6P55285 790 aa13.05□□□□□ -0.32
CHMP3-208ENST00000486404 SLC25A11Q02978 314 aaKnown RBP13.05□□□□□ -0.32
CHMP3-208ENST00000486404 ZNF235Q14590 738 aa13.05□□□□□ -0.32
CHMP3-208ENST00000486404 TMEM259Q4ZIN3 620 aa13.05□□□□□ -0.32
CHMP3-208ENST00000486404 CCDC157Q569K6 752 aa13.05□□□□□ -0.32
CHMP3-208ENST00000486404 ZFYVE27Q5T4F4 411 aa13.05□□□□□ -0.32
CHMP3-208ENST00000486404 H2AFVQ71UI9 128 aa13.05□□□□□ -0.32
CHMP3-208ENST00000486404 TTC7BQ86TV6 843 aa13.05□□□□□ -0.32
CHMP3-208ENST00000486404 CNGA4Q8IV77 575 aa13.05□□□□□ -0.32
CHMP3-208ENST00000486404 TMEM145Q8NBT3 493 aa13.05□□□□□ -0.32
CHMP3-208ENST00000486404 SCNM1Q9BWG6 230 aa13.05□□□□□ -0.32
CHMP3-208ENST00000486404 C1QTNF7Q9BXJ2 289 aa13.05□□□□□ -0.32
CHMP3-208ENST00000486404 SLC17A9Q9BYT1 436 aa13.05□□□□□ -0.32
CHMP3-208ENST00000486404 ATP13A3Q9H7F0 1226 aa13.05□□□□□ -0.32
CHMP3-208ENST00000486404 ERVMER34-1Q9H9K5 563 aa13.05□□□□□ -0.32
CHMP3-208ENST00000486404 UVRAGQ9P2Y5 699 aa13.05□□□□□ -0.32
CHMP3-208ENST00000486404 ZFR2Q9UPR6 939 aaKnown RBP13.05□□□□□ -0.32
CHMP3-208ENST00000486404 MAP1BP46821 2468 aaKnown RBP13.05□□□□□ -0.32
CHMP3-208ENST00000486404 PTPRBP23467 1997 aa13.05□□□□□ -0.32
CHMP3-208ENST00000486404 SSU72P8A0A1W2PR75 194 aa13.04□□□□□ -0.32
CHMP3-208ENST00000486404 TMEM110-MUSTN1A8MSY1 372 aa13.04□□□□□ -0.32
CHMP3-208ENST00000486404 SERPINA4P29622 427 aa13.04□□□□□ -0.32
CHMP3-208ENST00000486404 CLDN2P57739 230 aa13.04□□□□□ -0.32
CHMP3-208ENST00000486404 IL10RBQ08334 325 aa13.04□□□□□ -0.32
CHMP3-208ENST00000486404 ELP6Q0PNE2 266 aa13.04□□□□□ -0.32
CHMP3-208ENST00000486404 RFTN1Q14699 578 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms