RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 CENPAP49450 140 aa4.05□□□□□ -1.76
GCFC2-209ENST00000486016 BYSLQ13895 437 aaKnown RBP4.05□□□□□ -1.76
GCFC2-209ENST00000486016 PUM3Q15397 648 aaKnown RBP4.05□□□□□ -1.76
GCFC2-209ENST00000486016 SULT6B1Q6IMI4 303 aa4.05□□□□□ -1.76
GCFC2-209ENST00000486016 CCDC117Q8IWD4 279 aaPredicted RBP4.05□□□□□ -1.76
GCFC2-209ENST00000486016 ATG16L2Q8NAA4 619 aa4.05□□□□□ -1.76
GCFC2-209ENST00000486016 TBC1D22AQ8WUA7 517 aa4.05□□□□□ -1.76
GCFC2-209ENST00000486016 TAF15Q92804 592 aaKnown RBP eCLIP4.05□□□□□ -1.76
GCFC2-209ENST00000486016 KTI12Q96EK9 354 aaPredicted RBP4.05□□□□□ -1.76
GCFC2-209ENST00000486016 TRAPPC9Q96Q05 1148 aa4.05□□□□□ -1.76
GCFC2-209ENST00000486016 G6PC2Q9NQR9 355 aa4.05□□□□□ -1.76
GCFC2-209ENST00000486016 TLR8Q9NR97 1041 aaKnown RBP4.05□□□□□ -1.76
GCFC2-209ENST00000486016 DHDHQ9UQ10 334 aa4.05□□□□□ -1.76
GCFC2-209ENST00000486016 STRNO43815 780 aa4.04□□□□□ -1.76
GCFC2-209ENST00000486016 XPNPEP2O43895 674 aa4.04□□□□□ -1.76
GCFC2-209ENST00000486016 PMS2P2O95744 297 aa4.04□□□□□ -1.76
GCFC2-209ENST00000486016 AMD1P17707 334 aa4.04□□□□□ -1.76
GCFC2-209ENST00000486016 CTPS1P17812 591 aa4.04□□□□□ -1.76
GCFC2-209ENST00000486016 MYF6P23409 242 aa4.04□□□□□ -1.76
GCFC2-209ENST00000486016 TTKP33981 857 aa4.04□□□□□ -1.76
GCFC2-209ENST00000486016 RPL3P39023 403 aaKnown RBP4.04□□□□□ -1.76
GCFC2-209ENST00000486016 PEX5P50542 639 aa4.04□□□□□ -1.76
GCFC2-209ENST00000486016 CRIP2P52943 208 aaPredicted RBP4.04□□□□□ -1.76
GCFC2-209ENST00000486016 ARHGAP8P85298 464 aa4.04□□□□□ -1.76
GCFC2-209ENST00000486016 IL13RA2Q14627 380 aa4.04□□□□□ -1.76
GCFC2-209ENST00000486016 ME3Q16798 604 aa4.04□□□□□ -1.76
GCFC2-209ENST00000486016 AP5B1Q2VPB7 878 aa4.04□□□□□ -1.76
GCFC2-209ENST00000486016 STPG1Q5TH74 334 aa4.04□□□□□ -1.76
GCFC2-209ENST00000486016 SYNE3Q6ZMZ3 975 aa4.04□□□□□ -1.76
GCFC2-209ENST00000486016 TUBA1AQ71U36 451 aa4.04□□□□□ -1.76
GCFC2-209ENST00000486016 SYT13Q7L8C5 426 aa4.04□□□□□ -1.76
GCFC2-209ENST00000486016 LMNTD1Q8N9Z9 388 aa4.04□□□□□ -1.76
GCFC2-209ENST00000486016 FSIP1Q8NA03 581 aa4.04□□□□□ -1.76
GCFC2-209ENST00000486016 TRIB2Q92519 343 aa4.04□□□□□ -1.76
GCFC2-209ENST00000486016 ZNF385AQ96PM9 386 aaKnown RBP4.04□□□□□ -1.76
GCFC2-209ENST00000486016 RMDN3Q96TC7 470 aa4.04□□□□□ -1.76
GCFC2-209ENST00000486016 TUBA1CQ9BQE3 449 aa4.04□□□□□ -1.76
GCFC2-209ENST00000486016 MMP28Q9H239 520 aa4.04□□□□□ -1.76
GCFC2-209ENST00000486016 EVA1AQ9H8M9 152 aa4.04□□□□□ -1.76
GCFC2-209ENST00000486016 EBF2Q9HAK2 575 aa4.04□□□□□ -1.76
GCFC2-209ENST00000486016 E7EVH7 732 aa4.03□□□□□ -1.76
GCFC2-209ENST00000486016 GAGE7O76087 117 aa4.03□□□□□ -1.76
GCFC2-209ENST00000486016 GAGE12FP0CL80 117 aa4.03□□□□□ -1.76
GCFC2-209ENST00000486016 GAGE12GP0CL81 117 aa4.03□□□□□ -1.76
GCFC2-209ENST00000486016 GAGE12IP0CL82 117 aa4.03□□□□□ -1.76
GCFC2-209ENST00000486016 ANOS1P23352 680 aa4.03□□□□□ -1.76
GCFC2-209ENST00000486016 DGKAP23743 735 aa4.03□□□□□ -1.76
GCFC2-209ENST00000486016 CXCR3P49682 368 aa4.03□□□□□ -1.76
GCFC2-209ENST00000486016 TNFAIP2Q03169 654 aa4.03□□□□□ -1.76
GCFC2-209ENST00000486016 FOXO1Q12778 655 aa4.03□□□□□ -1.76
GCFC2-209ENST00000486016 GAGE1Q13065 139 aa4.03□□□□□ -1.76
GCFC2-209ENST00000486016 GAGE4Q13068 117 aa4.03□□□□□ -1.76
GCFC2-209ENST00000486016 DCAF6Q58WW2 860 aa4.03□□□□□ -1.76
GCFC2-209ENST00000486016 ADAM5Q6NVV9 412 aa4.03□□□□□ -1.76
GCFC2-209ENST00000486016 GJB7Q6PEY0 223 aa4.03□□□□□ -1.76
GCFC2-209ENST00000486016 TOGARAM2Q6ZUX3 1019 aa4.03□□□□□ -1.76
GCFC2-209ENST00000486016 MARK2Q7KZI7 788 aaKnown RBP4.03□□□□□ -1.76
GCFC2-209ENST00000486016 DENND6AQ8IWF6 608 aa4.03□□□□□ -1.76
GCFC2-209ENST00000486016 GALNT15Q8N3T1 639 aa4.03□□□□□ -1.76
GCFC2-209ENST00000486016 ZMIZ2Q8NF64 920 aa4.03□□□□□ -1.76
GCFC2-209ENST00000486016 SVIPQ8NHG7 77 aa4.03□□□□□ -1.76
GCFC2-209ENST00000486016 KRTAP4-3Q9BYR4 195 aa4.03□□□□□ -1.76
GCFC2-209ENST00000486016 IGHV4OR15-8A0A075B7B6 117 aa4.02□□□□□ -1.77
GCFC2-209ENST00000486016 CLGNO14967 610 aa4.02□□□□□ -1.77
GCFC2-209ENST00000486016 CBX6O95503 412 aa4.02□□□□□ -1.77
GCFC2-209ENST00000486016 SERPINC1P01008 464 aa4.02□□□□□ -1.77
GCFC2-209ENST00000486016 CFC1BP0CG36 223 aa4.02□□□□□ -1.77
GCFC2-209ENST00000486016 CFC1P0CG37 223 aa4.02□□□□□ -1.77
GCFC2-209ENST00000486016 CAPSQ13938 189 aa4.02□□□□□ -1.77
GCFC2-209ENST00000486016 RBBP5Q15291 538 aaKnown RBP4.02□□□□□ -1.77
GCFC2-209ENST00000486016 FBXO43Q4G163 708 aa4.02□□□□□ -1.77
GCFC2-209ENST00000486016 PLEKHO1Q53GL0 409 aaPredicted RBP4.02□□□□□ -1.77
GCFC2-209ENST00000486016 RUNDC3AQ59EK9 446 aa4.02□□□□□ -1.77
GCFC2-209ENST00000486016 ZNF484Q5JVG2 852 aa4.02□□□□□ -1.77
GCFC2-209ENST00000486016 SH2D4BQ5SQS7 431 aa4.02□□□□□ -1.77
GCFC2-209ENST00000486016 CEP85LQ5SZL2 805 aa4.02□□□□□ -1.77
GCFC2-209ENST00000486016 UNQ6126/PRO20091Q6UXV3 157 aa4.02□□□□□ -1.77
GCFC2-209ENST00000486016 FOXL2NBQ6ZUU3 175 aa4.02□□□□□ -1.77
GCFC2-209ENST00000486016 NEK10Q6ZWH5 1172 aa4.02□□□□□ -1.77
GCFC2-209ENST00000486016 MON1AQ86VX9 555 aa4.02□□□□□ -1.77
GCFC2-209ENST00000486016 MB21D2Q8IYB1 491 aaPredicted RBP4.02□□□□□ -1.77
GCFC2-209ENST00000486016 CACNA2D3Q8IZS8 1091 aa4.02□□□□□ -1.77
GCFC2-209ENST00000486016 RASSF8Q8NHQ8 419 aa4.02□□□□□ -1.77
GCFC2-209ENST00000486016 NCSTNQ92542 709 aa4.02□□□□□ -1.77
GCFC2-209ENST00000486016 LRFN5Q96NI6 719 aa4.02□□□□□ -1.77
GCFC2-209ENST00000486016 TWSG1Q9GZX9 223 aa4.02□□□□□ -1.77
GCFC2-209ENST00000486016 ANKRD10Q9NXR5 420 aa4.02□□□□□ -1.77
GCFC2-209ENST00000486016 DACT1Q9NYF0 836 aa4.02□□□□□ -1.77
GCFC2-209ENST00000486016 OR6C3Q9NZP0 311 aa4.02□□□□□ -1.77
GCFC2-209ENST00000486016 CD207Q9UJ71 328 aa4.02□□□□□ -1.77
GCFC2-209ENST00000486016 SNED1Q8TER0 1413 aa4.02□□□□□ -1.77
GCFC2-209ENST00000486016 WNT9BO14905 357 aa4.01□□□□□ -1.77
GCFC2-209ENST00000486016 PPM1GO15355 546 aaPredicted RBP4.01□□□□□ -1.77
GCFC2-209ENST00000486016 CST5P28325 142 aaPredicted RBP4.01□□□□□ -1.77
GCFC2-209ENST00000486016 TROAPQ12815 778 aa4.01□□□□□ -1.77
GCFC2-209ENST00000486016 PMS2CLQ68D20 193 aa4.01□□□□□ -1.77
GCFC2-209ENST00000486016 NAPEPLDQ6IQ20 393 aa4.01□□□□□ -1.77
GCFC2-209ENST00000486016 KLHL24Q6TFL4 600 aa4.01□□□□□ -1.77
GCFC2-209ENST00000486016 ZNF441Q8N8Z8 693 aa4.01□□□□□ -1.77
GCFC2-209ENST00000486016 NEK9Q8TD19 979 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms